brkraw 0.5.1__tar.gz → 0.5.2__tar.gz

{brkraw-0.5.1 → brkraw-0.5.2}/.github/workflows/publish.yml

@@ -12,15 +12,13 @@ on:
         description: "Tag to publish (optional, e.g. v1.2.3)"
         required: false
         type: string
-  release:
-    types: [published]
 
 permissions:
   contents: read
 
 jobs:
   build:
-    if: ${{ github.repository == 'BrkRaw/brkraw' && (github.event_name != 'release' || github.event.release.prerelease == false) }}
+    if: ${{ github.repository == 'BrkRaw/brkraw' }}
     runs-on: ubuntu-latest
     steps:
       - name: Resolve tag
@@ -41,12 +39,6 @@ jobs:
         run: |
           python -m pip install --upgrade pip
           python -m pip install build twine packaging
-      - name: Verify version matches tag
-        if: ${{ github.event_name == 'release' || (github.event_name == 'workflow_dispatch' && inputs.tag != '') }}
-        env:
-          TAG: ${{ steps.tag.outputs.value }}
-        run: |
-          python scripts/verify_release_version.py
       - name: Build dist
         run: python -m build
       - name: Check dist metadata
@@ -57,7 +49,7 @@ jobs:
           path: dist/
 
   publish:
-    if: ${{ github.repository == 'BrkRaw/brkraw' && (github.event_name != 'release' || github.event.release.prerelease == false) }}
+    if: ${{ github.repository == 'BrkRaw/brkraw' }}
     runs-on: ubuntu-latest
     needs: [build]
     permissions:
@@ -74,22 +66,13 @@ jobs:
       - name: Resolve publish target
         id: target
         run: |
-          if [ "${{ github.event_name }}" = "workflow_dispatch" ]; then
-            echo "target=${{ inputs.target }}" >> "$GITHUB_OUTPUT"
-          else
-            echo "target=pypi" >> "$GITHUB_OUTPUT"
-          fi
+          echo "target=${{ inputs.target }}" >> "$GITHUB_OUTPUT"
       - name: Publish to TestPyPI
         if: ${{ steps.target.outputs.target == 'testpypi' }}
         uses: pypa/gh-action-pypi-publish@release/v1
         with:
           packages-dir: dist/
           repository-url: https://test.pypi.org/legacy/
-      - name: Upload artifacts to GitHub Release
-        if: ${{ github.event_name == 'release' }}
-        env:
-          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-        run: gh release upload ${{ github.ref_name }} dist/* --clobber
       - name: Publish to PyPI
         if: ${{ steps.target.outputs.target == 'pypi' }}
         uses: pypa/gh-action-pypi-publish@release/v1

brkraw-0.5.2/CITATION.cff

@@ -0,0 +1,37 @@
+cff-version: 1.2.0
+message: "If you use this software, please cite it as below."
+title: "BrkRaw: A modular toolkit for Bruker MRI raw-data handling"
+type: software
+
+authors:
+  - family-names: Lee
+    given-names: Sung-Ho
+    orcid: "https://orcid.org/0000-0001-5292-0747"
+    affiliation: "Center for Animal MRI (CAMRI), University of North Carolina at Chapel Hill, Chapel Hill, NC, United States; Biomedical Research Imaging Center (BRIC), University of North Carolina at Chapel Hill, Chapel Hill, NC, United States; Department of Neurology, UNC School of Medicine, Chapel Hill, NC, United States"
+  - family-names: Devenyi
+    given-names: Gabriel A.
+    orcid: "https://orcid.org/0000-0002-7766-1187"
+    affiliation: "Cerebral Imaging Centre, Douglas Mental Health University Institute, Montreal, QC, Canada; Department of Psychiatry, McGill University, Montreal, QC, Canada"
+  - family-names: Ban
+    given-names: Woomi
+    orcid: "https://orcid.org/0000-0003-2003-717X"
+    affiliation: "Center for Animal MRI (CAMRI), University of North Carolina at Chapel Hill, Chapel Hill, NC, United States; Biomedical Research Imaging Center (BRIC), University of North Carolina at Chapel Hill, Chapel Hill, NC, United States; Department of Neurology, UNC School of Medicine, Chapel Hill, NC, United States"
+  - family-names: Shih
+    given-names: Yen-Yu Ian
+    orcid: "https://orcid.org/0000-0001-6529-911X"
+    affiliation: "Center for Animal MRI (CAMRI), University of North Carolina at Chapel Hill, Chapel Hill, NC, United States; Biomedical Research Imaging Center (BRIC), University of North Carolina at Chapel Hill, Chapel Hill, NC, United States; Department of Neurology, UNC School of Medicine, Chapel Hill, NC, United States"
+
+doi: "10.5281/zenodo.3818614"
+repository-code: "https://github.com/BrkRaw/brkraw"
+url: "https://brkraw.github.io"
+
+license: "GPL-3.0-only"
+
+keywords:
+  - Bruker
+  - MRI
+  - preclinical MRI
+  - BIDS
+  - neuroimaging
+
+version: "0.5.2"

{brkraw-0.5.1 → brkraw-0.5.2}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: brkraw
-Version: 0.5.1
+Version: 0.5.2
 Summary: Toolkit for loading Bruker Paravision datasets, mapping metadata, and exporting NIfTI
 Project-URL: Homepage, https://brkraw.github.io
 Maintainer-email: SungHo Lee <shlee@unc.edu>
@@ -48,7 +48,7 @@ Description-Content-Type: text/markdown
 
 A modular toolkit for Bruker MRI raw-data handling.
 
-BrkRaw (v0.5.1) converts raw data into standardized, neuroimaging-ready
+BrkRaw (v0.5.2) converts raw data into standardized, neuroimaging-ready
 datasets, with extensible rules/specs and plugin hooks.
 
 - Documentation: [brkraw.github.io](https://brkraw.github.io/)

{brkraw-0.5.1 → brkraw-0.5.2}/README.md

@@ -10,7 +10,7 @@
 
 A modular toolkit for Bruker MRI raw-data handling.
 
-BrkRaw (v0.5.1) converts raw data into standardized, neuroimaging-ready
+BrkRaw (v0.5.2) converts raw data into standardized, neuroimaging-ready
 datasets, with extensible rules/specs and plugin hooks.
 
 - Documentation: [brkraw.github.io](https://brkraw.github.io/)

brkraw-0.5.2/RELEASE_NOTES.md

@@ -0,0 +1,8 @@
+# Release v0.5.2
+
+Date: 2026-01-19
+Changes since 0.5.1
+
+- chore: prepare release v0.5.2 (b899a8d)
+- Adjust CITATION formatting for Zenodo (fc19cc0)
+- remove auto publish (ff4e123)

{brkraw-0.5.1 → brkraw-0.5.2}/brkraw/__init__.py

@@ -1,6 +1,6 @@
 from __future__ import annotations
 
-__version__ = '0.5.1'
+__version__ = '0.5.2'
 from .apps.loader import BrukerLoader
 
 

{brkraw-0.5.1 → brkraw-0.5.2}/scripts/release_prep.py

@@ -51,7 +51,6 @@ def update_readme_version(version):
 
 
 def update_citation(version: str) -> None:
-    today = dt.date.today().isoformat()
     text = CITATION_PATH.read_text(encoding="utf-8")
 
     text, count_v = re.subn(
@@ -63,16 +62,6 @@ def update_citation(version: str) -> None:
     if count_v != 1:
         raise RuntimeError("Failed to update version in CITATION.cff")
 
-    # update date-released
-    text, count_d = re.subn(
-        r"(?m)^date-released:\s*\"?\d{4}-\d{2}-\d{2}\"?$",
-        f'date-released: "{today}"',
-        text,
-        count=1,
-    )
-    if count_d != 1:
-        raise RuntimeError("Failed to update date-released in CITATION.cff")
-
     CITATION_PATH.write_text(text, encoding="utf-8")
 
 

brkraw-0.5.1/CITATION.cff

@@ -1,49 +0,0 @@
-cff-version: 1.2.0
-message: "If you use this software, please cite it as below."
-title: "BrkRaw: A modular toolkit for Bruker MRI raw-data handling"
-type: software
-
-authors:
-  - family-names: Lee
-    given-names: Sung-Ho
-    orcid: "https://orcid.org/0000-0001-5292-0747"
-    affiliation:
-      - "Center for Animal MRI (CAMRI), University of North Carolina at Chapel Hill, Chapel Hill, NC, United States"
-      - "Biomedical Research Imaging Center (BRIC), University of North Carolina at Chapel Hill, Chapel Hill, NC, United States"
-      - "Department of Neurology, UNC School of Medicine, Chapel Hill, NC, United States"
-  - family-names: Devenyi
-    given-names: Gabriel A.
-    orcid: "https://orcid.org/0000-0002-7766-1187"
-    affiliation:
-      - "Cerebral Imaging Centre, Douglas Mental Health University Institute, Montreal, QC, Canada"
-      - "Department of Psychiatry, McGill University, Montreal, QC, Canada"
-  - family-names: Ban
-    given-names: Woomi
-    orcid: "https://orcid.org/0000-0003-2003-717X"
-    affiliation:
-      - "Center for Animal MRI (CAMRI), University of North Carolina at Chapel Hill, Chapel Hill, NC, United States"
-      - "Biomedical Research Imaging Center (BRIC), University of North Carolina at Chapel Hill, Chapel Hill, NC, United States"
-      - "Department of Neurology, UNC School of Medicine, Chapel Hill, NC, United States"
-  - family-names: Shih
-    given-names: Yen-Yu Ian
-    orcid: "https://orcid.org/0000-0001-6529-911X"
-    affiliation:
-      - "Center for Animal MRI (CAMRI), University of North Carolina at Chapel Hill, Chapel Hill, NC, United States"
-      - "Biomedical Research Imaging Center (BRIC), University of North Carolina at Chapel Hill, Chapel Hill, NC, United States"
-      - "Department of Neurology, UNC School of Medicine, Chapel Hill, NC, United States"
-
-doi: "10.5281/zenodo.3818614"
-repository-code: "https://github.com/BrkRaw/brkraw"
-url: "https://brkraw.github.io"
-
-license: "GPL-3.0-only"
-
-keywords:
-  - Bruker
-  - MRI
-  - preclinical MRI
-  - BIDS
-  - neuroimaging
-
-version: "0.5.1"
-date-released: "2026-01-19"

brkraw-0.5.1/RELEASE_NOTES.md

@@ -1,13 +0,0 @@
-# Release v0.5.1
-
-Date: 2026-01-19
-Changes since 0.5.0
-
-- chore: prepare release v0.5.1 (5902a9d)
-- Handle quoted CITATION fields in release prep (bc0bbc8)
-- docs: update contributors (78d6da5)
-- Use gh pr view for release PR lookup (af9fdf1)
-- Make release PR creation compatible with gh (4a939a0)
-- Fix release PR lookup (17cf410)
-- Preserve study fields in override layout (edc67ba)
-- Fix publish version check script (719ae4c)