caideface 0.1.3__tar.gz → 0.2.0__tar.gz

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Files changed (22) hide show
  1. {caideface-0.1.3/src/caideface.egg-info → caideface-0.2.0}/PKG-INFO +11 -5
  2. {caideface-0.1.3 → caideface-0.2.0}/README.md +8 -2
  3. {caideface-0.1.3 → caideface-0.2.0}/pyproject.toml +3 -3
  4. {caideface-0.1.3 → caideface-0.2.0}/src/caideface/__init__.py +1 -1
  5. {caideface-0.1.3 → caideface-0.2.0/src/caideface.egg-info}/PKG-INFO +11 -5
  6. {caideface-0.1.3 → caideface-0.2.0}/LICENSE.md +0 -0
  7. {caideface-0.1.3 → caideface-0.2.0}/setup.cfg +0 -0
  8. {caideface-0.1.3 → caideface-0.2.0}/src/caideface/cli.py +0 -0
  9. {caideface-0.1.3 → caideface-0.2.0}/src/caideface/data/mni_icbm152_t1_tal_nlin_sym_55_ext_brain_only.nii.gz +0 -0
  10. {caideface-0.1.3 → caideface-0.2.0}/src/caideface/data/t1_mask.nii.gz +0 -0
  11. {caideface-0.1.3 → caideface-0.2.0}/src/caideface/pipeline.py +0 -0
  12. {caideface-0.1.3 → caideface-0.2.0}/src/caideface/register.py +0 -0
  13. {caideface-0.1.3 → caideface-0.2.0}/src/caideface/reorient.py +0 -0
  14. {caideface-0.1.3 → caideface-0.2.0}/src/caideface/skull_strip.py +0 -0
  15. {caideface-0.1.3 → caideface-0.2.0}/src/caideface.egg-info/SOURCES.txt +0 -0
  16. {caideface-0.1.3 → caideface-0.2.0}/src/caideface.egg-info/dependency_links.txt +0 -0
  17. {caideface-0.1.3 → caideface-0.2.0}/src/caideface.egg-info/entry_points.txt +0 -0
  18. {caideface-0.1.3 → caideface-0.2.0}/src/caideface.egg-info/requires.txt +0 -0
  19. {caideface-0.1.3 → caideface-0.2.0}/src/caideface.egg-info/top_level.txt +0 -0
  20. {caideface-0.1.3 → caideface-0.2.0}/tests/test_register.py +0 -0
  21. {caideface-0.1.3 → caideface-0.2.0}/tests/test_reorient.py +0 -0
  22. {caideface-0.1.3 → caideface-0.2.0}/tests/test_skull_strip.py +0 -0
{caideface-0.1.3/src/caideface.egg-info → caideface-0.2.0}/PKG-INFO RENAMED
@@ -1,11 +1,11 @@
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  Metadata-Version: 2.4
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  Name: caideface
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- Version: 0.1.3
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+ Version: 0.2.0
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  Summary: MRI defacing pipeline with skull-stripping and affine registration from cai4cai
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  Author-email: Lorena Garcia-Foncillas <lorenagarfon00@gmail.com>
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  License-Expression: MIT
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- Project-URL: Homepage, https://github.com/LorenaGarcia-Foncillas/caideface
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- Project-URL: Repository, https://github.com/LorenaGarcia-Foncillas/caideface
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+ Project-URL: Homepage, https://github.com/cai4cai/defacing_pipeline
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+ Project-URL: Repository, https://github.com/cai4cai/defacing_pipeline
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  Keywords: MRI,defacing,anonymisation,skull-stripping,neuroimaging
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  Classifier: Development Status :: 3 - Alpha
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  Classifier: Intended Audience :: Science/Research
@@ -88,11 +88,17 @@ conda activate caideface
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  pip install caideface
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  ```
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+ Or install from GitHub:
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+
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+ ```bash
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+ pip install "caideface @ git+https://github.com/cai4cai/defacing_pipeline.git#subdirectory=caideface"
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+ ```
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+
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  Or install from source:
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  ```bash
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- git clone https://github.com/cai4cai/caideface.git
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- cd caideface
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+ git clone https://github.com/cai4cai/defacing_pipeline.git
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+ cd defacing_pipeline/caideface
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  pip install -e .
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  ```
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{caideface-0.1.3 → caideface-0.2.0}/README.md RENAMED
@@ -59,11 +59,17 @@ conda activate caideface
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  pip install caideface
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  ```
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+ Or install from GitHub:
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+
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+ ```bash
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+ pip install "caideface @ git+https://github.com/cai4cai/defacing_pipeline.git#subdirectory=caideface"
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+ ```
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+
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  Or install from source:
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  ```bash
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- git clone https://github.com/cai4cai/caideface.git
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- cd caideface
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+ git clone https://github.com/cai4cai/defacing_pipeline.git
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+ cd defacing_pipeline/caideface
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  pip install -e .
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  ```
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{caideface-0.1.3 → caideface-0.2.0}/pyproject.toml RENAMED
@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
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  [project]
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  name = "caideface"
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- version = "0.1.3"
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+ version = "0.2.0"
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  description = "MRI defacing pipeline with skull-stripping and affine registration from cai4cai"
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  readme = "README.md"
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  license = "MIT"
@@ -41,8 +41,8 @@ dev = [
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  caideface = "caideface.cli:main"
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  [project.urls]
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- Homepage = "https://github.com/LorenaGarcia-Foncillas/caideface"
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- Repository = "https://github.com/LorenaGarcia-Foncillas/caideface"
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+ Homepage = "https://github.com/cai4cai/defacing_pipeline"
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+ Repository = "https://github.com/cai4cai/defacing_pipeline"
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  [tool.setuptools.packages.find]
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  where = ["src"]
{caideface-0.1.3 → caideface-0.2.0}/src/caideface/__init__.py RENAMED
@@ -6,7 +6,7 @@ A three-step pipeline for anonymising head MRI scans:
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  3. Affine registration and defacing (BRAINSFit)
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  """
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- __version__ = "0.1.3"
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+ __version__ = "0.2.0"
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  from .pipeline import DefacePipeline
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  from .reorient import reorient_batch, reorient_single
{caideface-0.1.3 → caideface-0.2.0/src/caideface.egg-info}/PKG-INFO RENAMED
@@ -1,11 +1,11 @@
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  Metadata-Version: 2.4
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  Name: caideface
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- Version: 0.1.3
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+ Version: 0.2.0
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  Summary: MRI defacing pipeline with skull-stripping and affine registration from cai4cai
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  Author-email: Lorena Garcia-Foncillas <lorenagarfon00@gmail.com>
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  License-Expression: MIT
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- Project-URL: Homepage, https://github.com/LorenaGarcia-Foncillas/caideface
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- Project-URL: Repository, https://github.com/LorenaGarcia-Foncillas/caideface
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+ Project-URL: Homepage, https://github.com/cai4cai/defacing_pipeline
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+ Project-URL: Repository, https://github.com/cai4cai/defacing_pipeline
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  Keywords: MRI,defacing,anonymisation,skull-stripping,neuroimaging
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  Classifier: Development Status :: 3 - Alpha
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  Classifier: Intended Audience :: Science/Research
@@ -88,11 +88,17 @@ conda activate caideface
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  pip install caideface
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  ```
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+ Or install from GitHub:
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+
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+ ```bash
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+ pip install "caideface @ git+https://github.com/cai4cai/defacing_pipeline.git#subdirectory=caideface"
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+ ```
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+
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  Or install from source:
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  ```bash
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- git clone https://github.com/cai4cai/caideface.git
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- cd caideface
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+ git clone https://github.com/cai4cai/defacing_pipeline.git
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+ cd defacing_pipeline/caideface
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  pip install -e .
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  ```
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{caideface-0.1.3 → caideface-0.2.0}/LICENSE.md RENAMED
File without changes
{caideface-0.1.3 → caideface-0.2.0}/setup.cfg RENAMED
File without changes