boris-behav-obs 9.6__tar.gz → 9.6.1__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (123) hide show
  1. {boris_behav_obs-9.6/boris_behav_obs.egg-info → boris_behav_obs-9.6.1}/PKG-INFO +1 -1
  2. boris_behav_obs-9.6.1/boris/analysis_plugins/number_of_occurences_by_independent_variable.py +54 -0
  3. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/version.py +2 -2
  4. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1/boris_behav_obs.egg-info}/PKG-INFO +1 -1
  5. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/pyproject.toml +1 -1
  6. boris_behav_obs-9.6/boris/analysis_plugins/number_of_occurences_by_independent_variable.py +0 -34
  7. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/LICENSE.TXT +0 -0
  8. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/MANIFEST.in +0 -0
  9. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/README.TXT +0 -0
  10. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/README.md +0 -0
  11. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/__init__.py +0 -0
  12. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/__main__.py +0 -0
  13. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/about.py +0 -0
  14. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/add_modifier.py +0 -0
  15. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/add_modifier_ui.py +0 -0
  16. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/advanced_event_filtering.py +0 -0
  17. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/analysis_plugins/__init__.py +0 -0
  18. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/analysis_plugins/_latency.py +0 -0
  19. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/analysis_plugins/list_of_dataframe_columns.py +0 -0
  20. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/analysis_plugins/number_of_occurences.py +0 -0
  21. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/analysis_plugins/time_budget.py +0 -0
  22. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/behav_coding_map_creator.py +0 -0
  23. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/behavior_binary_table.py +0 -0
  24. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/behaviors_coding_map.py +0 -0
  25. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/boris_cli.py +0 -0
  26. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/cmd_arguments.py +0 -0
  27. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/coding_pad.py +0 -0
  28. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/config.py +0 -0
  29. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/config_file.py +0 -0
  30. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/connections.py +0 -0
  31. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/converters.py +0 -0
  32. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/converters_ui.py +0 -0
  33. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/cooccurence.py +0 -0
  34. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/core.py +0 -0
  35. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/core_qrc.py +0 -0
  36. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/core_ui.py +0 -0
  37. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/db_functions.py +0 -0
  38. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/dev.py +0 -0
  39. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/dialog.py +0 -0
  40. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/duration_widget.py +0 -0
  41. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/edit_event.py +0 -0
  42. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/edit_event_ui.py +0 -0
  43. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/event_operations.py +0 -0
  44. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/events_cursor.py +0 -0
  45. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/events_snapshots.py +0 -0
  46. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/exclusion_matrix.py +0 -0
  47. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/export_events.py +0 -0
  48. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/export_observation.py +0 -0
  49. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/external_processes.py +0 -0
  50. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/geometric_measurement.py +0 -0
  51. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/gui_utilities.py +0 -0
  52. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/image_overlay.py +0 -0
  53. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/import_observations.py +0 -0
  54. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/irr.py +0 -0
  55. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/latency.py +0 -0
  56. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/measurement_widget.py +0 -0
  57. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/media_file.py +0 -0
  58. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/menu_options.py +0 -0
  59. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/modifier_coding_map_creator.py +0 -0
  60. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/modifiers_coding_map.py +0 -0
  61. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/mpv-1.0.3.py +0 -0
  62. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/mpv.py +0 -0
  63. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/mpv2.py +0 -0
  64. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/observation.py +0 -0
  65. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/observation_operations.py +0 -0
  66. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/observation_ui.py +0 -0
  67. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/observations_list.py +0 -0
  68. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/otx_parser.py +0 -0
  69. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/param_panel.py +0 -0
  70. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/param_panel_ui.py +0 -0
  71. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/player_dock_widget.py +0 -0
  72. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/plot_data_module.py +0 -0
  73. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/plot_events.py +0 -0
  74. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/plot_events_rt.py +0 -0
  75. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/plot_spectrogram_rt.py +0 -0
  76. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/plot_waveform_rt.py +0 -0
  77. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/plugins.py +0 -0
  78. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/portion/__init__.py +0 -0
  79. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/portion/const.py +0 -0
  80. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/portion/dict.py +0 -0
  81. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/portion/func.py +0 -0
  82. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/portion/interval.py +0 -0
  83. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/portion/io.py +0 -0
  84. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/preferences.py +0 -0
  85. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/preferences_ui.py +0 -0
  86. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/project.py +0 -0
  87. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/project_functions.py +0 -0
  88. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/project_import_export.py +0 -0
  89. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/project_ui.py +0 -0
  90. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/qrc_boris.py +0 -0
  91. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/qrc_boris5.py +0 -0
  92. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/select_modifiers.py +0 -0
  93. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/select_observations.py +0 -0
  94. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/select_subj_behav.py +0 -0
  95. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/state_events.py +0 -0
  96. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/subjects_pad.py +0 -0
  97. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/synthetic_time_budget.py +0 -0
  98. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/time_budget_functions.py +0 -0
  99. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/time_budget_widget.py +0 -0
  100. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/transitions.py +0 -0
  101. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/utilities.py +0 -0
  102. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/video_equalizer.py +0 -0
  103. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/video_equalizer_ui.py +0 -0
  104. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/video_operations.py +0 -0
  105. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/view_df.py +0 -0
  106. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/view_df_ui.py +0 -0
  107. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris/write_event.py +0 -0
  108. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris_behav_obs.egg-info/SOURCES.txt +0 -0
  109. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris_behav_obs.egg-info/dependency_links.txt +0 -0
  110. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris_behav_obs.egg-info/entry_points.txt +0 -0
  111. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris_behav_obs.egg-info/requires.txt +0 -0
  112. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/boris_behav_obs.egg-info/top_level.txt +0 -0
  113. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/setup.cfg +0 -0
  114. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/tests/test_db_functions.py +0 -0
  115. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/tests/test_export_observation.py +0 -0
  116. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/tests/test_irr.py +0 -0
  117. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/tests/test_observation_gui.py +0 -0
  118. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/tests/test_otx_parser.py +0 -0
  119. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/tests/test_preferences_gui.py +0 -0
  120. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/tests/test_project_functions.py +0 -0
  121. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/tests/test_time_budget.py +0 -0
  122. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/tests/test_utilities.py +0 -0
  123. {boris_behav_obs-9.6 → boris_behav_obs-9.6.1}/tests/test_utilities2.py +0 -0
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: boris-behav-obs
3
- Version: 9.6
3
+ Version: 9.6.1
4
4
  Summary: BORIS - Behavioral Observation Research Interactive Software
5
5
  Author-email: Olivier Friard <olivier.friard@unito.it>
6
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  License-Expression: GPL-3.0-only
@@ -0,0 +1,54 @@
1
+ """
2
+ BORIS plugin
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+
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+ number of occurences of behaviors by independent_variable
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+ """
6
+
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+ import pandas as pd
8
+
9
+ __version__ = "0.4.0"
10
+ __version_date__ = "2025-07-17"
11
+ __plugin_name__ = "Number of occurences of behaviors by subject by independent_variable"
12
+ __author__ = "Olivier Friard - University of Torino - Italy"
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+
14
+
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+ def run(df: pd.DataFrame):
16
+ """
17
+ Calculate the number of occurrences of behaviors by subject and by independent_variable.
18
+
19
+ This plugin returns a Pandas dataframe
20
+ """
21
+
22
+ df_results_list: list = []
23
+
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+ flag_variable_found = False
25
+
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+ for column in df.columns:
27
+ if isinstance(column, tuple) or (isinstance(column, str) and not column.startswith("independent variable '")):
28
+ continue
29
+
30
+ flag_variable_found = True
31
+ grouped_df: df.DataFrame = (
32
+ df.groupby(
33
+ [
34
+ column,
35
+ "Subject",
36
+ "Behavior",
37
+ ]
38
+ )["Behavior"]
39
+ .count()
40
+ .reset_index(name="number of occurences")
41
+ )
42
+
43
+ grouped_df.rename(columns={column: "Value"}, inplace=True)
44
+
45
+ grouped_df.insert(0, "independent variable name", column)
46
+
47
+ df_results_list.append(grouped_df)
48
+
49
+ df_results = pd.concat(df_results_list, ignore_index=True) if df_results_list else pd.DataFrame([])
50
+
51
+ if not flag_variable_found:
52
+ return "No independent variable found"
53
+ else:
54
+ return df_results
@@ -20,5 +20,5 @@ This file is part of BORIS.
20
20
 
21
21
  """
22
22
 
23
- __version__ = "9.6"
24
- __version_date__ = "2025-07-15"
23
+ __version__ = "9.6.1"
24
+ __version_date__ = "2025-07-17"
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: boris-behav-obs
3
- Version: 9.6
3
+ Version: 9.6.1
4
4
  Summary: BORIS - Behavioral Observation Research Interactive Software
5
5
  Author-email: Olivier Friard <olivier.friard@unito.it>
6
6
  License-Expression: GPL-3.0-only
@@ -1,6 +1,6 @@
1
1
  [project]
2
2
  name = "boris-behav-obs"
3
- version = "9.6"
3
+ version = "9.6.1"
4
4
  description = "BORIS - Behavioral Observation Research Interactive Software"
5
5
  authors = [{ name="Olivier Friard", email="olivier.friard@unito.it" }]
6
6
  readme = "README.md"
@@ -1,34 +0,0 @@
1
- """
2
- BORIS plugin
3
-
4
- number of occurences of behaviors by independent_variable
5
- """
6
-
7
- import pandas as pd
8
-
9
- __version__ = "0.3.0"
10
- __version_date__ = "2025-03-17"
11
- __plugin_name__ = "Number of occurences of behaviors by subject by independent_variable"
12
- __author__ = "Olivier Friard - University of Torino - Italy"
13
-
14
-
15
- def run(df: pd.DataFrame):
16
- """
17
- Calculate the number of occurrences of behaviors by subject and by independent_variable.
18
-
19
- This plugin returns a Pandas dataframe
20
- """
21
-
22
- df_results: df.DataFrame = (
23
- df.groupby(
24
- [
25
- "independent variable 'Weather'",
26
- "Subject",
27
- "Behavior",
28
- ]
29
- )["Behavior"]
30
- .count()
31
- .reset_index(name="number of occurences")
32
- )
33
-
34
- return df_results
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