PyPI - brainglobe - Versions diffs - 1.0.4__tar.gz → 1.2.0__tar.gz - Mend

brainglobe 1.0.4tar.gz → 1.2.0tar.gz

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Files changed (20) hide show

{brainglobe-1.0.4 → brainglobe-1.2.0}/.github/workflows/test_and_deploy.yml RENAMED Viewed

@@ -38,20 +38,26 @@ jobs:
     strategy:
       matrix:
         # Run all supported Python versions on linux
-        python-version: ["3.9", "3.10"]
+        python-version: ["3.10", "3.11", "3.12"]
         os: [ubuntu-latest]
         # Include one windows and macos run
         include:
-        - os: macos-latest
-          python-version: "3.10"
+        - os: macos-13 # Intel Mac
+          python-version: "3.12"
+        - os: macos-latest # ARM Mac
+          python-version: "3.12"
         - os: windows-latest
-          python-version: "3.10"
+          python-version: "3.12"
     steps:
       # Run tests
+      - name: install HDF5 libs on ARM Mac
+        if: matrix.os == 'macos-latest'
+        run: brew install hdf5
       - uses: neuroinformatics-unit/actions/test@v2
         with:
           python-version: ${{ matrix.python-version }}
+          secret-codecov-token: ${{ secrets.CODECOV_TOKEN }}
   build_sdist_wheels:
     name: Build source distribution

{brainglobe-1.0.4 → brainglobe-1.2.0}/PKG-INFO RENAMED Viewed

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: brainglobe
-Version: 1.0.4
+Version: 1.2.0
 Summary: Python-based tools for computational neuroanatomy.
 Author-email: BrainGlobe Developers <hello@brainglobe.info>
 License: BSD-3-Clause
@@ -13,23 +13,24 @@ Project-URL: twitter, https://twitter.com/brain_globe
 Classifier: Development Status :: 2 - Pre-Alpha
 Classifier: Programming Language :: Python
 Classifier: Programming Language :: Python :: 3
-Classifier: Programming Language :: Python :: 3.9
 Classifier: Programming Language :: Python :: 3.10
+Classifier: Programming Language :: Python :: 3.11
+Classifier: Programming Language :: Python :: 3.12
 Classifier: Operating System :: OS Independent
 Classifier: License :: OSI Approved :: BSD License
-Requires-Python: >=3.9.0
+Requires-Python: >=3.10.0
 Description-Content-Type: text/markdown
 License-File: LICENSE
-Requires-Dist: brainglobe-atlasapi<3,>=2.0.1
-Requires-Dist: brainglobe-heatmap<1,>=0.5.2
+Requires-Dist: brainglobe-atlasapi<3,>=2.0.6
+Requires-Dist: brainglobe-heatmap<1,>=0.5.3
 Requires-Dist: brainglobe-napari-io<1,>=0.3.4
-Requires-Dist: brainglobe-segmentation<2,>=1.2.3
-Requires-Dist: brainglobe-space<2,>=1.0.0
-Requires-Dist: brainglobe-utils<1,>=0.4.2
-Requires-Dist: brainreg[napari]<2,>=1.0.7
+Requires-Dist: brainglobe-segmentation<2,>=1.2.4
+Requires-Dist: brainglobe-space<2,>=1.0.2
+Requires-Dist: brainglobe-utils<1,>=0.5.0
+Requires-Dist: brainreg[napari]<2,>=1.0.9
 Requires-Dist: brainrender-napari<1,>=0.0.3
-Requires-Dist: brainrender<3,>=2.1.6
-Requires-Dist: cellfinder[napari]<2,>=1.1.1
+Requires-Dist: brainrender<3,>=2.1.9
+Requires-Dist: cellfinder[napari]<2,>=1.3.0
 Requires-Dist: napari[all]
 Provides-Extra: dev
 Requires-Dist: pytest; extra == "dev"

{brainglobe-1.0.4 → brainglobe-1.2.0}/brainglobe.egg-info/PKG-INFO RENAMED Viewed

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: brainglobe
-Version: 1.0.4
+Version: 1.2.0
 Summary: Python-based tools for computational neuroanatomy.
 Author-email: BrainGlobe Developers <hello@brainglobe.info>
 License: BSD-3-Clause
@@ -13,23 +13,24 @@ Project-URL: twitter, https://twitter.com/brain_globe
 Classifier: Development Status :: 2 - Pre-Alpha
 Classifier: Programming Language :: Python
 Classifier: Programming Language :: Python :: 3
-Classifier: Programming Language :: Python :: 3.9
 Classifier: Programming Language :: Python :: 3.10
+Classifier: Programming Language :: Python :: 3.11
+Classifier: Programming Language :: Python :: 3.12
 Classifier: Operating System :: OS Independent
 Classifier: License :: OSI Approved :: BSD License
-Requires-Python: >=3.9.0
+Requires-Python: >=3.10.0
 Description-Content-Type: text/markdown
 License-File: LICENSE
-Requires-Dist: brainglobe-atlasapi<3,>=2.0.1
-Requires-Dist: brainglobe-heatmap<1,>=0.5.2
+Requires-Dist: brainglobe-atlasapi<3,>=2.0.6
+Requires-Dist: brainglobe-heatmap<1,>=0.5.3
 Requires-Dist: brainglobe-napari-io<1,>=0.3.4
-Requires-Dist: brainglobe-segmentation<2,>=1.2.3
-Requires-Dist: brainglobe-space<2,>=1.0.0
-Requires-Dist: brainglobe-utils<1,>=0.4.2
-Requires-Dist: brainreg[napari]<2,>=1.0.7
+Requires-Dist: brainglobe-segmentation<2,>=1.2.4
+Requires-Dist: brainglobe-space<2,>=1.0.2
+Requires-Dist: brainglobe-utils<1,>=0.5.0
+Requires-Dist: brainreg[napari]<2,>=1.0.9
 Requires-Dist: brainrender-napari<1,>=0.0.3
-Requires-Dist: brainrender<3,>=2.1.6
-Requires-Dist: cellfinder[napari]<2,>=1.1.1
+Requires-Dist: brainrender<3,>=2.1.9
+Requires-Dist: cellfinder[napari]<2,>=1.3.0
 Requires-Dist: napari[all]
 Provides-Extra: dev
 Requires-Dist: pytest; extra == "dev"

brainglobe-1.2.0/brainglobe.egg-info/requires.txt ADDED Viewed

@@ -0,0 +1,22 @@
+brainglobe-atlasapi<3,>=2.0.6
+brainglobe-heatmap<1,>=0.5.3
+brainglobe-napari-io<1,>=0.3.4
+brainglobe-segmentation<2,>=1.2.4
+brainglobe-space<2,>=1.0.2
+brainglobe-utils<1,>=0.5.0
+brainreg[napari]<2,>=1.0.9
+brainrender-napari<1,>=0.0.3
+brainrender<3,>=2.1.9
+cellfinder[napari]<2,>=1.3.0
+napari[all]
+[dev]
+pytest
+pytest-cov
+coverage
+tox
+black
+mypy
+pre-commit
+ruff
+setuptools_scm

{brainglobe-1.0.4 → brainglobe-1.2.0}/pyproject.toml RENAMED Viewed

@@ -3,7 +3,7 @@ name = "brainglobe"
 authors = [{ name = "BrainGlobe Developers", email = "hello@brainglobe.info" }]
 description = "Python-based tools for computational neuroanatomy."
 readme = "README.md"
-requires-python = ">=3.9.0"
+requires-python = ">=3.10.0"
 dynamic = ["version"]
 license = { text = "BSD-3-Clause" }
@@ -12,23 +12,24 @@ classifiers = [
   "Development Status :: 2 - Pre-Alpha",
   "Programming Language :: Python",
   "Programming Language :: Python :: 3",
-  "Programming Language :: Python :: 3.9",
   "Programming Language :: Python :: 3.10",
+  "Programming Language :: Python :: 3.11",
+  "Programming Language :: Python :: 3.12",
   "Operating System :: OS Independent",
   "License :: OSI Approved :: BSD License",
 ]
 dependencies = [
-  "brainglobe-atlasapi>=2.0.1,<3",
-  "brainglobe-heatmap>=0.5.2,<1",
+  "brainglobe-atlasapi>=2.0.6,<3",
+  "brainglobe-heatmap>=0.5.3,<1",
   "brainglobe-napari-io>=0.3.4,<1",
-  "brainglobe-segmentation>=1.2.3,<2",
-  "brainglobe-space>=1.0.0,<2",
-  "brainglobe-utils>=0.4.2,<1",
-  "brainreg[napari]>=1.0.7,<2",
+  "brainglobe-segmentation>=1.2.4,<2",
+  "brainglobe-space>=1.0.2,<2",
+  "brainglobe-utils>=0.5.0,<1",
+  "brainreg[napari]>=1.0.9,<2",
   "brainrender-napari>=0.0.3,<1",
-  "brainrender>=2.1.6,<3",
-  "cellfinder[napari]>=1.1.1,<2",
+  "brainrender>=2.1.9,<3",
+  "cellfinder[napari]>=1.3.0,<2",
   "napari[all]",
   # brainglobe-napari [WIP],
 ]
@@ -69,7 +70,7 @@ exclude = ["tests*"]
 addopts = "--cov=brainglobe"
 [tool.black]
-target-version = ['py39', 'py310']
+target-version = ['py310', 'py311', 'py312']
 skip-string-normalization = false
 line-length = 79
@@ -93,13 +94,14 @@ fix = true
 [tool.tox]
 legacy_tox_ini = """
 [tox]
-envlist = py{39,310}
+envlist = py{39,310,311}
 isolated_build = True
 [gh-actions]
 python =
-    3.9: py39
     3.10: py310
+    3.11: py311
+    3.12: py312
 [testenv]
 extras =

brainglobe-1.0.4/brainglobe.egg-info/requires.txt DELETED Viewed

@@ -1,22 +0,0 @@
-brainglobe-atlasapi<3,>=2.0.1
-brainglobe-heatmap<1,>=0.5.2
-brainglobe-napari-io<1,>=0.3.4
-brainglobe-segmentation<2,>=1.2.3
-brainglobe-space<2,>=1.0.0
-brainglobe-utils<1,>=0.4.2
-brainreg[napari]<2,>=1.0.7
-brainrender-napari<1,>=0.0.3
-brainrender<3,>=2.1.6
-cellfinder[napari]<2,>=1.1.1
-napari[all]
-[dev]
-pytest
-pytest-cov
-coverage
-tox
-black
-mypy
-pre-commit
-ruff
-setuptools_scm