cap-anndata 0.2.0__tar.gz → 0.2.1__tar.gz
Sign up to get free protection for your applications and to get access to all the features.
- {cap_anndata-0.2.0 → cap_anndata-0.2.1}/PKG-INFO +3 -1
- {cap_anndata-0.2.0 → cap_anndata-0.2.1}/cap_anndata/backed_df.py +2 -2
- {cap_anndata-0.2.0 → cap_anndata-0.2.1}/cap_anndata.egg-info/PKG-INFO +3 -1
- {cap_anndata-0.2.0 → cap_anndata-0.2.1}/cap_anndata.egg-info/requires.txt +2 -0
- {cap_anndata-0.2.0 → cap_anndata-0.2.1}/setup.py +6 -2
- {cap_anndata-0.2.0 → cap_anndata-0.2.1}/LICENSE +0 -0
- {cap_anndata-0.2.0 → cap_anndata-0.2.1}/README.md +0 -0
- {cap_anndata-0.2.0 → cap_anndata-0.2.1}/cap_anndata/__init__.py +0 -0
- {cap_anndata-0.2.0 → cap_anndata-0.2.1}/cap_anndata/backed_uns.py +0 -0
- {cap_anndata-0.2.0 → cap_anndata-0.2.1}/cap_anndata/cap_anndata.py +0 -0
- {cap_anndata-0.2.0 → cap_anndata-0.2.1}/cap_anndata/reader.py +0 -0
- {cap_anndata-0.2.0 → cap_anndata-0.2.1}/cap_anndata.egg-info/SOURCES.txt +0 -0
- {cap_anndata-0.2.0 → cap_anndata-0.2.1}/cap_anndata.egg-info/dependency_links.txt +0 -0
- {cap_anndata-0.2.0 → cap_anndata-0.2.1}/cap_anndata.egg-info/top_level.txt +0 -0
- {cap_anndata-0.2.0 → cap_anndata-0.2.1}/setup.cfg +0 -0
- {cap_anndata-0.2.0 → cap_anndata-0.2.1}/test/test_backed_df.py +0 -0
- {cap_anndata-0.2.0 → cap_anndata-0.2.1}/test/test_backed_uns.py +0 -0
- {cap_anndata-0.2.0 → cap_anndata-0.2.1}/test/test_cap_anndata.py +0 -0
- {cap_anndata-0.2.0 → cap_anndata-0.2.1}/test/test_reader.py +0 -0
@@ -1,6 +1,6 @@
|
|
1
1
|
Metadata-Version: 2.1
|
2
2
|
Name: cap_anndata
|
3
|
-
Version: 0.2.
|
3
|
+
Version: 0.2.1
|
4
4
|
Summary: Partial read/write of AnnData (h5ad) files for low-memory operations with large datasets.
|
5
5
|
Home-page: https://github.com/cellannotation/cap-anndata
|
6
6
|
Author: R. Mukhin, A. Isaev
|
@@ -15,8 +15,10 @@ License-File: LICENSE
|
|
15
15
|
Requires-Dist: numpy>=1.26.3
|
16
16
|
Requires-Dist: pandas>=2.2.0
|
17
17
|
Requires-Dist: anndata>=0.10.5
|
18
|
+
Requires-Dist: h5py>=3.5.0
|
18
19
|
Provides-Extra: dev
|
19
20
|
Requires-Dist: pytest>=8.0.0; extra == "dev"
|
21
|
+
Requires-Dist: setuptools~=69.1.1; extra == "dev"
|
20
22
|
|
21
23
|
# CAP-AnnData: Enhanced Partial I/O for AnnData Files
|
22
24
|
|
@@ -1,6 +1,6 @@
|
|
1
1
|
import pandas as pd
|
2
2
|
import numpy as np
|
3
|
-
from typing import List, Any
|
3
|
+
from typing import List, Any, Union
|
4
4
|
import logging
|
5
5
|
|
6
6
|
from pandas._typing import Self
|
@@ -65,5 +65,5 @@ class CapAnnDataDF(pd.DataFrame):
|
|
65
65
|
column_order = np.append(self.column_order, new_columns)
|
66
66
|
return self.from_df(result, column_order=column_order)
|
67
67
|
|
68
|
-
def copy(self, deep: bool_t
|
68
|
+
def copy(self, deep: Union[bool_t, None] = True) -> Self:
|
69
69
|
return self.from_df(super().copy(deep=deep), column_order=self.column_order)
|
@@ -1,6 +1,6 @@
|
|
1
1
|
Metadata-Version: 2.1
|
2
2
|
Name: cap_anndata
|
3
|
-
Version: 0.2.
|
3
|
+
Version: 0.2.1
|
4
4
|
Summary: Partial read/write of AnnData (h5ad) files for low-memory operations with large datasets.
|
5
5
|
Home-page: https://github.com/cellannotation/cap-anndata
|
6
6
|
Author: R. Mukhin, A. Isaev
|
@@ -15,8 +15,10 @@ License-File: LICENSE
|
|
15
15
|
Requires-Dist: numpy>=1.26.3
|
16
16
|
Requires-Dist: pandas>=2.2.0
|
17
17
|
Requires-Dist: anndata>=0.10.5
|
18
|
+
Requires-Dist: h5py>=3.5.0
|
18
19
|
Provides-Extra: dev
|
19
20
|
Requires-Dist: pytest>=8.0.0; extra == "dev"
|
21
|
+
Requires-Dist: setuptools~=69.1.1; extra == "dev"
|
20
22
|
|
21
23
|
# CAP-AnnData: Enhanced Partial I/O for AnnData Files
|
22
24
|
|
@@ -2,7 +2,7 @@ from setuptools import setup, find_packages
|
|
2
2
|
|
3
3
|
setup(
|
4
4
|
name='cap_anndata',
|
5
|
-
version='0.2.
|
5
|
+
version='0.2.1',
|
6
6
|
author='R. Mukhin, A. Isaev',
|
7
7
|
author_email='roman@ebookapplications.com',
|
8
8
|
packages=find_packages(exclude=["test"]),
|
@@ -23,6 +23,10 @@ setup(
|
|
23
23
|
"numpy>=1.26.3",
|
24
24
|
"pandas>=2.2.0",
|
25
25
|
"anndata>=0.10.5",
|
26
|
+
"h5py>=3.5.0",
|
26
27
|
],
|
27
|
-
extras_require={"dev": [
|
28
|
+
extras_require={"dev": [
|
29
|
+
"pytest>=8.0.0",
|
30
|
+
"setuptools~=69.1.1"
|
31
|
+
]}
|
28
32
|
)
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|