cdiscbuilder 1.1.8__tar.gz → 1.1.9__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (63) hide show
  1. {cdiscbuilder-1.1.8/src/cdiscbuilder.egg-info → cdiscbuilder-1.1.9}/PKG-INFO +1 -1
  2. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/pyproject.toml +1 -1
  3. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/adam/adam_derivation/derivations/sql_derivation.py +9 -1
  4. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9/src/cdiscbuilder.egg-info}/PKG-INFO +1 -1
  5. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/LICENSE +0 -0
  6. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/MANIFEST.in +0 -0
  7. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/README.md +0 -0
  8. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/setup.cfg +0 -0
  9. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/__init__.py +0 -0
  10. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/adam/__init__.py +0 -0
  11. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/adam/adam_derivation/__init__.py +0 -0
  12. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/adam/adam_derivation/derivations/__init__.py +0 -0
  13. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/adam/adam_derivation/derivations/base.py +0 -0
  14. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/adam/adam_derivation/derivations/function_derivation.py +0 -0
  15. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/adam/adam_derivation/engine.py +0 -0
  16. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/adam/adam_derivation/functions/__init__.py +0 -0
  17. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/adam/adam_derivation/functions/get_bmi.py +0 -0
  18. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/adam/adam_derivation/loaders/__init__.py +0 -0
  19. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/adam/adam_derivation/loaders/sdtm_loader.py +0 -0
  20. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/adam/adam_derivation/utils/__init__.py +0 -0
  21. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/adam/adam_derivation/utils/logger.py +0 -0
  22. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/adam/adam_spec/__init__.py +0 -0
  23. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/adam/adam_spec/adam_spec.py +0 -0
  24. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/adam/adam_spec/merge_yaml.py +0 -0
  25. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/adam/adam_spec/schema_validator.py +0 -0
  26. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/adam/adam_spec/tests/__init__.py +0 -0
  27. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/adam/adam_spec/tests/data/scenarios/organization/adsl_common.yaml +0 -0
  28. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/adam/adam_spec/tests/data/scenarios/project/adsl_project.yaml +0 -0
  29. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/adam/adam_spec/tests/data/scenarios/schema.yaml +0 -0
  30. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/adam/adam_spec/tests/data/scenarios/study1/adam_study1.yaml +0 -0
  31. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/adam/adam_spec/tests/data/scenarios/study1/adsl_study1.yaml +0 -0
  32. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/adam/adam_spec/tests/data/scenarios/study1/final_adsl_study1.yaml +0 -0
  33. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/adam/adam_spec/tests/data/scenarios/study2/adam_study2.yaml +0 -0
  34. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/adam/adam_spec/tests/data/scenarios/study2/adsl_study2.yaml +0 -0
  35. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/adam/adam_spec/tests/data/scenarios/study2/final_adsl_study2.yaml +0 -0
  36. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/adam/adam_spec/tests/test_adam_spec.py +0 -0
  37. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/adam/adam_spec/tests/test_merge_yaml.py +0 -0
  38. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/adam/adam_spec/tests/test_schema_validator.py +0 -0
  39. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/adam/adam_validation/__init__.py +0 -0
  40. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/adam/adam_validation/data_validator.py +0 -0
  41. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/adam/schema.yaml +0 -0
  42. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/cli.py +0 -0
  43. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/sdtm/__init__.py +0 -0
  44. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/sdtm/engine/__init__.py +0 -0
  45. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/sdtm/engine/classes/__init__.py +0 -0
  46. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/sdtm/engine/classes/finding.py +0 -0
  47. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/sdtm/engine/classes/general.py +0 -0
  48. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/sdtm/engine/config.py +0 -0
  49. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/sdtm/engine/functions.py +0 -0
  50. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/sdtm/engine/processor.py +0 -0
  51. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/sdtm/engine/validate.py +0 -0
  52. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/sdtm/loader/__init__.py +0 -0
  53. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/sdtm/loader/load.py +0 -0
  54. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/sdtm/loader/tests/__init__.py +0 -0
  55. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/sdtm/loader/tests/test_load.py +0 -0
  56. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/sdtm/odm_parser.py +0 -0
  57. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/sdtm/sdtm.py +0 -0
  58. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/tlf/__init__.py +0 -0
  59. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder.egg-info/SOURCES.txt +0 -0
  60. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder.egg-info/dependency_links.txt +0 -0
  61. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder.egg-info/entry_points.txt +0 -0
  62. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder.egg-info/requires.txt +0 -0
  63. {cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder.egg-info/top_level.txt +0 -0
{cdiscbuilder-1.1.8/src/cdiscbuilder.egg-info → cdiscbuilder-1.1.9}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: cdiscbuilder
3
- Version: 1.1.8
3
+ Version: 1.1.9
4
4
  Summary: A package to convert ODM XML to SDTM/ADaM Datasets
5
5
  Author-email: Ming-Chun Chen <hellomingchun@gmail.com>
6
6
  Requires-Python: >=3.8
{cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/pyproject.toml RENAMED
@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
4
4
 
5
5
  [project]
6
6
  name = "cdiscbuilder"
7
- version = "1.1.8"
7
+ version = "1.1.9"
8
8
  description = "A package to convert ODM XML to SDTM/ADaM Datasets"
9
9
  authors = [{name = "Ming-Chun Chen", email = "hellomingchun@gmail.com"}]
10
10
  dependencies = [
{cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/src/cdiscbuilder/adam/adam_derivation/derivations/sql_derivation.py RENAMED
@@ -63,7 +63,15 @@ class SQLDerivation(BaseDerivation):
63
63
  # We perform the cut logic by creating a temporary DataFrame with the series
64
64
  # and running the SQL generation logic on it.
65
65
  temp_col = "_val"
66
- temp_df = pl.DataFrame({temp_col: series})
66
+
67
+ # Cast to Float64 for numeric comparisons (handles string source data)
68
+ try:
69
+ numeric_series = series.cast(pl.Float64)
70
+ except Exception:
71
+ # If cast fails, try to keep as-is (maybe it's already numeric)
72
+ numeric_series = series
73
+
74
+ temp_df = pl.DataFrame({temp_col: numeric_series})
67
75
  source = temp_col
68
76
 
69
77
  # Build CASE expression (logic lifted from original _derive_cut)
{cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9/src/cdiscbuilder.egg-info}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: cdiscbuilder
3
- Version: 1.1.8
3
+ Version: 1.1.9
4
4
  Summary: A package to convert ODM XML to SDTM/ADaM Datasets
5
5
  Author-email: Ming-Chun Chen <hellomingchun@gmail.com>
6
6
  Requires-Python: >=3.8
{cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/LICENSE RENAMED
File without changes
{cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/MANIFEST.in RENAMED
File without changes
{cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/README.md RENAMED
File without changes
{cdiscbuilder-1.1.8 → cdiscbuilder-1.1.9}/setup.cfg RENAMED
File without changes