cellbrowser 1.2.7__tar.gz → 1.2.8__tar.gz

{cellbrowser-1.2.7/src/cbPyLib/cellbrowser.egg-info → cellbrowser-1.2.8}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: cellbrowser
-Version: 1.2.7
+Version: 1.2.8
 Summary: UCSC Cellbrowser, an interactive browser for single cell data. Includes converters and basic pipelines for text files, Seurat, Scanpy and Cellranger.
 Home-page: https://github.com/maximilianh/cellBrowser
 Author: Maximilian Haeussler

{cellbrowser-1.2.7 → cellbrowser-1.2.8}/src/cbPyLib/cellbrowser/_version.py

@@ -8,11 +8,11 @@ import json
 
 version_json = '''
 {
- "date": "2024-07-02T12:15:16-0700",
+ "date": "2024-07-09T12:41:36-0700",
  "dirty": false,
  "error": null,
- "full-revisionid": "bff421579e0abe0bc03a1f7fcc7d405155ca6d8f",
- "version": "v1.2.7"
+ "full-revisionid": "0775adae1db21db211175fe6099fd4217f7a21ac",
+ "version": "v1.2.8"
 }
 '''  # END VERSION_JSON
 

{cellbrowser-1.2.7 → cellbrowser-1.2.8}/src/cbPyLib/cellbrowser/cbWeb/js/cellBrowser.js

@@ -6270,6 +6270,7 @@ var cellbrowser = function() {
         let colLabelHeight = 50;
 
         // column label row must have a height to fit the text. Assume that text width is 14
+        // probably 14 is a bad idea and I should use document.getElementById('yourTextId').getComputedTextLength();
         let maxTextLen = 0;
         for (let i=0; i < genes.length; i++)
             maxTextLen = Math.max(genes[i].length, maxTextLen);
@@ -6290,7 +6291,7 @@ var cellbrowser = function() {
         let colorPal = makeColorPalette(cDefGradPalette, 20);
 
         plotDotRowLabels(htmls, rowLabelWidth, leftPad, colLabelHeight, rowHeight, rowLabels);
-        plotDotColumnLabels(htmls, leftPad+rowLabelWidth, topPad+colLabelHeight, colWidth, genes);
+        plotDotColumnLabels(htmls, leftPad+rowLabelWidth, topPad+colLabelHeight-10, colWidth, genes);
         plotDotCircles(htmls, dotData, leftPad+rowLabelWidth, topPad+colLabelHeight, colWidth, rowHeight, maxDotSize, colorPal);
         plotLegend(htmls, dotData, leftPad+rowLabelWidth+(colCount*colWidth)+cellCountColWidth, topPad+colLabelHeight, colorPal, legendWidth, legendHeight, maxDotSize)
 
@@ -6547,7 +6548,7 @@ var cellbrowser = function() {
         //});
         
         // use the current gene
-        let geneSym = getVar("gene");
+        let geneSym = getVar("gene", null);
         
         // if there is none, pick a reasonable default gene and meta var
         if (geneSym===null && db.conf.quickGenes)

{cellbrowser-1.2.7 → cellbrowser-1.2.8/src/cbPyLib/cellbrowser.egg-info}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: cellbrowser
-Version: 1.2.7
+Version: 1.2.8
 Summary: UCSC Cellbrowser, an interactive browser for single cell data. Includes converters and basic pipelines for text files, Seurat, Scanpy and Cellranger.
 Home-page: https://github.com/maximilianh/cellBrowser
 Author: Maximilian Haeussler