bluecellulab 2.6.34__tar.gz → 2.6.36__tar.gz

{bluecellulab-2.6.34 → bluecellulab-2.6.36}/.github/workflows/release.yml

@@ -25,7 +25,7 @@ jobs:
           python-version: "3.10"
 
       - name: Fetch the tag, if any. If not tagged, create a patch tag
-        uses: anothrNick/github-tag-action@1.70.0
+        uses: anothrNick/github-tag-action@1.71.0
         if: ${{ !startsWith(github.ref, 'refs/tags/') }}
         id: tag
         env:

{bluecellulab-2.6.34 → bluecellulab-2.6.36}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: bluecellulab
-Version: 2.6.34
+Version: 2.6.36
 Summary: Biologically detailed neural network simulations and analysis.
 Author: Blue Brain Project, EPFL
 License: Apache2.0

{bluecellulab-2.6.34 → bluecellulab-2.6.36}/bluecellulab/simulation/simulation.py

@@ -28,13 +28,14 @@ logger = logging.getLogger(__name__)
 class Simulation:
     """Class that represents a neuron simulation."""
 
-    def __init__(self, parallel_context=None) -> None:
+    def __init__(self, parallel_context=None, custom_progress_function=None) -> None:
         self.cells: list[bluecellulab.Cell] = []
         self.fih_progress = None
         self.progress = None
         self.progress_closed = None
         self.progress_dt: Optional[float] = None
         self.pc = parallel_context
+        self.custom_progress_function = custom_progress_function
 
     def add_cell(self, new_cell: bluecellulab.Cell) -> None:
         """Add a cell to a simulation."""
@@ -50,26 +51,29 @@ class Simulation:
 
     def progress_callback(self):
         """Callback function for the progress bar."""
-        if self.progress > 0:
-            sys.stdout.write("\x1b[3F")
-
-        self.progress += 1
-        self.progress_closed = not self.progress_closed
-        if self.progress_closed:
-            sys.stdout.write(" %s%s%s \n" % (" " * (
-                self.progress - 1), " ", " " * (100 - self.progress)))
-            sys.stdout.write("[%s%s%s]\n" % ("#" * (
-                self.progress - 1), "-", "." * (100 - self.progress)))
-            sys.stdout.write(" %s%s%s \n" % (" " * (
-                self.progress - 1), " ", " " * (100 - self.progress)))
+        if self.custom_progress_function is None:
+            if self.progress > 0:
+                sys.stdout.write("\x1b[3F")
+
+            self.progress += 1
+            self.progress_closed = not self.progress_closed
+            if self.progress_closed:
+                sys.stdout.write(" %s%s%s \n" % (" " * (
+                    self.progress - 1), " ", " " * (100 - self.progress)))
+                sys.stdout.write("[%s%s%s]\n" % ("#" * (
+                    self.progress - 1), "-", "." * (100 - self.progress)))
+                sys.stdout.write(" %s%s%s \n" % (" " * (
+                    self.progress - 1), " ", " " * (100 - self.progress)))
+            else:
+                sys.stdout.write(" %s%s%s \n" % (" " * (
+                    self.progress - 1), "/", " " * (100 - self.progress)))
+                sys.stdout.write("[%s%s%s]\n" % ("#" * (
+                    self.progress - 1), ">", "." * (100 - self.progress)))
+                sys.stdout.write(" %s%s%s \n" % (" " * (
+                    self.progress - 1), "\\", " " * (100 - self.progress)))
+            sys.stdout.flush()
         else:
-            sys.stdout.write(" %s%s%s \n" % (" " * (
-                self.progress - 1), "/", " " * (100 - self.progress)))
-            sys.stdout.write("[%s%s%s]\n" % ("#" * (
-                self.progress - 1), ">", "." * (100 - self.progress)))
-            sys.stdout.write(" %s%s%s \n" % (" " * (
-                self.progress - 1), "\\", " " * (100 - self.progress)))
-        sys.stdout.flush()
+            self.custom_progress_function()
 
         neuron.h.cvode.event(
             neuron.h.t + self.progress_dt, self.progress_callback)

{bluecellulab-2.6.34 → bluecellulab-2.6.36}/bluecellulab.egg-info/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: bluecellulab
-Version: 2.6.34
+Version: 2.6.36
 Summary: Biologically detailed neural network simulations and analysis.
 Author: Blue Brain Project, EPFL
 License: Apache2.0