bone-microarchitecture 0.2.2__tar.gz → 0.2.4__tar.gz
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- bone_microarchitecture-0.2.4/CHANGELOG.md +8 -0
- bone_microarchitecture-0.2.4/MANIFEST.in +1 -0
- {bone_microarchitecture-0.2.2/src/bone_microarchitecture.egg-info → bone_microarchitecture-0.2.4}/PKG-INFO +4 -2
- {bone_microarchitecture-0.2.2 → bone_microarchitecture-0.2.4}/README.md +2 -0
- {bone_microarchitecture-0.2.2 → bone_microarchitecture-0.2.4}/pyproject.toml +2 -2
- {bone_microarchitecture-0.2.2 → bone_microarchitecture-0.2.4}/src/bone_microarchitecture/batch.py +386 -75
- {bone_microarchitecture-0.2.2 → bone_microarchitecture-0.2.4}/src/bone_microarchitecture/cli.py +2 -0
- {bone_microarchitecture-0.2.2 → bone_microarchitecture-0.2.4}/src/bone_microarchitecture/pipeline.py +4 -0
- {bone_microarchitecture-0.2.2 → bone_microarchitecture-0.2.4}/src/bone_microarchitecture/results.py +3 -0
- {bone_microarchitecture-0.2.2 → bone_microarchitecture-0.2.4/src/bone_microarchitecture.egg-info}/PKG-INFO +4 -2
- {bone_microarchitecture-0.2.2 → bone_microarchitecture-0.2.4}/src/bone_microarchitecture.egg-info/SOURCES.txt +2 -0
- {bone_microarchitecture-0.2.2 → bone_microarchitecture-0.2.4}/src/bone_microarchitecture.egg-info/requires.txt +1 -1
- {bone_microarchitecture-0.2.2 → bone_microarchitecture-0.2.4}/tests/test_batch.py +521 -14
- {bone_microarchitecture-0.2.2 → bone_microarchitecture-0.2.4}/tests/test_pipeline.py +29 -5
- {bone_microarchitecture-0.2.2 → bone_microarchitecture-0.2.4}/LICENSE +0 -0
- {bone_microarchitecture-0.2.2 → bone_microarchitecture-0.2.4}/setup.cfg +0 -0
- {bone_microarchitecture-0.2.2 → bone_microarchitecture-0.2.4}/src/bone_microarchitecture/__init__.py +0 -0
- {bone_microarchitecture-0.2.2 → bone_microarchitecture-0.2.4}/src/bone_microarchitecture/geometry.py +0 -0
- {bone_microarchitecture-0.2.2 → bone_microarchitecture-0.2.4}/src/bone_microarchitecture/metal.py +0 -0
- {bone_microarchitecture-0.2.2 → bone_microarchitecture-0.2.4}/src/bone_microarchitecture/metrics.py +0 -0
- {bone_microarchitecture-0.2.2 → bone_microarchitecture-0.2.4}/src/bone_microarchitecture/opencl.py +0 -0
- {bone_microarchitecture-0.2.2 → bone_microarchitecture-0.2.4}/src/bone_microarchitecture/thickness.py +0 -0
- {bone_microarchitecture-0.2.2 → bone_microarchitecture-0.2.4}/src/bone_microarchitecture.egg-info/dependency_links.txt +0 -0
- {bone_microarchitecture-0.2.2 → bone_microarchitecture-0.2.4}/src/bone_microarchitecture.egg-info/entry_points.txt +0 -0
- {bone_microarchitecture-0.2.2 → bone_microarchitecture-0.2.4}/src/bone_microarchitecture.egg-info/top_level.txt +0 -0
- {bone_microarchitecture-0.2.2 → bone_microarchitecture-0.2.4}/tests/test_attribution.py +0 -0
- {bone_microarchitecture-0.2.2 → bone_microarchitecture-0.2.4}/tests/test_backends.py +0 -0
- {bone_microarchitecture-0.2.2 → bone_microarchitecture-0.2.4}/tests/test_geometry.py +0 -0
- {bone_microarchitecture-0.2.2 → bone_microarchitecture-0.2.4}/tests/test_metrics.py +0 -0
- {bone_microarchitecture-0.2.2 → bone_microarchitecture-0.2.4}/tests/test_package.py +0 -0
- {bone_microarchitecture-0.2.2 → bone_microarchitecture-0.2.4}/tests/test_results.py +0 -0
- {bone_microarchitecture-0.2.2 → bone_microarchitecture-0.2.4}/tests/test_thickness.py +0 -0
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# Changelog
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## 0.2.4 - 2026-10-02
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### Fixed
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- Recognize canonical `bone_segmentation`, `periosteal_mask`, `trabecular_mask`, and `cortical_mask` roles in shared contour batch inputs, including BoneContours sidecars.
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- Record the current package version in batch derivative manifests.
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include CHANGELOG.md
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Metadata-Version: 2.4
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Name: bone-microarchitecture
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Version: 0.2.
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Version: 0.2.4
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Summary: Lightweight bone microarchitecture measurements from masks and calibrated grayscale arrays.
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Author: Matthias Walle
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License-Expression: MIT
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Requires-Python: >=3.10
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Description-Content-Type: text/markdown
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License-File: LICENSE
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Requires-Dist: bone-imaging-derivatives>=0.1.
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Requires-Dist: bone-imaging-derivatives>=0.1.4
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Requires-Dist: numpy>=1.23
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Requires-Dist: SimpleITK>=2.2
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Requires-Dist: scipy>=1.10
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This package intentionally has no Slicer dependency and no image I/O dependency. Callers are responsible for loading images, calibration, and putting masks on a common grid.
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Batch discovery accepts canonical segmentation, periosteal, trabecular, and cortical roles from shared contour derivatives and their sidecars. See [CHANGELOG.md](CHANGELOG.md) for release notes.
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## GPU Backends
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Exact Hildebrand sphere fitting supports three diameter-accumulation backends:
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This package intentionally has no Slicer dependency and no image I/O dependency. Callers are responsible for loading images, calibration, and putting masks on a common grid.
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Batch discovery accepts canonical segmentation, periosteal, trabecular, and cortical roles from shared contour derivatives and their sidecars. See [CHANGELOG.md](CHANGELOG.md) for release notes.
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## GPU Backends
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Exact Hildebrand sphere fitting supports three diameter-accumulation backends:
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[project]
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name = "bone-microarchitecture"
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version = "0.2.
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version = "0.2.4"
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description = "Lightweight bone microarchitecture measurements from masks and calibrated grayscale arrays."
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readme = "README.md"
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requires-python = ">=3.10"
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"Topic :: Scientific/Engineering :: Medical Science Apps.",
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]
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dependencies = [
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"bone-imaging-derivatives>=0.1.
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"bone-imaging-derivatives>=0.1.4",
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"numpy>=1.23",
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"SimpleITK>=2.2",
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"scipy>=1.10",
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