celldetective 1.5.0b13__tar.gz → 1.5.0b14__tar.gz

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Files changed (207) hide show
  1. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/PKG-INFO +1 -1
  2. celldetective-1.5.0b14/celldetective/_version.py +1 -0
  3. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/layouts/local_correction_layout.py +3 -1
  4. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/viewers/contour_viewer.py +6 -1
  5. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective.egg-info/PKG-INFO +1 -1
  6. celldetective-1.5.0b13/celldetective/_version.py +0 -1
  7. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/LICENSE +0 -0
  8. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/README.md +0 -0
  9. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/__init__.py +0 -0
  10. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/__main__.py +0 -0
  11. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/datasets/segmentation_annotations/blank +0 -0
  12. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/datasets/signal_annotations/blank +0 -0
  13. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/event_detection_models.py +0 -0
  14. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/events.py +0 -0
  15. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/exceptions.py +0 -0
  16. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/extra_properties.py +0 -0
  17. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/filters.py +0 -0
  18. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/InitWindow.py +0 -0
  19. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/__init__.py +0 -0
  20. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/about.py +0 -0
  21. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/analyze_block.py +0 -0
  22. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/base/__init__.py +0 -0
  23. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/base/channel_norm_generator.py +0 -0
  24. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/base/components.py +0 -0
  25. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/base/feature_choice.py +0 -0
  26. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/base/figure_canvas.py +0 -0
  27. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/base/list_widget.py +0 -0
  28. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/base/styles.py +0 -0
  29. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/base/utils.py +0 -0
  30. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/base_annotator.py +0 -0
  31. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/classifier_widget.py +0 -0
  32. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/configure_new_exp.py +0 -0
  33. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/control_panel.py +0 -0
  34. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/dynamic_progress.py +0 -0
  35. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/event_annotator.py +0 -0
  36. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/generic_signal_plot.py +0 -0
  37. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/gui_utils.py +0 -0
  38. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/help/DL-segmentation-strategy.json +0 -0
  39. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/help/Threshold-vs-DL.json +0 -0
  40. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/help/cell-populations.json +0 -0
  41. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/help/exp-structure.json +0 -0
  42. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/help/feature-btrack.json +0 -0
  43. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/help/neighborhood.json +0 -0
  44. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/help/prefilter-for-segmentation.json +0 -0
  45. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/help/preprocessing.json +0 -0
  46. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/help/propagate-classification.json +0 -0
  47. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/help/track-postprocessing.json +0 -0
  48. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/help/tracking.json +0 -0
  49. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/interactions_block.py +0 -0
  50. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/interactive_timeseries_viewer.py +0 -0
  51. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/json_readers.py +0 -0
  52. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/layouts/__init__.py +0 -0
  53. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/layouts/background_model_free_layout.py +0 -0
  54. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/layouts/channel_offset_layout.py +0 -0
  55. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/layouts/model_fit_layout.py +0 -0
  56. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/layouts/operation_layout.py +0 -0
  57. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/layouts/protocol_designer_layout.py +0 -0
  58. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/measure_annotator.py +0 -0
  59. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/pair_event_annotator.py +0 -0
  60. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/plot_measurements.py +0 -0
  61. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/plot_signals_ui.py +0 -0
  62. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/preprocessing_block.py +0 -0
  63. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/process_block.py +0 -0
  64. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/seg_model_loader.py +0 -0
  65. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/settings/__init__.py +0 -0
  66. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/settings/_cellpose_model_params.py +0 -0
  67. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/settings/_event_detection_model_params.py +0 -0
  68. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/settings/_segmentation_model_params.py +0 -0
  69. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/settings/_settings_base.py +0 -0
  70. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/settings/_settings_event_model_training.py +0 -0
  71. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/settings/_settings_measurements.py +0 -0
  72. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/settings/_settings_neighborhood.py +0 -0
  73. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/settings/_settings_segmentation.py +0 -0
  74. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/settings/_settings_segmentation_model_training.py +0 -0
  75. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/settings/_settings_signal_annotator.py +0 -0
  76. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/settings/_settings_tracking.py +0 -0
  77. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/settings/_stardist_model_params.py +0 -0
  78. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/survival_ui.py +0 -0
  79. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/tableUI.py +0 -0
  80. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/table_ops/__init__.py +0 -0
  81. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/table_ops/_maths.py +0 -0
  82. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/table_ops/_merge_groups.py +0 -0
  83. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/table_ops/_merge_one_hot.py +0 -0
  84. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/table_ops/_query_table.py +0 -0
  85. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/table_ops/_rename_col.py +0 -0
  86. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/thresholds_gui.py +0 -0
  87. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/viewers/__init__.py +0 -0
  88. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/viewers/base_viewer.py +0 -0
  89. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/viewers/channel_offset_viewer.py +0 -0
  90. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/viewers/size_viewer.py +0 -0
  91. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/viewers/spot_detection_viewer.py +0 -0
  92. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/viewers/threshold_viewer.py +0 -0
  93. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/workers.py +0 -0
  94. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/icons/logo-large.png +0 -0
  95. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/icons/logo.png +0 -0
  96. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/icons/signals_icon.png +0 -0
  97. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/icons/splash-test.png +0 -0
  98. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/icons/splash.png +0 -0
  99. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/icons/splash0.png +0 -0
  100. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/icons/survival2.png +0 -0
  101. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/icons/vignette_signals2.png +0 -0
  102. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/icons/vignette_signals2.svg +0 -0
  103. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/links/zenodo.json +0 -0
  104. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/log_manager.py +0 -0
  105. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/measure.py +0 -0
  106. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/models/pair_signal_detection/blank +0 -0
  107. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/models/segmentation_effectors/blank +0 -0
  108. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/models/segmentation_generic/blank +0 -0
  109. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/models/segmentation_targets/blank +0 -0
  110. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/models/signal_detection/blank +0 -0
  111. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/models/tracking_configs/biased_motion.json +0 -0
  112. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/models/tracking_configs/mcf7.json +0 -0
  113. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/models/tracking_configs/no_z_motion.json +0 -0
  114. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/models/tracking_configs/ricm.json +0 -0
  115. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/models/tracking_configs/ricm2.json +0 -0
  116. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/napari/__init__.py +0 -0
  117. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/napari/utils.py +0 -0
  118. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/neighborhood.py +0 -0
  119. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/preprocessing.py +0 -0
  120. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/processes/__init__.py +0 -0
  121. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/processes/background_correction.py +0 -0
  122. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/processes/compute_neighborhood.py +0 -0
  123. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/processes/detect_events.py +0 -0
  124. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/processes/downloader.py +0 -0
  125. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/processes/load_table.py +0 -0
  126. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/processes/measure_cells.py +0 -0
  127. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/processes/segment_cells.py +0 -0
  128. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/processes/track_cells.py +0 -0
  129. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/processes/train_segmentation_model.py +0 -0
  130. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/processes/train_signal_model.py +0 -0
  131. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/processes/unified_process.py +0 -0
  132. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/regionprops/__init__.py +0 -0
  133. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/regionprops/_regionprops.py +0 -0
  134. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/regionprops/props.json +0 -0
  135. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/relative_measurements.py +0 -0
  136. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/scripts/analyze_signals.py +0 -0
  137. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/scripts/measure_cells.py +0 -0
  138. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/scripts/measure_relative.py +0 -0
  139. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/scripts/segment_cells.py +0 -0
  140. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/scripts/segment_cells_thresholds.py +0 -0
  141. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/scripts/track_cells.py +0 -0
  142. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/scripts/train_segmentation_model.py +0 -0
  143. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/scripts/train_signal_model.py +0 -0
  144. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/segmentation.py +0 -0
  145. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/signals.py +0 -0
  146. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/tracking.py +0 -0
  147. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/utils/__init__.py +0 -0
  148. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/utils/cellpose_utils/__init__.py +0 -0
  149. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/utils/color_mappings.py +0 -0
  150. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/utils/data_cleaning.py +0 -0
  151. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/utils/data_loaders.py +0 -0
  152. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/utils/dataset_helpers.py +0 -0
  153. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/utils/downloaders.py +0 -0
  154. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/utils/event_detection/__init__.py +0 -0
  155. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/utils/experiment.py +0 -0
  156. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/utils/image_augmenters.py +0 -0
  157. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/utils/image_cleaning.py +0 -0
  158. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/utils/image_loaders.py +0 -0
  159. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/utils/image_transforms.py +0 -0
  160. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/utils/io.py +0 -0
  161. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/utils/mask_cleaning.py +0 -0
  162. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/utils/mask_transforms.py +0 -0
  163. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/utils/masks.py +0 -0
  164. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/utils/maths.py +0 -0
  165. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/utils/model_getters.py +0 -0
  166. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/utils/model_loaders.py +0 -0
  167. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/utils/normalization.py +0 -0
  168. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/utils/parsing.py +0 -0
  169. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/utils/plots/__init__.py +0 -0
  170. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/utils/plots/regression.py +0 -0
  171. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/utils/resources.py +0 -0
  172. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/utils/stardist_utils/__init__.py +0 -0
  173. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/utils/stats.py +0 -0
  174. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/utils/types.py +0 -0
  175. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective.egg-info/SOURCES.txt +0 -0
  176. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective.egg-info/dependency_links.txt +0 -0
  177. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective.egg-info/entry_points.txt +0 -0
  178. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective.egg-info/not-zip-safe +0 -0
  179. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective.egg-info/requires.txt +0 -0
  180. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective.egg-info/top_level.txt +0 -0
  181. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/setup.cfg +0 -0
  182. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/setup.py +0 -0
  183. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/tests/__init__.py +0 -0
  184. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/tests/gui/__init__.py +0 -0
  185. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/tests/gui/test_classifier_widget.py +0 -0
  186. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/tests/gui/test_enhancements.py +0 -0
  187. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/tests/gui/test_event_annotator_cleanup.py +0 -0
  188. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/tests/gui/test_measure_annotator_bugfix.py +0 -0
  189. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/tests/gui/test_measurement_settings.py +0 -0
  190. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/tests/gui/test_new_project.py +0 -0
  191. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/tests/gui/test_project.py +0 -0
  192. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/tests/gui/test_spot_detection_viewer.py +0 -0
  193. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/tests/gui/test_tableui_track_collapse.py +0 -0
  194. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/tests/test_cellpose_fallback.py +0 -0
  195. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/tests/test_contour_format.py +0 -0
  196. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/tests/test_events.py +0 -0
  197. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/tests/test_filters.py +0 -0
  198. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/tests/test_io.py +0 -0
  199. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/tests/test_measure.py +0 -0
  200. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/tests/test_neighborhood.py +0 -0
  201. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/tests/test_notebooks.py +0 -0
  202. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/tests/test_partial_install.py +0 -0
  203. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/tests/test_preprocessing.py +0 -0
  204. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/tests/test_segmentation.py +0 -0
  205. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/tests/test_signals.py +0 -0
  206. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/tests/test_tracking.py +0 -0
  207. {celldetective-1.5.0b13 → celldetective-1.5.0b14}/tests/test_utils.py +0 -0
{celldetective-1.5.0b13 → celldetective-1.5.0b14}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: celldetective
3
- Version: 1.5.0b13
3
+ Version: 1.5.0b14
4
4
  Summary: description
5
5
  Home-page: http://github.com/remyeltorro/celldetective
6
6
  Author: Rémy Torro
celldetective-1.5.0b14/celldetective/_version.py ADDED
@@ -0,0 +1 @@
1
+ __version__ = "1.5.0b14"
{celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/layouts/local_correction_layout.py RENAMED
@@ -5,6 +5,7 @@ from celldetective import get_logger
5
5
 
6
6
  logger = get_logger(__name__)
7
7
 
8
+
8
9
  class LocalCorrectionLayout(BackgroundFitCorrectionLayout):
9
10
  """docstring for ClassName"""
10
11
 
@@ -57,11 +58,12 @@ class LocalCorrectionLayout(BackgroundFitCorrectionLayout):
57
58
  n_channels=len(self.channel_names),
58
59
  target_channel=self.channels_cb.currentIndex(),
59
60
  edge_range=(0, 30),
60
- initial_edge=int(thresh),
61
+ initial_edge=-int(thresh),
61
62
  invert=True,
62
63
  window_title="Set an edge distance to estimate local intensity",
63
64
  channel_cb=False,
64
65
  PxToUm=1,
66
+ single_value_mode=True,
65
67
  )
66
68
  self.viewer.show()
67
69
 
{celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective/gui/viewers/contour_viewer.py RENAMED
@@ -198,7 +198,12 @@ class CellEdgeVisualizer(StackVisualizer):
198
198
  def set_measurement_in_parent_le(self):
199
199
  # Set the edge size in the parent QLineEdit
200
200
 
201
- self.parent_le.setText(str(int(self.edge_slider.value())))
201
+ slider_val = self.edge_slider.value()
202
+ if isinstance(slider_val, tuple):
203
+ val = max(abs(slider_val[0]), abs(slider_val[1]))
204
+ self.parent_le.setText(str(int(val)))
205
+ else:
206
+ self.parent_le.setText(str(int(slider_val)))
202
207
  self.close()
203
208
 
204
209
  def set_measurement_in_parent_list(self):
{celldetective-1.5.0b13 → celldetective-1.5.0b14}/celldetective.egg-info/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: celldetective
3
- Version: 1.5.0b13
3
+ Version: 1.5.0b14
4
4
  Summary: description
5
5
  Home-page: http://github.com/remyeltorro/celldetective
6
6
  Author: Rémy Torro
celldetective-1.5.0b13/celldetective/_version.py DELETED
@@ -1 +0,0 @@
1
- __version__ = "1.5.0b13"