brainrender 2.2.2__tar.gz → 2.2.3__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {brainrender-2.2.2 → brainrender-2.2.3}/.github/workflows/test_and_deploy.yml +3 -3
- {brainrender-2.2.2 → brainrender-2.2.3}/PKG-INFO +3 -3
- {brainrender-2.2.2 → brainrender-2.2.3}/brainrender/render.py +18 -21
- {brainrender-2.2.2 → brainrender-2.2.3}/brainrender.egg-info/PKG-INFO +3 -3
- brainrender-2.2.3/brainrender.egg-info/scm_version.json +8 -0
- {brainrender-2.2.2 → brainrender-2.2.3}/pyproject.toml +3 -3
- brainrender-2.2.2/brainrender.egg-info/scm_version.json +0 -8
- {brainrender-2.2.2 → brainrender-2.2.3}/.gitignore +0 -0
- {brainrender-2.2.2 → brainrender-2.2.3}/CITATION.cff +0 -0
- {brainrender-2.2.2 → brainrender-2.2.3}/LICENSE +0 -0
- {brainrender-2.2.2 → brainrender-2.2.3}/MANIFEST.in +0 -0
- {brainrender-2.2.2 → brainrender-2.2.3}/README.md +0 -0
- {brainrender-2.2.2 → brainrender-2.2.3}/brainrender/__init__.py +0 -0
- {brainrender-2.2.2 → brainrender-2.2.3}/brainrender/_colors.py +0 -0
- {brainrender-2.2.2 → brainrender-2.2.3}/brainrender/_io.py +0 -0
- {brainrender-2.2.2 → brainrender-2.2.3}/brainrender/_jupyter.py +0 -0
- {brainrender-2.2.2 → brainrender-2.2.3}/brainrender/_utils.py +0 -0
- {brainrender-2.2.2 → brainrender-2.2.3}/brainrender/_video.py +0 -0
- {brainrender-2.2.2 → brainrender-2.2.3}/brainrender/actor.py +0 -0
- {brainrender-2.2.2 → brainrender-2.2.3}/brainrender/actors/__init__.py +0 -0
- {brainrender-2.2.2 → brainrender-2.2.3}/brainrender/actors/cylinder.py +0 -0
- {brainrender-2.2.2 → brainrender-2.2.3}/brainrender/actors/line.py +0 -0
- {brainrender-2.2.2 → brainrender-2.2.3}/brainrender/actors/neurons.py +0 -0
- {brainrender-2.2.2 → brainrender-2.2.3}/brainrender/actors/points.py +0 -0
- {brainrender-2.2.2 → brainrender-2.2.3}/brainrender/actors/ruler.py +0 -0
- {brainrender-2.2.2 → brainrender-2.2.3}/brainrender/actors/streamlines.py +0 -0
- {brainrender-2.2.2 → brainrender-2.2.3}/brainrender/actors/volume.py +0 -0
- {brainrender-2.2.2 → brainrender-2.2.3}/brainrender/atlas.py +0 -0
- {brainrender-2.2.2 → brainrender-2.2.3}/brainrender/atlas_specific/__init__.py +0 -0
- {brainrender-2.2.2 → brainrender-2.2.3}/brainrender/atlas_specific/allen_brain_atlas/gene_expression/__init__.py +0 -0
- {brainrender-2.2.2 → brainrender-2.2.3}/brainrender/atlas_specific/allen_brain_atlas/gene_expression/api.py +0 -0
- {brainrender-2.2.2 → brainrender-2.2.3}/brainrender/atlas_specific/allen_brain_atlas/gene_expression/ge_utils.py +0 -0
- {brainrender-2.2.2 → brainrender-2.2.3}/brainrender/atlas_specific/allen_brain_atlas/streamlines.py +0 -0
- {brainrender-2.2.2 → brainrender-2.2.3}/brainrender/camera.py +0 -0
- {brainrender-2.2.2 → brainrender-2.2.3}/brainrender/cameras.py +0 -0
- {brainrender-2.2.2 → brainrender-2.2.3}/brainrender/scene.py +0 -0
- {brainrender-2.2.2 → brainrender-2.2.3}/brainrender/settings.py +0 -0
- {brainrender-2.2.2 → brainrender-2.2.3}/brainrender/video.py +0 -0
- {brainrender-2.2.2 → brainrender-2.2.3}/brainrender.egg-info/SOURCES.txt +0 -0
- {brainrender-2.2.2 → brainrender-2.2.3}/brainrender.egg-info/dependency_links.txt +0 -0
- {brainrender-2.2.2 → brainrender-2.2.3}/brainrender.egg-info/requires.txt +0 -0
- {brainrender-2.2.2 → brainrender-2.2.3}/brainrender.egg-info/scm_file_list.json +0 -0
- {brainrender-2.2.2 → brainrender-2.2.3}/brainrender.egg-info/top_level.txt +0 -0
- {brainrender-2.2.2 → brainrender-2.2.3}/setup.cfg +0 -0
|
@@ -39,12 +39,12 @@ jobs:
|
|
|
39
39
|
matrix:
|
|
40
40
|
# Run all supported Python versions on linux
|
|
41
41
|
os: [ubuntu-latest]
|
|
42
|
-
python-version: ["3.
|
|
42
|
+
python-version: ["3.12", "3.13", "3.14"]
|
|
43
43
|
include:
|
|
44
44
|
- os: macos-latest
|
|
45
|
-
python-version: "3.
|
|
45
|
+
python-version: "3.14"
|
|
46
46
|
- os: windows-latest
|
|
47
|
-
python-version: "3.
|
|
47
|
+
python-version: "3.14"
|
|
48
48
|
|
|
49
49
|
steps:
|
|
50
50
|
- name: Cache brainglobe directory
|
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
Metadata-Version: 2.4
|
|
2
2
|
Name: brainrender
|
|
3
|
-
Version: 2.2.
|
|
3
|
+
Version: 2.2.3
|
|
4
4
|
Summary: Visualisation and exploration of brain atlases and other anatomical data
|
|
5
5
|
Author-email: "Federico Claudi, Adam Tyson, Luigi Petrucco" <hello@brainglobe.info>
|
|
6
6
|
License: BSD-3-Clause
|
|
@@ -12,14 +12,14 @@ Project-URL: User Support, https://forum.image.sc/tag/brainglobe
|
|
|
12
12
|
Classifier: Development Status :: 3 - Alpha
|
|
13
13
|
Classifier: Programming Language :: Python
|
|
14
14
|
Classifier: Programming Language :: Python :: 3
|
|
15
|
-
Classifier: Programming Language :: Python :: 3.11
|
|
16
15
|
Classifier: Programming Language :: Python :: 3.12
|
|
17
16
|
Classifier: Programming Language :: Python :: 3.13
|
|
17
|
+
Classifier: Programming Language :: Python :: 3.14
|
|
18
18
|
Classifier: Operating System :: OS Independent
|
|
19
19
|
Classifier: License :: OSI Approved :: BSD License
|
|
20
20
|
Classifier: Intended Audience :: Developers
|
|
21
21
|
Classifier: Intended Audience :: Science/Research
|
|
22
|
-
Requires-Python: >=3.
|
|
22
|
+
Requires-Python: >=3.12
|
|
23
23
|
Description-Content-Type: text/markdown
|
|
24
24
|
License-File: LICENSE
|
|
25
25
|
Requires-Dist: brainglobe-atlasapi>=2.0.1
|
|
@@ -2,6 +2,7 @@
|
|
|
2
2
|
|
|
3
3
|
from __future__ import annotations
|
|
4
4
|
|
|
5
|
+
import weakref
|
|
5
6
|
from datetime import datetime
|
|
6
7
|
from pathlib import Path
|
|
7
8
|
from typing import TYPE_CHECKING, Any
|
|
@@ -52,7 +53,8 @@ class Render:
|
|
|
52
53
|
self._get_plotter()
|
|
53
54
|
else:
|
|
54
55
|
self.plotter = plotter
|
|
55
|
-
|
|
56
|
+
|
|
57
|
+
self._bind_screenshot_key()
|
|
56
58
|
|
|
57
59
|
def _get_plotter(self) -> None:
|
|
58
60
|
"""
|
|
@@ -67,7 +69,21 @@ class Render:
|
|
|
67
69
|
size="full" if settings.WHOLE_SCREEN else (1600, 1200),
|
|
68
70
|
)
|
|
69
71
|
|
|
70
|
-
|
|
72
|
+
def _bind_screenshot_key(self) -> None:
|
|
73
|
+
"""
|
|
74
|
+
Save a screenshot when ``s`` is pressed in the render window.
|
|
75
|
+
"""
|
|
76
|
+
# Weak reference: holding self here makes Scene <-> plotter a
|
|
77
|
+
# reference cycle, so a dropped Scene is only closed by the cyclic
|
|
78
|
+
# garbage collector, on whichever thread happens to run it.
|
|
79
|
+
scene_ref = weakref.ref(self)
|
|
80
|
+
|
|
81
|
+
def on_keypress(event) -> None:
|
|
82
|
+
scene = scene_ref()
|
|
83
|
+
if scene is not None and event.keypress == "s":
|
|
84
|
+
scene.screenshot()
|
|
85
|
+
|
|
86
|
+
self.plotter.add_callback("KeyPress", on_keypress)
|
|
71
87
|
|
|
72
88
|
def _make_axes(self) -> dict:
|
|
73
89
|
"""
|
|
@@ -419,22 +435,3 @@ class Render:
|
|
|
419
435
|
logger.debug(f"Saving scene at {savepath}")
|
|
420
436
|
self.plotter.screenshot(filename=savepath, scale=scale)
|
|
421
437
|
return savepath
|
|
422
|
-
|
|
423
|
-
def keypress(self, key: str) -> None: # pragma: no cover
|
|
424
|
-
"""
|
|
425
|
-
Handle key presses during interactive rendering.
|
|
426
|
-
|
|
427
|
-
- ``s``: take a screenshot
|
|
428
|
-
- ``q`` / ``Esc``: close the window
|
|
429
|
-
- ``c``: print current camera parameters
|
|
430
|
-
|
|
431
|
-
Parameters
|
|
432
|
-
----------
|
|
433
|
-
key
|
|
434
|
-
Key identifier string from vedo.
|
|
435
|
-
"""
|
|
436
|
-
if key == "s":
|
|
437
|
-
self.screenshot()
|
|
438
|
-
|
|
439
|
-
elif key in ("q", "Esc"):
|
|
440
|
-
self.close()
|
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
Metadata-Version: 2.4
|
|
2
2
|
Name: brainrender
|
|
3
|
-
Version: 2.2.
|
|
3
|
+
Version: 2.2.3
|
|
4
4
|
Summary: Visualisation and exploration of brain atlases and other anatomical data
|
|
5
5
|
Author-email: "Federico Claudi, Adam Tyson, Luigi Petrucco" <hello@brainglobe.info>
|
|
6
6
|
License: BSD-3-Clause
|
|
@@ -12,14 +12,14 @@ Project-URL: User Support, https://forum.image.sc/tag/brainglobe
|
|
|
12
12
|
Classifier: Development Status :: 3 - Alpha
|
|
13
13
|
Classifier: Programming Language :: Python
|
|
14
14
|
Classifier: Programming Language :: Python :: 3
|
|
15
|
-
Classifier: Programming Language :: Python :: 3.11
|
|
16
15
|
Classifier: Programming Language :: Python :: 3.12
|
|
17
16
|
Classifier: Programming Language :: Python :: 3.13
|
|
17
|
+
Classifier: Programming Language :: Python :: 3.14
|
|
18
18
|
Classifier: Operating System :: OS Independent
|
|
19
19
|
Classifier: License :: OSI Approved :: BSD License
|
|
20
20
|
Classifier: Intended Audience :: Developers
|
|
21
21
|
Classifier: Intended Audience :: Science/Research
|
|
22
|
-
Requires-Python: >=3.
|
|
22
|
+
Requires-Python: >=3.12
|
|
23
23
|
Description-Content-Type: text/markdown
|
|
24
24
|
License-File: LICENSE
|
|
25
25
|
Requires-Dist: brainglobe-atlasapi>=2.0.1
|
|
@@ -5,7 +5,7 @@ authors = [
|
|
|
5
5
|
]
|
|
6
6
|
description = "Visualisation and exploration of brain atlases and other anatomical data"
|
|
7
7
|
readme = "README.md"
|
|
8
|
-
requires-python = ">=3.
|
|
8
|
+
requires-python = ">=3.12"
|
|
9
9
|
dynamic = ["version"]
|
|
10
10
|
|
|
11
11
|
dependencies = [
|
|
@@ -36,9 +36,9 @@ classifiers = [
|
|
|
36
36
|
"Development Status :: 3 - Alpha",
|
|
37
37
|
"Programming Language :: Python",
|
|
38
38
|
"Programming Language :: Python :: 3",
|
|
39
|
-
"Programming Language :: Python :: 3.11",
|
|
40
39
|
"Programming Language :: Python :: 3.12",
|
|
41
40
|
"Programming Language :: Python :: 3.13",
|
|
41
|
+
"Programming Language :: Python :: 3.14",
|
|
42
42
|
"Operating System :: OS Independent",
|
|
43
43
|
"License :: OSI Approved :: BSD License",
|
|
44
44
|
"Intended Audience :: Developers",
|
|
@@ -84,7 +84,7 @@ markers = [
|
|
|
84
84
|
]
|
|
85
85
|
|
|
86
86
|
[tool.black]
|
|
87
|
-
target-version = ['
|
|
87
|
+
target-version = ['py312', 'py313', 'py314']
|
|
88
88
|
skip-string-normalization = false
|
|
89
89
|
line-length = 79
|
|
90
90
|
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
{brainrender-2.2.2 → brainrender-2.2.3}/brainrender/atlas_specific/allen_brain_atlas/streamlines.py
RENAMED
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|