cdiscbuilder 1.1.7__tar.gz → 1.1.8__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (63) hide show
  1. {cdiscbuilder-1.1.7/src/cdiscbuilder.egg-info → cdiscbuilder-1.1.8}/PKG-INFO +1 -1
  2. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/pyproject.toml +1 -1
  3. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/adam/adam_derivation/derivations/sql_derivation.py +7 -0
  4. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8/src/cdiscbuilder.egg-info}/PKG-INFO +1 -1
  5. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/LICENSE +0 -0
  6. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/MANIFEST.in +0 -0
  7. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/README.md +0 -0
  8. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/setup.cfg +0 -0
  9. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/__init__.py +0 -0
  10. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/adam/__init__.py +0 -0
  11. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/adam/adam_derivation/__init__.py +0 -0
  12. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/adam/adam_derivation/derivations/__init__.py +0 -0
  13. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/adam/adam_derivation/derivations/base.py +0 -0
  14. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/adam/adam_derivation/derivations/function_derivation.py +0 -0
  15. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/adam/adam_derivation/engine.py +0 -0
  16. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/adam/adam_derivation/functions/__init__.py +0 -0
  17. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/adam/adam_derivation/functions/get_bmi.py +0 -0
  18. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/adam/adam_derivation/loaders/__init__.py +0 -0
  19. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/adam/adam_derivation/loaders/sdtm_loader.py +0 -0
  20. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/adam/adam_derivation/utils/__init__.py +0 -0
  21. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/adam/adam_derivation/utils/logger.py +0 -0
  22. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/adam/adam_spec/__init__.py +0 -0
  23. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/adam/adam_spec/adam_spec.py +0 -0
  24. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/adam/adam_spec/merge_yaml.py +0 -0
  25. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/adam/adam_spec/schema_validator.py +0 -0
  26. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/adam/adam_spec/tests/__init__.py +0 -0
  27. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/adam/adam_spec/tests/data/scenarios/organization/adsl_common.yaml +0 -0
  28. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/adam/adam_spec/tests/data/scenarios/project/adsl_project.yaml +0 -0
  29. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/adam/adam_spec/tests/data/scenarios/schema.yaml +0 -0
  30. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/adam/adam_spec/tests/data/scenarios/study1/adam_study1.yaml +0 -0
  31. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/adam/adam_spec/tests/data/scenarios/study1/adsl_study1.yaml +0 -0
  32. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/adam/adam_spec/tests/data/scenarios/study1/final_adsl_study1.yaml +0 -0
  33. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/adam/adam_spec/tests/data/scenarios/study2/adam_study2.yaml +0 -0
  34. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/adam/adam_spec/tests/data/scenarios/study2/adsl_study2.yaml +0 -0
  35. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/adam/adam_spec/tests/data/scenarios/study2/final_adsl_study2.yaml +0 -0
  36. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/adam/adam_spec/tests/test_adam_spec.py +0 -0
  37. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/adam/adam_spec/tests/test_merge_yaml.py +0 -0
  38. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/adam/adam_spec/tests/test_schema_validator.py +0 -0
  39. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/adam/adam_validation/__init__.py +0 -0
  40. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/adam/adam_validation/data_validator.py +0 -0
  41. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/adam/schema.yaml +0 -0
  42. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/cli.py +0 -0
  43. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/sdtm/__init__.py +0 -0
  44. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/sdtm/engine/__init__.py +0 -0
  45. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/sdtm/engine/classes/__init__.py +0 -0
  46. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/sdtm/engine/classes/finding.py +0 -0
  47. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/sdtm/engine/classes/general.py +0 -0
  48. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/sdtm/engine/config.py +0 -0
  49. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/sdtm/engine/functions.py +0 -0
  50. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/sdtm/engine/processor.py +0 -0
  51. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/sdtm/engine/validate.py +0 -0
  52. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/sdtm/loader/__init__.py +0 -0
  53. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/sdtm/loader/load.py +0 -0
  54. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/sdtm/loader/tests/__init__.py +0 -0
  55. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/sdtm/loader/tests/test_load.py +0 -0
  56. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/sdtm/odm_parser.py +0 -0
  57. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/sdtm/sdtm.py +0 -0
  58. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/tlf/__init__.py +0 -0
  59. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder.egg-info/SOURCES.txt +0 -0
  60. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder.egg-info/dependency_links.txt +0 -0
  61. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder.egg-info/entry_points.txt +0 -0
  62. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder.egg-info/requires.txt +0 -0
  63. {cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder.egg-info/top_level.txt +0 -0
{cdiscbuilder-1.1.7/src/cdiscbuilder.egg-info → cdiscbuilder-1.1.8}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: cdiscbuilder
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- Version: 1.1.7
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+ Version: 1.1.8
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  Summary: A package to convert ODM XML to SDTM/ADaM Datasets
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  Author-email: Ming-Chun Chen <hellomingchun@gmail.com>
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  Requires-Python: >=3.8
{cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/pyproject.toml RENAMED
@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
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  [project]
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  name = "cdiscbuilder"
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- version = "1.1.7"
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+ version = "1.1.8"
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  description = "A package to convert ODM XML to SDTM/ADaM Datasets"
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  authors = [{name = "Ming-Chun Chen", email = "hellomingchun@gmail.com"}]
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  dependencies = [
{cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/src/cdiscbuilder/adam/adam_derivation/derivations/sql_derivation.py RENAMED
@@ -429,6 +429,13 @@ class SQLDerivation(BaseDerivation):
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  # Calculate distance to target date
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  if target_col in subject_data.columns and date_col in subject_data.columns:
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  # Get target date (should be same for all rows of this subject)
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+ target_date = subject_data[target_col][0]
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+
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+ # Skip if target date is null
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+ if target_date is None:
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+ result_list.append(subject_data[source_col][0])
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+ continue
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+
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  # Calculate date differences and find closest
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  # Handle multiple formats: "YYYY-MM-DD HH:MM:SS", "YYYY-MM-DDTHH:MM:SS" (ISO), or "YYYY-MM-DD"
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  # We convert everything to Datetime for precision comparison (ms level)
{cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8/src/cdiscbuilder.egg-info}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: cdiscbuilder
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- Version: 1.1.7
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+ Version: 1.1.8
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  Summary: A package to convert ODM XML to SDTM/ADaM Datasets
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  Author-email: Ming-Chun Chen <hellomingchun@gmail.com>
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  Requires-Python: >=3.8
{cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/LICENSE RENAMED
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{cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/MANIFEST.in RENAMED
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{cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/README.md RENAMED
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{cdiscbuilder-1.1.7 → cdiscbuilder-1.1.8}/setup.cfg RENAMED
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