braindecode 0.5__tar.gz → 0.6__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- Braindecode-0.6/.circleci/artifact_path +1 -0
- Braindecode-0.6/.circleci/config.yml +56 -0
- Braindecode-0.6/.github/workflows/flake8.yaml +23 -0
- Braindecode-0.6/.github/workflows/link-to-doc.yaml +13 -0
- Braindecode-0.6/.github/workflows/push-artifact-to-circleci.yml +47 -0
- Braindecode-0.6/.github/workflows/tests-and-docs.yml +98 -0
- Braindecode-0.6/.gitignore +63 -0
- {Braindecode-0.5 → Braindecode-0.6}/Braindecode.egg-info/PKG-INFO +14 -13
- Braindecode-0.6/Braindecode.egg-info/SOURCES.txt +228 -0
- {Braindecode-0.5 → Braindecode-0.6}/Braindecode.egg-info/top_level.txt +1 -0
- Braindecode-0.6/CONTRIBUTING.md +265 -0
- {Braindecode-0.5 → Braindecode-0.6}/PKG-INFO +14 -13
- {Braindecode-0.5 → Braindecode-0.6}/README.rst +13 -12
- Braindecode-0.6/bandit.yml +1 -0
- Braindecode-0.6/braindecode/augmentation/__init__.py +23 -0
- Braindecode-0.6/braindecode/augmentation/base.py +188 -0
- Braindecode-0.6/braindecode/augmentation/functional.py +997 -0
- Braindecode-0.6/braindecode/augmentation/transforms.py +1097 -0
- Braindecode-0.6/braindecode/classifier.py +321 -0
- {Braindecode-0.5 → Braindecode-0.6}/braindecode/datasets/__init__.py +5 -2
- Braindecode-0.6/braindecode/datasets/base.py +613 -0
- {Braindecode-0.5 → Braindecode-0.6}/braindecode/datasets/bbci.py +64 -29
- Braindecode-0.6/braindecode/datasets/bcicomp.py +179 -0
- {Braindecode-0.5 → Braindecode-0.6}/braindecode/datasets/mne.py +20 -5
- {Braindecode-0.5 → Braindecode-0.6}/braindecode/datasets/moabb.py +55 -16
- Braindecode-0.6/braindecode/datasets/sleep_physionet.py +108 -0
- Braindecode-0.6/braindecode/datasets/tuh.py +306 -0
- {Braindecode-0.5 → Braindecode-0.6}/braindecode/datasets/xy.py +17 -14
- Braindecode-0.6/braindecode/datautil/__init__.py +33 -0
- Braindecode-0.6/braindecode/datautil/mne.py +9 -0
- Braindecode-0.6/braindecode/datautil/preprocess.py +12 -0
- Braindecode-0.6/braindecode/datautil/serialization.py +262 -0
- {Braindecode-0.5 → Braindecode-0.6}/braindecode/datautil/util.py +6 -2
- Braindecode-0.6/braindecode/datautil/windowers.py +6 -0
- Braindecode-0.6/braindecode/datautil/xy.py +9 -0
- Braindecode-0.6/braindecode/models/__init__.py +17 -0
- {Braindecode-0.5 → Braindecode-0.6}/braindecode/models/deep4.py +19 -8
- {Braindecode-0.5 → Braindecode-0.6}/braindecode/models/eegnet.py +27 -9
- {Braindecode-0.5 → Braindecode-0.6}/braindecode/models/eegresnet.py +19 -15
- {Braindecode-0.5 → Braindecode-0.6}/braindecode/models/functions.py +4 -0
- {Braindecode-0.5 → Braindecode-0.6}/braindecode/models/hybrid.py +18 -6
- {Braindecode-0.5 → Braindecode-0.6}/braindecode/models/modules.py +48 -7
- {Braindecode-0.5 → Braindecode-0.6}/braindecode/models/shallow_fbcsp.py +14 -6
- Braindecode-0.6/braindecode/models/sleep_stager_blanco_2020.py +124 -0
- Braindecode-0.6/braindecode/models/sleep_stager_chambon_2018.py +122 -0
- Braindecode-0.6/braindecode/models/sleep_stager_eldele_2021.py +395 -0
- Braindecode-0.6/braindecode/models/tcn.py +155 -0
- Braindecode-0.6/braindecode/models/tidnet.py +262 -0
- Braindecode-0.6/braindecode/models/usleep.py +290 -0
- Braindecode-0.6/braindecode/models/util.py +139 -0
- Braindecode-0.6/braindecode/preprocessing/__init__.py +5 -0
- Braindecode-0.6/braindecode/preprocessing/preprocess.py +487 -0
- Braindecode-0.6/braindecode/preprocessing/windowers.py +628 -0
- Braindecode-0.6/braindecode/regressor.py +309 -0
- Braindecode-0.6/braindecode/samplers/__init__.py +5 -0
- Braindecode-0.6/braindecode/samplers/base.py +276 -0
- Braindecode-0.6/braindecode/samplers/ssl.py +118 -0
- Braindecode-0.6/braindecode/training/__init__.py +8 -0
- {Braindecode-0.5 → Braindecode-0.6}/braindecode/training/callbacks.py +5 -1
- Braindecode-0.6/braindecode/training/losses.py +110 -0
- {Braindecode-0.5 → Braindecode-0.6}/braindecode/training/scoring.py +199 -27
- {Braindecode-0.5 → Braindecode-0.6}/braindecode/util.py +95 -11
- Braindecode-0.6/braindecode/version.py +1 -0
- Braindecode-0.6/braindecode/visualization/__init__.py +6 -0
- Braindecode-0.6/braindecode/visualization/confusion_matrices.py +245 -0
- {Braindecode-0.5 → Braindecode-0.6}/braindecode/visualization/gradients.py +18 -7
- Braindecode-0.6/codecov.yml +14 -0
- Braindecode-0.6/docs/.ipynb_checkpoints/index-checkpoint.rst +129 -0
- {Braindecode-0.5 → Braindecode-0.6}/docs/Makefile +5 -0
- Braindecode-0.6/docs/_build/html/_downloads/0b5ce52c808a6ba6c8e9d78fa3fdb68a/plot_color.ipynb +68 -0
- {Braindecode-0.5 → Braindecode-0.6}/docs/_build/html/_downloads/1224801107d6c3b138edf8ee33de0561/plot_bcic_iv_2a_moabb_cropped.ipynb +15 -15
- {Braindecode-0.5/docs/auto_examples → Braindecode-0.6/docs/_build/html/_downloads/176a7695926ccfe061692c4af12b673d}/plot_dataset_example.ipynb +15 -15
- {Braindecode-0.5/docs/auto_examples → Braindecode-0.6/docs/_build/html/_downloads/25408d8d92a873e370d4750ba414b84a}/benchmark_lazy_eager_loading.ipynb +7 -7
- Braindecode-0.6/docs/_build/html/_downloads/3e0455c88adcaa2571230abb981020db/plot_relative_positioning.ipynb +375 -0
- Braindecode-0.6/docs/_build/html/_downloads/4855a497085ac8dc60a648bf4a72d647/plot_load_save_datasets.ipynb +180 -0
- {Braindecode-0.5 → Braindecode-0.6}/docs/_build/html/_downloads/49b1f19a86467aeaf762a1550583a845/plot_custom_dataset_example.ipynb +39 -10
- Braindecode-0.6/docs/_build/html/_downloads/5bafba0488197e377d459780399abb29/plot_sleep_staging.ipynb +293 -0
- {Braindecode-0.5/docs/auto_examples → Braindecode-0.6/docs/_build/html/_downloads/748680401b0360239d00624375dd9587}/plot_bcic_iv_2a_moabb_trial.ipynb +16 -16
- Braindecode-0.6/docs/_build/html/_downloads/8c06a965e21b52d199f98636388aaa21/tuh_eeg_corpus.ipynb +180 -0
- Braindecode-0.6/docs/_build/html/_downloads/9c64c2c15907a661b1fe2d7dd209a434/plot_regression.ipynb +54 -0
- Braindecode-0.6/docs/_build/html/_downloads/9d9b9ce2b20299db6129837e390cf198/plot_lukas.ipynb +198 -0
- Braindecode-0.6/docs/_build/html/_downloads/b38e40c9ee338673865922575e84fd7f/plot_split_dataset.ipynb +184 -0
- {Braindecode-0.5/docs/auto_examples → Braindecode-0.6/docs/_build/html/_downloads/e42b5bd97033be02521040b0d5ee21c3}/plot_mne_dataset_example.ipynb +5 -5
- Braindecode-0.6/docs/_static/cropped_explanation.png +0 -0
- Braindecode-0.6/docs/_static/trialwise_explanation.png +0 -0
- Braindecode-0.6/docs/_templates/autosummary/class.rst +37 -0
- Braindecode-0.6/docs/api.rst +235 -0
- {Braindecode-0.5/docs/_build/html/_downloads/25408d8d92a873e370d4750ba414b84a → Braindecode-0.6/docs/auto_examples}/benchmark_lazy_eager_loading.ipynb +7 -7
- {Braindecode-0.5 → Braindecode-0.6}/docs/auto_examples/benchmark_lazy_eager_loading.rst +49 -10
- Braindecode-0.6/docs/auto_examples/index.rst +332 -0
- {Braindecode-0.5 → Braindecode-0.6}/docs/auto_examples/plot_bcic_iv_2a_moabb_cropped.ipynb +15 -15
- {Braindecode-0.5 → Braindecode-0.6}/docs/auto_examples/plot_bcic_iv_2a_moabb_cropped.rst +93 -67
- {Braindecode-0.5/docs/_build/html/_downloads/748680401b0360239d00624375dd9587 → Braindecode-0.6/docs/auto_examples}/plot_bcic_iv_2a_moabb_trial.ipynb +16 -16
- Braindecode-0.6/docs/auto_examples/plot_bcic_iv_2a_moabb_trial.rst +764 -0
- Braindecode-0.6/docs/auto_examples/plot_color.ipynb +68 -0
- Braindecode-0.6/docs/auto_examples/plot_color.rst +141 -0
- {Braindecode-0.5 → Braindecode-0.6}/docs/auto_examples/plot_custom_dataset_example.ipynb +39 -10
- Braindecode-0.6/docs/auto_examples/plot_custom_dataset_example.rst +375 -0
- {Braindecode-0.5/docs/_build/html/_downloads/176a7695926ccfe061692c4af12b673d → Braindecode-0.6/docs/auto_examples}/plot_dataset_example.ipynb +15 -15
- Braindecode-0.6/docs/auto_examples/plot_dataset_example.rst +938 -0
- Braindecode-0.6/docs/auto_examples/plot_load_save_datasets.ipynb +180 -0
- Braindecode-0.6/docs/auto_examples/plot_load_save_datasets.rst +530 -0
- Braindecode-0.6/docs/auto_examples/plot_lukas.ipynb +198 -0
- Braindecode-0.6/docs/auto_examples/plot_lukas.rst +487 -0
- {Braindecode-0.5/docs/_build/html/_downloads/e42b5bd97033be02521040b0d5ee21c3 → Braindecode-0.6/docs/auto_examples}/plot_mne_dataset_example.ipynb +5 -5
- Braindecode-0.6/docs/auto_examples/plot_mne_dataset_example.rst +414 -0
- Braindecode-0.6/docs/auto_examples/plot_regression.ipynb +54 -0
- {Braindecode-0.5 → Braindecode-0.6}/docs/auto_examples/plot_regression.rst +108 -15
- Braindecode-0.6/docs/auto_examples/plot_relative_positioning.ipynb +375 -0
- Braindecode-0.6/docs/auto_examples/plot_relative_positioning.rst +1005 -0
- Braindecode-0.6/docs/auto_examples/plot_sleep_staging.ipynb +293 -0
- Braindecode-0.6/docs/auto_examples/plot_sleep_staging.rst +672 -0
- Braindecode-0.6/docs/auto_examples/plot_split_dataset.ipynb +184 -0
- Braindecode-0.6/docs/auto_examples/plot_split_dataset.rst +664 -0
- Braindecode-0.6/docs/auto_examples/sg_execution_times.rst +38 -0
- Braindecode-0.6/docs/auto_examples/tuh_eeg_corpus.ipynb +180 -0
- Braindecode-0.6/docs/auto_examples/tuh_eeg_corpus.rst +353 -0
- {Braindecode-0.5 → Braindecode-0.6}/docs/conf.py +10 -4
- {Braindecode-0.5 → Braindecode-0.6}/docs/generated/braindecode.classifier.EEGClassifier.rst +1 -1
- {Braindecode-0.5 → Braindecode-0.6}/docs/generated/braindecode.datasets.BaseConcatDataset.rst +1 -1
- {Braindecode-0.5 → Braindecode-0.6}/docs/generated/braindecode.datasets.BaseDataset.rst +1 -1
- {Braindecode-0.5 → Braindecode-0.6}/docs/generated/braindecode.datasets.MOABBDataset.rst +1 -1
- Braindecode-0.6/docs/generated/braindecode.datasets.SleepPhysionet.rst +14 -0
- Braindecode-0.6/docs/generated/braindecode.datasets.TUH.rst +14 -0
- Braindecode-0.6/docs/generated/braindecode.datasets.TUHAbnormal.rst +14 -0
- {Braindecode-0.5 → Braindecode-0.6}/docs/generated/braindecode.datasets.WindowsDataset.rst +1 -1
- {Braindecode-0.5 → Braindecode-0.6}/docs/generated/braindecode.datasets.create_from_X_y.rst +1 -1
- {Braindecode-0.5 → Braindecode-0.6}/docs/generated/braindecode.datasets.create_from_mne_epochs.rst +1 -1
- {Braindecode-0.5 → Braindecode-0.6}/docs/generated/braindecode.datasets.create_from_mne_raw.rst +1 -1
- Braindecode-0.6/docs/generated/braindecode.datautil.load_concat_dataset.rst +12 -0
- Braindecode-0.6/docs/generated/braindecode.datautil.save_concat_dataset.rst +12 -0
- {Braindecode-0.5 → Braindecode-0.6}/docs/generated/braindecode.models.Deep4Net.rst +1 -1
- {Braindecode-0.5 → Braindecode-0.6}/docs/generated/braindecode.models.EEGNetv1.rst +1 -1
- {Braindecode-0.5 → Braindecode-0.6}/docs/generated/braindecode.models.EEGNetv4.rst +1 -1
- {Braindecode-0.5 → Braindecode-0.6}/docs/generated/braindecode.models.EEGResNet.rst +1 -1
- {Braindecode-0.5 → Braindecode-0.6}/docs/generated/braindecode.models.HybridNet.rst +1 -1
- {Braindecode-0.5 → Braindecode-0.6}/docs/generated/braindecode.models.ShallowFBCSPNet.rst +1 -1
- Braindecode-0.6/docs/generated/braindecode.models.SleepStagerChambon2018.rst +14 -0
- Braindecode-0.6/docs/generated/braindecode.models.TCN.rst +14 -0
- Braindecode-0.6/docs/generated/braindecode.models.TIDNet.rst +14 -0
- Braindecode-0.6/docs/generated/braindecode.models.get_output_shape.rst +12 -0
- Braindecode-0.6/docs/generated/braindecode.preprocessing.Preprocessor.rst +14 -0
- Braindecode-0.6/docs/generated/braindecode.preprocessing.create_fixed_length_windows.rst +12 -0
- Braindecode-0.6/docs/generated/braindecode.preprocessing.create_windows_from_events.rst +12 -0
- Braindecode-0.6/docs/generated/braindecode.preprocessing.exponential_moving_demean.rst +12 -0
- Braindecode-0.6/docs/generated/braindecode.preprocessing.exponential_moving_standardize.rst +12 -0
- Braindecode-0.6/docs/generated/braindecode.preprocessing.filterbank.rst +12 -0
- Braindecode-0.6/docs/generated/braindecode.preprocessing.preprocess.rst +12 -0
- Braindecode-0.6/docs/generated/braindecode.preprocessing.scale.rst +12 -0
- Braindecode-0.6/docs/generated/braindecode.preprocessing.zscore.rst +12 -0
- {Braindecode-0.5 → Braindecode-0.6}/docs/generated/braindecode.regressor.EEGRegressor.rst +1 -1
- Braindecode-0.6/docs/generated/braindecode.samplers.RecordingSampler.rst +14 -0
- Braindecode-0.6/docs/generated/braindecode.samplers.RelativePositioningSampler.rst +14 -0
- {Braindecode-0.5 → Braindecode-0.6}/docs/generated/braindecode.training.CroppedLoss.rst +1 -1
- {Braindecode-0.5 → Braindecode-0.6}/docs/generated/braindecode.training.CroppedTrialEpochScoring.rst +1 -1
- {Braindecode-0.5 → Braindecode-0.6}/docs/generated/braindecode.training.PostEpochTrainScoring.rst +1 -1
- {Braindecode-0.5 → Braindecode-0.6}/docs/generated/braindecode.training.trial_preds_from_window_preds.rst +1 -1
- {Braindecode-0.5 → Braindecode-0.6}/docs/generated/braindecode.util.set_random_seeds.rst +1 -1
- Braindecode-0.6/docs/generated/braindecode.visualization.compute_amplitude_gradients.rst +12 -0
- {Braindecode-0.5 → Braindecode-0.6}/docs/index.rst +15 -5
- Braindecode-0.6/docs/requirements.txt +6 -0
- Braindecode-0.6/docs/sphinxext/gh_substitutions.py +30 -0
- Braindecode-0.6/docs/whats_new.rst +121 -0
- Braindecode-0.6/environment.yml +22 -0
- Braindecode-0.6/examples/README.rst +2 -0
- Braindecode-0.6/examples/benchmark_lazy_eager_loading.py +319 -0
- Braindecode-0.6/examples/plot_bcic_iv_2a_moabb_cropped.py +348 -0
- Braindecode-0.6/examples/plot_bcic_iv_2a_moabb_trial.py +317 -0
- Braindecode-0.6/examples/plot_bcic_iv_4_ecog_cropped.py +435 -0
- Braindecode-0.6/examples/plot_bcic_iv_4_ecog_trial.py +394 -0
- Braindecode-0.6/examples/plot_benchmark_preprocessing.py +167 -0
- Braindecode-0.6/examples/plot_custom_dataset_example.py +64 -0
- Braindecode-0.6/examples/plot_data_augmentation.py +275 -0
- Braindecode-0.6/examples/plot_dataset_example.py +140 -0
- Braindecode-0.6/examples/plot_load_save_datasets.py +97 -0
- Braindecode-0.6/examples/plot_mne_dataset_example.py +60 -0
- Braindecode-0.6/examples/plot_regression.py +140 -0
- Braindecode-0.6/examples/plot_relative_positioning.py +533 -0
- Braindecode-0.6/examples/plot_sleep_staging_usleep.py +316 -0
- Braindecode-0.6/examples/plot_split_dataset.py +74 -0
- Braindecode-0.6/examples/plot_tuh_discrete_multitarget.py +101 -0
- Braindecode-0.6/examples/plot_tuh_eeg_corpus.py +243 -0
- Braindecode-0.6/requirements.txt +8 -0
- {Braindecode-0.5 → Braindecode-0.6}/setup.cfg +5 -2
- {Braindecode-0.5 → Braindecode-0.6}/setup.py +1 -1
- Braindecode-0.6/test/acceptance_tests/test_cropped_decoding.py +172 -0
- Braindecode-0.6/test/acceptance_tests/test_eeg_classifier.py +260 -0
- Braindecode-0.6/test/acceptance_tests/test_model_architectures.py +54 -0
- Braindecode-0.6/test/acceptance_tests/test_trialwise_decoding.py +168 -0
- Braindecode-0.6/test/acceptance_tests/test_variable_length_trials_decoding.py +106 -0
- Braindecode-0.6/test/unit_tests/__init__.py +0 -0
- Braindecode-0.6/test/unit_tests/augmentation/__init__.py +0 -0
- Braindecode-0.6/test/unit_tests/augmentation/conftest.py +56 -0
- Braindecode-0.6/test/unit_tests/augmentation/test_base.py +175 -0
- Braindecode-0.6/test/unit_tests/augmentation/test_transforms.py +666 -0
- Braindecode-0.6/test/unit_tests/datasets/__init__.py +0 -0
- Braindecode-0.6/test/unit_tests/datasets/test_bcicomp.py +116 -0
- Braindecode-0.6/test/unit_tests/datasets/test_dataset.py +403 -0
- Braindecode-0.6/test/unit_tests/datasets/test_mne.py +146 -0
- Braindecode-0.6/test/unit_tests/datasets/test_sleep_physionet.py +46 -0
- Braindecode-0.6/test/unit_tests/datasets/test_tuh.py +177 -0
- Braindecode-0.6/test/unit_tests/datasets/test_xy.py +33 -0
- Braindecode-0.6/test/unit_tests/datautil/__init__.py +0 -0
- Braindecode-0.6/test/unit_tests/datautil/test_serialization.py +337 -0
- Braindecode-0.6/test/unit_tests/models/__init__.py +0 -0
- Braindecode-0.6/test/unit_tests/models/test_models.py +281 -0
- Braindecode-0.6/test/unit_tests/models/test_modules.py +30 -0
- Braindecode-0.6/test/unit_tests/models/test_util.py +76 -0
- Braindecode-0.6/test/unit_tests/preprocessing/__init__.py +0 -0
- Braindecode-0.6/test/unit_tests/preprocessing/test_preprocess.py +452 -0
- Braindecode-0.6/test/unit_tests/preprocessing/test_windowers.py +651 -0
- Braindecode-0.6/test/unit_tests/samplers/test_samplers.py +203 -0
- Braindecode-0.6/test/unit_tests/test_eeg_classifier.py +148 -0
- Braindecode-0.6/test/unit_tests/test_eeg_regressor.py +148 -0
- Braindecode-0.6/test/unit_tests/test_util.py +46 -0
- Braindecode-0.6/test/unit_tests/training/__init__.py +0 -0
- Braindecode-0.6/test/unit_tests/training/test_losses.py +73 -0
- Braindecode-0.6/test/unit_tests/training/test_scoring.py +431 -0
- Braindecode-0.6/test/unit_tests/visualization/__init__.py +0 -0
- Braindecode-0.6/test/unit_tests/visualization/test_gradients.py +37 -0
- Braindecode-0.5/Braindecode.egg-info/SOURCES.txt +0 -110
- Braindecode-0.5/braindecode/classifier.py +0 -188
- Braindecode-0.5/braindecode/datasets/base.py +0 -140
- Braindecode-0.5/braindecode/datasets/tuh.py +0 -113
- Braindecode-0.5/braindecode/datautil/__init__.py +0 -6
- Braindecode-0.5/braindecode/datautil/preprocess.py +0 -253
- Braindecode-0.5/braindecode/datautil/windowers.py +0 -315
- Braindecode-0.5/braindecode/experiments/bcic_iv_2a/config.py +0 -119
- Braindecode-0.5/braindecode/experiments/bcic_iv_2a/run.py +0 -230
- Braindecode-0.5/braindecode/models/__init__.py +0 -9
- Braindecode-0.5/braindecode/models/util.py +0 -66
- Braindecode-0.5/braindecode/regressor.py +0 -187
- Braindecode-0.5/braindecode/training/__init__.py +0 -8
- Braindecode-0.5/braindecode/training/losses.py +0 -15
- Braindecode-0.5/braindecode/version.py +0 -1
- Braindecode-0.5/braindecode/visualization/__init__.py +0 -3
- Braindecode-0.5/docs/_build/html/_downloads/9c64c2c15907a661b1fe2d7dd209a434/plot_regression.ipynb +0 -54
- Braindecode-0.5/docs/_templates/autosummary/class.rst +0 -14
- Braindecode-0.5/docs/api.rst +0 -125
- Braindecode-0.5/docs/auto_examples/index.rst +0 -178
- Braindecode-0.5/docs/auto_examples/plot_bcic_iv_2a_moabb_trial.rst +0 -441
- Braindecode-0.5/docs/auto_examples/plot_custom_dataset_example.rst +0 -130
- Braindecode-0.5/docs/auto_examples/plot_dataset_example.rst +0 -411
- Braindecode-0.5/docs/auto_examples/plot_mne_dataset_example.rst +0 -139
- Braindecode-0.5/docs/auto_examples/plot_regression.ipynb +0 -54
- Braindecode-0.5/docs/auto_examples/sg_execution_times.rst +0 -24
- Braindecode-0.5/docs/generated/braindecode.datautil.create_fixed_length_windows.rst +0 -12
- Braindecode-0.5/docs/generated/braindecode.datautil.create_windows_from_events.rst +0 -12
- Braindecode-0.5/docs/generated/braindecode.datautil.exponential_moving_demean.rst +0 -12
- Braindecode-0.5/docs/generated/braindecode.datautil.exponential_moving_standardize.rst +0 -12
- Braindecode-0.5/docs/generated/braindecode.datautil.scale.rst +0 -12
- Braindecode-0.5/docs/generated/braindecode.datautil.zscore.rst +0 -12
- Braindecode-0.5/docs/notebooks/Untitled.ipynb +0 -334
- Braindecode-0.5/docs/source/braindecode.datasets.rst +0 -51
- Braindecode-0.5/docs/source/braindecode.datautil.rst +0 -75
- Braindecode-0.5/docs/source/braindecode.experiments.bcic_iv_2a.rst +0 -27
- Braindecode-0.5/docs/source/braindecode.experiments.rst +0 -14
- Braindecode-0.5/docs/source/braindecode.models.rst +0 -75
- Braindecode-0.5/docs/source/braindecode.rst +0 -78
- Braindecode-0.5/docs/source/braindecode.visualization.rst +0 -51
- Braindecode-0.5/docs/source/modules.rst +0 -7
- {Braindecode-0.5 → Braindecode-0.6}/Braindecode.egg-info/dependency_links.txt +0 -0
- {Braindecode-0.5 → Braindecode-0.6}/Braindecode.egg-info/not-zip-safe +0 -0
- {Braindecode-0.5 → Braindecode-0.6}/Braindecode.egg-info/requires.txt +2 -2
- {Braindecode-0.5 → Braindecode-0.6}/LICENSE.txt +0 -0
- {Braindecode-0.5 → Braindecode-0.6}/MANIFEST.in +0 -0
- {Braindecode-0.5 → Braindecode-0.6}/braindecode/__init__.py +0 -0
- {Braindecode-0.5 → Braindecode-0.6}/docs/_templates/autosummary/function.rst +0 -0
- {Braindecode-0.5/braindecode/experiments → Braindecode-0.6/test}/__init__.py +0 -0
- {Braindecode-0.5/braindecode/experiments/bcic_iv_2a → Braindecode-0.6/test/acceptance_tests}/__init__.py +0 -0
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# Tagging a commit with [circle front] will build the front page and perform test-doc.
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ls -ahl .
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- html
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workflows:
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default:
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equal: [ "none", << pipeline.parameters.github-artifact-url >> ]
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- dummy_job
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on: [pull_request]
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Flake8-Codestyle-Check:
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run:
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- name: Checking Out Repository
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uses: actions/checkout@v2
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uses: actions/setup-python@v2
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python-version: "3.8"
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run: pip install flake8
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- name: Run Flake8
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uses: liskin/gh-problem-matcher-wrap@v1
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with:
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linters: flake8
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run: flake8 .
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circleci_artifacts_redirector:
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name: Run CircleCI artifacts redirector
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- name: GitHub Action step
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uses: larsoner/circleci-artifacts-redirector-action@master
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with:
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repo-token: ${{ secrets.GITHUB_TOKEN }}
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circleci-jobs: fetch_docs_from_github
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job-title: Check rendered doc here!
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name: push-artifact-to-circle-ci
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# will be changed to on workflow_run
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workflow_run:
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workflows: ["tests-and-docs"]
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types:
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- completed
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jobs:
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Push-Artifact-to-CircleCI:
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if: ${{ github.event.workflow_run.conclusion == 'success' }}
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runs-on: ubuntu-latest
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defaults:
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shell: bash -l {0}
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- name: Trigger CircleCI download and publication of HTML Doc Artifact
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echo "automated curl"
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PR_NUMBER=$(curl -H "Accept: application/vnd.github.groot-preview+json" https://api.github.com/repos/$REPO_NAME/commits/$COMMIT_SHA/pulls 2>/dev/null | jq '.[0].number')
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echo $PR_NUMBER
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# Use Pull Request Number to trigger pipeline on CircleCI which will just download artifact,
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# unzip it and make it available for browsing
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curl --request POST \
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--url https://circleci.com/api/v2/project/gh/braindecode/braindecode/pipeline \
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--header "Circle-Token: $CIRCLECI_TOKEN" \
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--header 'content-type: application/json' \
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--header 'x-attribution-actor-id: github_actions' \
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--header 'x-attribution-login: github_actions' \
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--data \{\"branch\":\"pull/$PR_NUMBER/head\",\"parameters\":\{\"github-artifact-url\":\"https://nightly.link/braindecode/braindecode/actions/runs/$RUN_ID/HTML-Docs.zip\"\}\}
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# Just for debugging
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echo "EVENT_OBJ"
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name: tests-and-docs
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on:
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pull_request:
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push:
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branches: master
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jobs:
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Install-Test-Doc-Braindecode:
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runs-on: ubuntu-latest
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strategy:
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fail-fast: false
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matrix:
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defaults:
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run:
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shell: bash -l {0}
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steps:
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## Install Braindecode
|
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- name: Checking Out Repository
|
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uses: actions/checkout@v2
|
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# Cache MNE Data
|
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# The cache key here is fixed except for os
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# so if you download a new mne dataset in the code, best to manually increment the key below
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- name: Create/Restore MNE Data Cache
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id: cache-mne_data
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uses: actions/cache@v2
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with:
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path: ~/mne_data
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key: ${{ runner.os }}-v3
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- name: Setting Up Conda Braindecode Environment
|
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uses: conda-incubator/setup-miniconda@v2
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with:
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environment-file: environment.yml
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python-version: 3.7
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activate-environment: braindecode
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auto-activate-base: false
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# Show Conda and Python Versions
|
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- run: conda --version
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- run: conda info --envs
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- run: which python
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# Install MOABB as well
|
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- name: Install MOABB
|
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run: pip install moabb
|
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# Use skorch github master if requested, otherwise has been installed via conda in environment.yaml
|
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- name: Install Skorch development version from git repo
|
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if: ${{ matrix.skorch_version == 'main' }}
|
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run: pip install git+https://github.com/skorch-dev/skorch.git
|
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- name: Install Braindecode from Current Checkout
|
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run: pip install -e .
|
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# Show Braindecode Version
|
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- run: python -c "import braindecode; print(braindecode.__version__)"
|
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|
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## Run Tests
|
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- name: Install Codecov etc.
|
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run: pip install --upgrade pytest pytest-cov codecov
|
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- name: Run Tests # See https://stackoverflow.com/a/59959080/1469195 for the cov-report logic
|
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run: pytest --cov=braindecode test/ --cov-report term --cov-report xml:coverage.xml
|
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- name: Upload Coverage to Codecov
|
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uses: codecov/codecov-action@v1
|
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with:
|
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fail_ci_if_error: true
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file: ./coverage.xml
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path_to_write_report: ./codecov_report.txt
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- name: Upload Codecov Coverage report for checking
|
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uses: actions/upload-artifact@v2
|
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with:
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name: codecov-report
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path: ./codecov_report.txt
|
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|
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## Create Sphinx Documentation
|
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- name: Install Docs Requirements
|
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run: python -m pip install --upgrade -r docs/requirements.txt
|
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- name: Install newer versions scikit learn scipy to prevent error # should be removed once moabb reason is clearer
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run: pip install --upgrade scipy scikit-learn
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- name: Install newer version of sphinx-gallery # should be removed sphinx-gallery with v0.10
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run: pip install -U https://api.github.com/repos/sphinx-gallery/sphinx-gallery/zipball/master
|
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- name: Create Docs
|
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run: |
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cd docs
|
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make html
|
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- name: Upload HTML Docs as Artifacts
|
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uses: actions/upload-artifact@v2
|
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with:
|
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name: HTML-Docs
|
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path: ./docs/_build/
|
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- name: Deploy to Github Pages if on Master
|
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if: ${{ github.event_name == 'push' && github.ref == 'refs/heads/master' && matrix.skorch_version == 'stable'}}
|
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uses: peaceiris/actions-gh-pages@v3
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with:
|
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deploy_key: ${{ secrets.ACTIONS_DEPLOY_KEY }}
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external_repository: braindecode/braindecode.github.io
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destination_dir: master
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publish_branch: master
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publish_dir: ./docs/_build/html
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cname: braindecode.org
|
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junit-results.xml
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*.pyc
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*.pyo
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*.sh
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*.so
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*.tar.gz
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*.log
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*~
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.#*
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*.swp
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*.lprof
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*.npy
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*.zip
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*.tar.*
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*.egg*
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*.tmproj
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*.png
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*.dat
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.DS_Store
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auto_examples
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build
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coverage
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.cache/
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.pytest_cache/
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__pycache__/
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prof/
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.ipynb_checkpoints
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dist/
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docs/_build/
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docs/generated/
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docs/auto_examples/
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docs/auto_tutorials/
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docs/modules/generated/
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docs/sphinxext/cachedir
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docs/source
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pip-log.txt
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.coverage*
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tags
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