bscampp 1.0.2b0__tar.gz → 1.0.3__tar.gz

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Files changed (35) hide show
  1. {bscampp-1.0.2b0 → bscampp-1.0.3}/CHANGELOG.md +3 -0
  2. {bscampp-1.0.2b0/bscampp.egg-info → bscampp-1.0.3}/PKG-INFO +1 -1
  3. {bscampp-1.0.2b0 → bscampp-1.0.3}/bscampp/__init__.py +1 -1
  4. {bscampp-1.0.2b0 → bscampp-1.0.3/bscampp.egg-info}/PKG-INFO +1 -1
  5. {bscampp-1.0.2b0 → bscampp-1.0.3}/LICENSE +0 -0
  6. {bscampp-1.0.2b0 → bscampp-1.0.3}/MANIFEST.in +0 -0
  7. {bscampp-1.0.2b0 → bscampp-1.0.3}/README.md +0 -0
  8. {bscampp-1.0.2b0 → bscampp-1.0.3}/bscampp/configs.py +0 -0
  9. {bscampp-1.0.2b0 → bscampp-1.0.3}/bscampp/default.config +0 -0
  10. {bscampp-1.0.2b0 → bscampp-1.0.3}/bscampp/functions.py +0 -0
  11. {bscampp-1.0.2b0 → bscampp-1.0.3}/bscampp/init_configs.py +0 -0
  12. {bscampp-1.0.2b0 → bscampp-1.0.3}/bscampp/jobs.py +0 -0
  13. {bscampp-1.0.2b0 → bscampp-1.0.3}/bscampp/pipeline.py +0 -0
  14. {bscampp-1.0.2b0 → bscampp-1.0.3}/bscampp/tools/epa-ng +0 -0
  15. {bscampp-1.0.2b0 → bscampp-1.0.3}/bscampp/tools/hamming_distance/CMakeLists.txt +0 -0
  16. {bscampp-1.0.2b0 → bscampp-1.0.3}/bscampp/tools/hamming_distance/fragment_hamming +0 -0
  17. {bscampp-1.0.2b0 → bscampp-1.0.3}/bscampp/tools/hamming_distance/hamming +0 -0
  18. {bscampp-1.0.2b0 → bscampp-1.0.3}/bscampp/tools/hamming_distance/homology +0 -0
  19. {bscampp-1.0.2b0 → bscampp-1.0.3}/bscampp/tools/hamming_distance/src/fragment_hamming.cpp +0 -0
  20. {bscampp-1.0.2b0 → bscampp-1.0.3}/bscampp/tools/hamming_distance/src/fragment_tree_hamming.cpp +0 -0
  21. {bscampp-1.0.2b0 → bscampp-1.0.3}/bscampp/tools/hamming_distance/src/fragment_tree_hamming_new.cpp +0 -0
  22. {bscampp-1.0.2b0 → bscampp-1.0.3}/bscampp/tools/hamming_distance/src/homology.cpp +0 -0
  23. {bscampp-1.0.2b0 → bscampp-1.0.3}/bscampp/tools/hamming_distance/src/new_hamming.cpp +0 -0
  24. {bscampp-1.0.2b0 → bscampp-1.0.3}/bscampp/tools/pplacer +0 -0
  25. {bscampp-1.0.2b0 → bscampp-1.0.3}/bscampp/utils.py +0 -0
  26. {bscampp-1.0.2b0 → bscampp-1.0.3}/bscampp.egg-info/SOURCES.txt +0 -0
  27. {bscampp-1.0.2b0 → bscampp-1.0.3}/bscampp.egg-info/dependency_links.txt +0 -0
  28. {bscampp-1.0.2b0 → bscampp-1.0.3}/bscampp.egg-info/entry_points.txt +0 -0
  29. {bscampp-1.0.2b0 → bscampp-1.0.3}/bscampp.egg-info/requires.txt +0 -0
  30. {bscampp-1.0.2b0 → bscampp-1.0.3}/bscampp.egg-info/top_level.txt +0 -0
  31. {bscampp-1.0.2b0 → bscampp-1.0.3}/pyproject.toml +0 -0
  32. {bscampp-1.0.2b0 → bscampp-1.0.3}/requirements.txt +0 -0
  33. {bscampp-1.0.2b0 → bscampp-1.0.3}/run_bscampp.py +0 -0
  34. {bscampp-1.0.2b0 → bscampp-1.0.3}/setup.cfg +0 -0
  35. {bscampp-1.0.2b0 → bscampp-1.0.3}/tests/test_dry_run.py +0 -0
{bscampp-1.0.2b0 → bscampp-1.0.3}/CHANGELOG.md RENAMED
@@ -1,3 +1,6 @@
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+ # BSCAMPP v1.0.3
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+ 1. Version bump to avoid the entire "pre-release" tag with beta versions.
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+
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  # BSCAMPP v1.0.2b
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  1. Removed redundant dependency in `bscampp/jobs.py`.
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  2. Added logging to each placement subtask with the base method.
{bscampp-1.0.2b0/bscampp.egg-info → bscampp-1.0.3}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.2
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  Name: bscampp
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- Version: 1.0.2b0
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+ Version: 1.0.3
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  Summary: BSCAMPP - A Scalable Phylogenetic Placement Tool
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  Author-email: Eleanor Wedell <ewedell2@illinois.edu>, Chengze Shen <chengze5@illinois.edu>
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  License: MIT License
{bscampp-1.0.2b0 → bscampp-1.0.3}/bscampp/__init__.py RENAMED
@@ -12,7 +12,7 @@ import logging, os
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  # not really needed for BSCAMPP but safe to update here
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  os.sys.setrecursionlimit(1000000)
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- __version__ = "1.0.2b"
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+ __version__ = "1.0.3"
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  _INSTALL_PATH = __path__[0]
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  # global variables to store all loggers
{bscampp-1.0.2b0 → bscampp-1.0.3/bscampp.egg-info}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.2
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  Name: bscampp
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- Version: 1.0.2b0
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+ Version: 1.0.3
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  Summary: BSCAMPP - A Scalable Phylogenetic Placement Tool
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  Author-email: Eleanor Wedell <ewedell2@illinois.edu>, Chengze Shen <chengze5@illinois.edu>
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  License: MIT License
{bscampp-1.0.2b0 → bscampp-1.0.3}/LICENSE RENAMED
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{bscampp-1.0.2b0 → bscampp-1.0.3}/MANIFEST.in RENAMED
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{bscampp-1.0.2b0 → bscampp-1.0.3}/README.md RENAMED
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{bscampp-1.0.2b0 → bscampp-1.0.3}/bscampp/configs.py RENAMED
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{bscampp-1.0.2b0 → bscampp-1.0.3}/bscampp/functions.py RENAMED
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{bscampp-1.0.2b0 → bscampp-1.0.3}/bscampp/jobs.py RENAMED
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{bscampp-1.0.2b0 → bscampp-1.0.3}/bscampp/pipeline.py RENAMED
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{bscampp-1.0.2b0 → bscampp-1.0.3}/bscampp/tools/epa-ng RENAMED
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{bscampp-1.0.2b0 → bscampp-1.0.3}/bscampp/tools/pplacer RENAMED
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{bscampp-1.0.2b0 → bscampp-1.0.3}/bscampp/utils.py RENAMED
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{bscampp-1.0.2b0 → bscampp-1.0.3}/pyproject.toml RENAMED
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{bscampp-1.0.2b0 → bscampp-1.0.3}/requirements.txt RENAMED
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{bscampp-1.0.2b0 → bscampp-1.0.3}/run_bscampp.py RENAMED
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{bscampp-1.0.2b0 → bscampp-1.0.3}/setup.cfg RENAMED
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{bscampp-1.0.2b0 → bscampp-1.0.3}/tests/test_dry_run.py RENAMED
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