cellestial 0.48.3__tar.gz → 0.48.4__tar.gz

{cellestial-0.48.3 → cellestial-0.48.4}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: cellestial
-Version: 0.48.3
+Version: 0.48.4
 Summary: 
 License-Expression: Apache-2.0
 License-File: LICENSE

{cellestial-0.48.3 → cellestial-0.48.4}/cellestial/datasets/datasets.py

@@ -165,7 +165,7 @@ def pbmc3k(
     bring: bool = True,
 ) -> AnnData:
     """
-    Download and preprocess the pbmc3k dataset.
+    Download, preprocess, and load the pbmc3k dataset.
 
     Parameters
     ----------
@@ -338,7 +338,7 @@ def pancreas(
     bring: bool = True,
 ) -> AnnData:
     """
-    Download and preprocess the endocrinogenesis day-15 pancreas dataset.
+    Download, preprocess, and load the endocrinogenesis day-15 pancreas dataset.
 
     Parameters
     ----------
@@ -430,7 +430,7 @@ def from_url(
     bring: bool = True,
 ) -> AnnData:
     """
-    Download an `.h5ad` dataset from a direct HTTP(S) URL.
+    Download and load an `.h5ad` dataset from a direct HTTP(S) URL.
 
     Parameters
     ----------
@@ -532,7 +532,7 @@ def from_cellxgene(
     bring: bool = True,
 ) -> AnnData:
     """
-    Download a dataset from CELLxGENE by URL or UUID.
+    Download and load a dataset from CELLxGENE by URL or UUID.
 
     Parameters
     ----------
@@ -600,7 +600,7 @@ def breast_cancer_atlas(
     bring: bool = True,
 ) -> AnnData:
     """
-    Download the breast cancer cell atlas from CELLxGENE.
+    Download and load the breast cancer cell atlas from CELLxGENE.
 
     Parameters
     ----------
@@ -644,7 +644,7 @@ def human_lymph_node(
     bring: bool = True,
 ) -> AnnData:
     """
-    Download and preprocess the V1 Human Lymph Node Visium spatial dataset.
+    Download, preprocess, and load the V1 Human Lymph Node Visium spatial dataset.
 
     Parameters
     ----------

{cellestial-0.48.3 → cellestial-0.48.4}/cellestial/layers/outline.py

@@ -37,6 +37,16 @@ def _get_density_boundaries(
     else:
         groups = [[g] if isinstance(g, str) else list(g) for g in groups]
 
+    requested = {g for group in groups for g in group}
+    available = set(frame.get_column(group_by).unique().to_list())
+    missing = requested - available
+    if missing:
+        msg = (
+            f"Groups {sorted(missing)} not found in column '{group_by}'. "
+            f"Available groups: {sorted(available)}."
+        )
+        raise ValueError(msg)
+
     boundaries = []
     for group in groups:
         group_label = "+".join(group) if len(group) > 1 else group[0]
@@ -83,7 +93,7 @@ def _get_density_boundaries(
     if not boundaries:
         msg = (
             "No cluster outline could be computed. "
-            "Check that `groups` exist in `group_by` and have at least 5 points."
+            "Requested groups exist but have fewer than 5 points each."
         )
         raise ValueError(msg)
 

{cellestial-0.48.3 → cellestial-0.48.4}/pyproject.toml

@@ -1,6 +1,6 @@
 [project]
 name = "cellestial"
-version = "0.48.3"
+version = "0.48.4"
 description = ""
 authors = [
     { name = "Zaf4", email = "zafermolbio@gmail.com" },