bluecellulab 2.6.41__tar.gz → 2.6.43__tar.gz

{bluecellulab-2.6.41 → bluecellulab-2.6.43}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.2
 Name: bluecellulab
-Version: 2.6.41
+Version: 2.6.43
 Summary: Biologically detailed neural network simulations and analysis.
 Author: Blue Brain Project, EPFL
 License: Apache2.0
@@ -166,6 +166,7 @@ Copyright
 =========
 
 Copyright (c) 2023-2024 Blue Brain Project/EPFL
+
 Copyright (c) 2025 Open Brain Institute
 
 This work is licensed under `Apache 2.0 <https://www.apache.org/licenses/LICENSE-2.0.html>`_

{bluecellulab-2.6.41 → bluecellulab-2.6.43}/README.rst

@@ -136,6 +136,7 @@ Copyright
 =========
 
 Copyright (c) 2023-2024 Blue Brain Project/EPFL
+
 Copyright (c) 2025 Open Brain Institute
 
 This work is licensed under `Apache 2.0 <https://www.apache.org/licenses/LICENSE-2.0.html>`_

{bluecellulab-2.6.41 → bluecellulab-2.6.43}/bluecellulab/analysis/inject_sequence.py

@@ -30,7 +30,7 @@ class Recording(NamedTuple):
     current: np.ndarray
     voltage: np.ndarray
     time: np.ndarray
-    spike: np.ndarray | None
+    spike: Optional[np.ndarray] = None
 
 
 StimulusRecordings = Dict[str, Recording]
@@ -46,7 +46,7 @@ def run_stimulus(
     recording_section: str = "soma[0]",
     recording_segment: float = 0.5,
     enable_spike_detection: bool = False,
-    threshold_spike_detection: float = -30,
+    threshold_spike_detection: float = -30.0,
 ) -> Recording:
     """Creates a cell from template parameters, applies a stimulus, and records
     the response.
@@ -135,9 +135,9 @@ def apply_multiple_stimuli(
     stimulus_name: StimulusName,
     amplitudes: Sequence[float],
     threshold_based: bool = True,
-    section_name: str | None = None,
+    section_name: Optional[str] = None,
     segment: float = 0.5,
-    n_processes: int | None = None,
+    n_processes: Optional[int] = None,
     cvode: bool = True,
     add_hypamp: bool = True,
 ) -> StimulusRecordings:

{bluecellulab-2.6.41 → bluecellulab-2.6.43}/bluecellulab/cell/injector.py

@@ -280,7 +280,7 @@ class InjectableMixin:
             rng = neuron.h.Random()
             rng.Random123(seed1, seed2, seed3)
         else:
-            raise BluecellulabError("Shot noise stimulus requires Random123")
+            raise BluecellulabError("Ornstein-Uhlenbeck noise stimulus requires Random123")
 
         self.persistent.append(rng)
         return rng