brainrender 2.1.19__tar.gz → 2.1.20__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (41) hide show
  1. {brainrender-2.1.19 → brainrender-2.1.20}/PKG-INFO +3 -3
  2. {brainrender-2.1.19 → brainrender-2.1.20}/brainrender/_jupyter.py +8 -4
  3. {brainrender-2.1.19 → brainrender-2.1.20}/brainrender.egg-info/PKG-INFO +3 -3
  4. {brainrender-2.1.19 → brainrender-2.1.20}/brainrender.egg-info/requires.txt +2 -2
  5. {brainrender-2.1.19 → brainrender-2.1.20}/pyproject.toml +2 -2
  6. {brainrender-2.1.19 → brainrender-2.1.20}/.github/workflows/test_and_deploy.yml +0 -0
  7. {brainrender-2.1.19 → brainrender-2.1.20}/.gitignore +0 -0
  8. {brainrender-2.1.19 → brainrender-2.1.20}/CITATION.cff +0 -0
  9. {brainrender-2.1.19 → brainrender-2.1.20}/LICENSE +0 -0
  10. {brainrender-2.1.19 → brainrender-2.1.20}/MANIFEST.in +0 -0
  11. {brainrender-2.1.19 → brainrender-2.1.20}/README.md +0 -0
  12. {brainrender-2.1.19 → brainrender-2.1.20}/brainrender/__init__.py +0 -0
  13. {brainrender-2.1.19 → brainrender-2.1.20}/brainrender/_colors.py +0 -0
  14. {brainrender-2.1.19 → brainrender-2.1.20}/brainrender/_io.py +0 -0
  15. {brainrender-2.1.19 → brainrender-2.1.20}/brainrender/_utils.py +0 -0
  16. {brainrender-2.1.19 → brainrender-2.1.20}/brainrender/_video.py +0 -0
  17. {brainrender-2.1.19 → brainrender-2.1.20}/brainrender/actor.py +0 -0
  18. {brainrender-2.1.19 → brainrender-2.1.20}/brainrender/actors/__init__.py +0 -0
  19. {brainrender-2.1.19 → brainrender-2.1.20}/brainrender/actors/cylinder.py +0 -0
  20. {brainrender-2.1.19 → brainrender-2.1.20}/brainrender/actors/line.py +0 -0
  21. {brainrender-2.1.19 → brainrender-2.1.20}/brainrender/actors/neurons.py +0 -0
  22. {brainrender-2.1.19 → brainrender-2.1.20}/brainrender/actors/points.py +0 -0
  23. {brainrender-2.1.19 → brainrender-2.1.20}/brainrender/actors/ruler.py +0 -0
  24. {brainrender-2.1.19 → brainrender-2.1.20}/brainrender/actors/streamlines.py +0 -0
  25. {brainrender-2.1.19 → brainrender-2.1.20}/brainrender/actors/volume.py +0 -0
  26. {brainrender-2.1.19 → brainrender-2.1.20}/brainrender/atlas.py +0 -0
  27. {brainrender-2.1.19 → brainrender-2.1.20}/brainrender/atlas_specific/__init__.py +0 -0
  28. {brainrender-2.1.19 → brainrender-2.1.20}/brainrender/atlas_specific/allen_brain_atlas/gene_expression/__init__.py +0 -0
  29. {brainrender-2.1.19 → brainrender-2.1.20}/brainrender/atlas_specific/allen_brain_atlas/gene_expression/api.py +0 -0
  30. {brainrender-2.1.19 → brainrender-2.1.20}/brainrender/atlas_specific/allen_brain_atlas/gene_expression/ge_utils.py +0 -0
  31. {brainrender-2.1.19 → brainrender-2.1.20}/brainrender/atlas_specific/allen_brain_atlas/streamlines.py +0 -0
  32. {brainrender-2.1.19 → brainrender-2.1.20}/brainrender/camera.py +0 -0
  33. {brainrender-2.1.19 → brainrender-2.1.20}/brainrender/cameras.py +0 -0
  34. {brainrender-2.1.19 → brainrender-2.1.20}/brainrender/render.py +0 -0
  35. {brainrender-2.1.19 → brainrender-2.1.20}/brainrender/scene.py +0 -0
  36. {brainrender-2.1.19 → brainrender-2.1.20}/brainrender/settings.py +0 -0
  37. {brainrender-2.1.19 → brainrender-2.1.20}/brainrender/video.py +0 -0
  38. {brainrender-2.1.19 → brainrender-2.1.20}/brainrender.egg-info/SOURCES.txt +0 -0
  39. {brainrender-2.1.19 → brainrender-2.1.20}/brainrender.egg-info/dependency_links.txt +0 -0
  40. {brainrender-2.1.19 → brainrender-2.1.20}/brainrender.egg-info/top_level.txt +0 -0
  41. {brainrender-2.1.19 → brainrender-2.1.20}/setup.cfg +0 -0
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: brainrender
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- Version: 2.1.19
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+ Version: 2.1.20
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  Summary: Visualisation and exploration of brain atlases and other anatomical data
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  Author-email: "Federico Claudi, Adam Tyson, Luigi Petrucco" <hello@brainglobe.info>
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  License: BSD-3-Clause
@@ -25,10 +25,10 @@ License-File: LICENSE
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  Requires-Dist: brainglobe-atlasapi>=2.0.1
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  Requires-Dist: brainglobe-space>=1.0.0
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  Requires-Dist: brainglobe-utils>=0.5.0
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- Requires-Dist: h5py<3.16.0
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+ Requires-Dist: h5py
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  Requires-Dist: k3d
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  Requires-Dist: loguru
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- Requires-Dist: morphapi>=0.2.1
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+ Requires-Dist: morphapi>=0.3.3
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  Requires-Dist: msgpack
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  Requires-Dist: myterial
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  Requires-Dist: numpy
@@ -43,9 +43,13 @@ class not_on_jupyter: # pragma: no cover
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  return self.func(obj, *args, **kwargs)
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  else:
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  print(
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- f"[{orange_dark}]Cannot run function [bold {salmon}]{self.func.__name__}[/ bold {salmon}] in a jupyter notebook",
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- f"[{orange_dark}]Try setting the correct backend before creating your scene:\n",
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- Syntax("from vedo import embedWindow", lexer="python"),
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- Syntax("embedWindow(None)", lexer="python"),
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+ f"[{orange_dark}]Cannot run function [bold {salmon}]{self.func.__name__}[/bold {salmon}] in a jupyter notebook.",
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+ f"[{orange_dark}]To use brainrender in a Jupyter notebook, set the vedo backend to 'k3d' before creating your scene:\n",
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+ Syntax("import vedo", lexer="python"),
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+ Syntax(
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+ "vedo.settings.default_backend = 'k3d'", lexer="python"
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+ ),
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+ f"\n[{orange_dark}]Note: some features are not available in the k3d backend.",
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+ f"[{orange_dark}]To use all features, run brainrender in a standard Python script or interactive terminal instead.",
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  )
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  return None
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: brainrender
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- Version: 2.1.19
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+ Version: 2.1.20
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  Summary: Visualisation and exploration of brain atlases and other anatomical data
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  Author-email: "Federico Claudi, Adam Tyson, Luigi Petrucco" <hello@brainglobe.info>
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  License: BSD-3-Clause
@@ -25,10 +25,10 @@ License-File: LICENSE
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  Requires-Dist: brainglobe-atlasapi>=2.0.1
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  Requires-Dist: brainglobe-space>=1.0.0
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  Requires-Dist: brainglobe-utils>=0.5.0
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- Requires-Dist: h5py<3.16.0
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+ Requires-Dist: h5py
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  Requires-Dist: k3d
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  Requires-Dist: loguru
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- Requires-Dist: morphapi>=0.2.1
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+ Requires-Dist: morphapi>=0.3.3
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  Requires-Dist: msgpack
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  Requires-Dist: myterial
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  Requires-Dist: numpy
@@ -1,10 +1,10 @@
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  brainglobe-atlasapi>=2.0.1
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  brainglobe-space>=1.0.0
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  brainglobe-utils>=0.5.0
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- h5py<3.16.0
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+ h5py
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  k3d
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  loguru
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- morphapi>=0.2.1
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+ morphapi>=0.3.3
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  msgpack
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  myterial
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  numpy
@@ -12,10 +12,10 @@ dependencies = [
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  "brainglobe-atlasapi>=2.0.1",
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  "brainglobe-space>=1.0.0",
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  "brainglobe-utils>=0.5.0",
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- "h5py<3.16.0",
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+ "h5py",
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  "k3d",
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  "loguru",
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- "morphapi>=0.2.1",
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+ "morphapi>=0.3.3",
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  "msgpack",
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  "myterial",
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  "numpy",
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