celldetective 1.5.0b3__tar.gz → 1.5.0b8__tar.gz

{celldetective-1.5.0b3 → celldetective-1.5.0b8}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: celldetective
-Version: 1.5.0b3
+Version: 1.5.0b8
 Summary: description
 Home-page: http://github.com/remyeltorro/celldetective
 Author: Rémy Torro
@@ -15,11 +15,8 @@ Requires-Dist: sphinx_rtd_theme
 Requires-Dist: sphinx
 Requires-Dist: jinja2
 Requires-Dist: ipykernel
-Requires-Dist: stardist
-Requires-Dist: cellpose<3
 Requires-Dist: scikit-learn
 Requires-Dist: btrack
-Requires-Dist: tensorflow~=2.15.0
 Requires-Dist: napari<0.6.0
 Requires-Dist: tqdm
 Requires-Dist: mahotas
@@ -48,6 +45,15 @@ Requires-Dist: prettyprint
 Requires-Dist: pandas
 Requires-Dist: matplotlib
 Requires-Dist: prettytable
+Requires-Dist: scikit-image
+Requires-Dist: natsort
+Provides-Extra: tensorflow
+Requires-Dist: tensorflow~=2.15.0; extra == "tensorflow"
+Requires-Dist: stardist; extra == "tensorflow"
+Provides-Extra: all
+Requires-Dist: cellpose<3; extra == "all"
+Requires-Dist: stardist; extra == "all"
+Requires-Dist: tensorflow~=2.15.0; extra == "all"
 Dynamic: author
 Dynamic: author-email
 Dynamic: description
@@ -55,6 +61,7 @@ Dynamic: description-content-type
 Dynamic: home-page
 Dynamic: license
 Dynamic: license-file
+Dynamic: provides-extra
 Dynamic: requires-dist
 Dynamic: summary
 
@@ -148,10 +155,12 @@ To use the software, you must install python, *e.g.* through
 
 Celldetective requires a version of Python between 3.9 and 3.11 (included). If your Python version is older or more recent, consider using `conda` to create an environment as described below.
 
-With the proper Python version, Celldetective can be directly installed with `pip`:
+With the proper Python version, Celldetective can be directly installed with `pip`.
+**Important**: By default, `pip install celldetective` will **not** install deep-learning libraries (`tensorflow`, `cellpose`, `stardist`) to allow users to manage their own GPU environment (e.g. `torch`, `cuda`).
 
+If you want the standard full installation (recommended for most users), use:
 ``` bash
-pip install celldetective
+pip install celldetective[all]
 ```
 
 We recommend that you create an environment to use Celldetective, to protect your package versions and fix the Python version *e.g.*
@@ -160,7 +169,7 @@ with `conda`:
 ``` bash
 conda create -n celldetective python=3.11 pyqt
 conda activate celldetective
-pip install celldetective
+pip install celldetective[all]
 ```
 
 Need an update? Simply type the following in the terminal (in your

{celldetective-1.5.0b3 → celldetective-1.5.0b8}/README.md

@@ -88,10 +88,12 @@ To use the software, you must install python, *e.g.* through
 
 Celldetective requires a version of Python between 3.9 and 3.11 (included). If your Python version is older or more recent, consider using `conda` to create an environment as described below.
 
-With the proper Python version, Celldetective can be directly installed with `pip`:
+With the proper Python version, Celldetective can be directly installed with `pip`.
+**Important**: By default, `pip install celldetective` will **not** install deep-learning libraries (`tensorflow`, `cellpose`, `stardist`) to allow users to manage their own GPU environment (e.g. `torch`, `cuda`).
 
+If you want the standard full installation (recommended for most users), use:
 ``` bash
-pip install celldetective
+pip install celldetective[all]
 ```
 
 We recommend that you create an environment to use Celldetective, to protect your package versions and fix the Python version *e.g.*
@@ -100,7 +102,7 @@ with `conda`:
 ``` bash
 conda create -n celldetective python=3.11 pyqt
 conda activate celldetective
-pip install celldetective
+pip install celldetective[all]
 ```
 
 Need an update? Simply type the following in the terminal (in your

celldetective-1.5.0b8/celldetective/_version.py

@@ -0,0 +1 @@
+__version__ = "1.5.0b8"