blosc2 3.3.2__tar.gz → 3.3.3__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {blosc2-3.3.2 → blosc2-3.3.3}/.pre-commit-config.yaml +1 -1
- {blosc2-3.3.2 → blosc2-3.3.3}/ANNOUNCE.rst +5 -6
- {blosc2-3.3.2 → blosc2-3.3.3}/CMakeLists.txt +1 -1
- {blosc2-3.3.2 → blosc2-3.3.3}/PKG-INFO +1 -1
- {blosc2-3.3.2 → blosc2-3.3.3}/RELEASE_NOTES.md +28 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/python-blosc2.rst +1 -1
- {blosc2-3.3.2 → blosc2-3.3.3}/pyproject.toml +2 -2
- {blosc2-3.3.2 → blosc2-3.3.3}/src/blosc2/__init__.py +1 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/src/blosc2/blosc2_ext.pyx +2 -1
- {blosc2-3.3.2 → blosc2-3.3.3}/src/blosc2/core.py +34 -26
- {blosc2-3.3.2 → blosc2-3.3.3}/src/blosc2/lazyexpr.py +116 -9
- {blosc2-3.3.2 → blosc2-3.3.3}/src/blosc2/ndarray.py +16 -3
- blosc2-3.3.3/src/blosc2/version.py +1 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/ndarray/test_evaluate.py +1 -1
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/ndarray/test_jit.py +1 -1
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/ndarray/test_lazyexpr.py +49 -42
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/ndarray/test_ndarray.py +8 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/ndarray/test_reductions.py +10 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/ndarray/test_zeros.py +37 -0
- blosc2-3.3.2/src/blosc2/version.py +0 -1
- {blosc2-3.3.2 → blosc2-3.3.3}/.gitignore +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/.guix/modules/python-blosc2-package.scm +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/.guix-channel +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/CONTRIBUTING.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/LICENSE.txt +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/README.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/README_DEVELOPERS.md +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/RELEASING.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/code_of_conduct.md +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/_static/blosc-favicon_32x32.png +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/_static/blosc-favicon_64x64.png +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/_static/blosc-logo_128.png +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/_static/blosc-logo_256.png +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/_static/css/custom.css +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/conf.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/development/code-of-conduct.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/development/contributing.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/development/index.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/getting_started/index.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/getting_started/installation.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/getting_started/overview.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/getting_started/tutorials/01.ndarray-basics.ipynb +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/getting_started/tutorials/02.lazyarray-expressions.ipynb +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/getting_started/tutorials/03.lazyarray-udf.ipynb +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/getting_started/tutorials/04.reductions.ipynb +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/getting_started/tutorials/05.persistent-reductions.ipynb +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/getting_started/tutorials/06.remote_proxy.ipynb +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/getting_started/tutorials/07.schunk-basics.ipynb +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/getting_started/tutorials/08.schunk-slicing_and_beyond.ipynb +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/getting_started/tutorials/10.ucodecs-ufilters.ipynb +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/getting_started/tutorials/11.prefilters.ipynb +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/getting_started/tutorials/12.postfilters.ipynb +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/getting_started/tutorials/images/blosc2-pipeline.png +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/getting_started/tutorials/images/blosc2-pipeline.svg +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/getting_started/tutorials/images/lazyexpr-broadcast.png +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/getting_started/tutorials/images/reductions/3D-cube-plane.png +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/getting_started/tutorials/images/reductions/3D-cube.png +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/getting_started/tutorials/images/reductions/memory-access-2D-x.png +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/getting_started/tutorials/images/reductions/memory-access-2D-y.png +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/getting_started/tutorials/images/remote_proxy.png +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/getting_started/tutorials/images/ucodecs-filters/backward.png +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/getting_started/tutorials/images/ucodecs-filters/backward.svg +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/getting_started/tutorials/images/ucodecs-filters/decoder.png +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/getting_started/tutorials/images/ucodecs-filters/decoder.svg +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/getting_started/tutorials/images/ucodecs-filters/decoder2.png +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/getting_started/tutorials/images/ucodecs-filters/decoder2.svg +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/getting_started/tutorials/images/ucodecs-filters/encoder.png +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/getting_started/tutorials/images/ucodecs-filters/encoder.svg +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/getting_started/tutorials/images/ucodecs-filters/encoder2.png +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/getting_started/tutorials/images/ucodecs-filters/encoder2.svg +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/getting_started/tutorials/images/ucodecs-filters/forward.png +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/getting_started/tutorials/images/ucodecs-filters/forward.svg +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/getting_started/tutorials.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/index.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/array_operations.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.__getitem__.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.__init__.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.__len__.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.__setitem__.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.append_data.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.decompress_chunk.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.delete_chunk.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.fill_special.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.filler.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.get_chunk.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.get_slice.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.insert_chunk.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.insert_data.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.iterchunks.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.iterchunks_info.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.postfilter.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.prefilter.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.remove_postfilter.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.remove_prefilter.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.to_cframe.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.update_chunk.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.update_data.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/c2array.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/classes.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/decorators.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/index.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/lazy_functions.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/lazyarray.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/linear_algebra.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/low_level.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/ndarray.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/ndfield.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/proxy.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/proxyndsource.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/proxysource.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/reduction_functions.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/save_load.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/schunk.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/storage.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/reference/utilities.rst +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/doc/release_notes/index.md +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/btune.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/c2array-get-slice.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/compress2_decompress2.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/compress_decompress.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/filler.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/gil.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/mmap-rw.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ndarray/arange-constructor.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ndarray/asarray_.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ndarray/broadcast_expr.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ndarray/buffer.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ndarray/bytedelta_filter.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ndarray/c2array_expr.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ndarray/compute_expr.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ndarray/compute_fields.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ndarray/compute_udf_numba.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ndarray/compute_where.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ndarray/copy_.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ndarray/empty_.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ndarray/eye-constructor.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ndarray/filter_sort_fields.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ndarray/formats.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ndarray/fromiter-constructor.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ndarray/general_expressions.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ndarray/getitem.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ndarray/iterchunks_info.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ndarray/jit-expr.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ndarray/jit-numpy-funcs.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ndarray/jit-reduc.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ndarray/linspace-constructor.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ndarray/lists-vs-bools-idx.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ndarray/meta.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ndarray/ndarray_copy.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ndarray/ndmean.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ndarray/persistency.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ndarray/proxy-carray.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ndarray/proxy-ndarray.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ndarray/reduce_and_enlarge.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ndarray/reduce_expr.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ndarray/reduce_expr_save.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ndarray/reduce_string_expr.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ndarray/resize_.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ndarray/work_with_numpy.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ndarray/zfp_codec.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/pack_array.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/pack_tensor.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/postfilter1.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/postfilter2.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/postfilter3.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/prefilter.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/save_tensor.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/schunk.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/schunk_roundtrip.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ucodecs.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/ufilters.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/examples/vlmeta.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/generate_version.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/guix.scm +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/images/Complete-Write-Read-B2ND.png +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/images/M1-i386-vs-arm64-pack.png +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/images/M1-i386-vs-arm64-unpack.png +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/images/Read-Partial-Slices-B2ND.png +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/images/b2nd-2level-parts.png +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/images/eval-expr-full-mem-M2.png +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/images/eval-expr-scarce-mem-M2.png +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/images/lazyarray-dask-large.png +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/images/lazyarray-dask-small.png +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/images/lazyarray-expr-large.png +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/images/lazyarray-expr.png +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/images/linspace-compress.png +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/images/linspace-decompress.png +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/images/pack-array-cratios.png +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/images/reduc-float64-amd.png +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/images/reduc-float64-log-amd.png +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/pytest.ini +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/src/blosc2/c2array.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/src/blosc2/helpers.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/src/blosc2/info.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/src/blosc2/proxy.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/src/blosc2/schunk.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/src/blosc2/storage.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/conftest.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/ndarray/test_auto_parts.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/ndarray/test_buffer.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/ndarray/test_c2array_expr.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/ndarray/test_c2array_reductions.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/ndarray/test_c2array_udf.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/ndarray/test_copy.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/ndarray/test_empty.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/ndarray/test_full.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/ndarray/test_get_slice_nchunks.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/ndarray/test_getitem.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/ndarray/test_iterchunks_info.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/ndarray/test_lazyexpr_fields.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/ndarray/test_lazyudf.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/ndarray/test_lossy.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/ndarray/test_matmul.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/ndarray/test_metalayers.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/ndarray/test_mode.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/ndarray/test_nans.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/ndarray/test_numpy.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/ndarray/test_persistency.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/ndarray/test_proxy.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/ndarray/test_proxy_c2array.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/ndarray/test_proxy_expr.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/ndarray/test_resize.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/ndarray/test_setitem.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/ndarray/test_slice.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/ndarray/test_squeeze.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/ndarray/test_struct_dtype.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/ndarray/test_transpose.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/test_bytes_array.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/test_comp_info.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/test_compress2.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/test_compression_parameters.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/test_compressors.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/test_decompress.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/test_iterchunks.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/test_mmap.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/test_open.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/test_open_c2array.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/test_pathlib.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/test_postfilters.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/test_prefilters.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/test_proxy_schunk.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/test_python_blosc.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/test_schunk.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/test_schunk_constructor.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/test_schunk_delete.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/test_schunk_get_slice.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/test_schunk_get_slice_nchunks.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/test_schunk_insert.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/test_schunk_set_slice.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/test_schunk_update.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/test_storage.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/test_tensor.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/test_ucodecs.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/test_ufilters.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/tests/test_vlmeta.py +0 -0
- {blosc2-3.3.2 → blosc2-3.3.3}/update_version.py +0 -0
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Announcing Python-Blosc2 3.3.
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Announcing Python-Blosc2 3.3.3
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improvement). Also, a new version of C-Blosc2 (v2.7.2.dev) that fixes
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GIT_TAG
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GIT_TAG 3f9c085c0c0f357b140fb5a50d1f8df06de3383a # v2.17.1 + mmap fix
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# Release notes
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## Changes from 3.3.2 to 3.3.3
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<p style="text-align: center; color: black; background-color: rgba(230, 169, 9, 0.65);">
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<a href="https://github.com/Blosc/python-blosc2/blob/main/RELEASE_NOTES.md"
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style="font-size: 1.5em;">Version 3.3.
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style="font-size: 1.5em;">Version 3.3.2 released on 2025-05-01!</a>
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# This is yet another heuristic for large CPUs with core sets (CCX) having
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# their own L3. No idea why, but it seems to work well.
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# Try to read the cache size from sysfs
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if size.endswith("K\n"):
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elif size.endswith("G\n"):
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|
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#
|
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|
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# Try with lscpu, if available.
|
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try:
|
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cache_size, cache_instances = get_cache_info(cache_level)
|
|
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# cache_instances typically refers to the number of sockets, CCXs or cores,
|
|
1209
|
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# depending on the CPU and cache level.
|
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|
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# In general, dividing the cache size by the number of instances would bring
|
|
1211
|
+
# best performance for private caches (L1 and L2). For shared caches (L3),
|
|
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|
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# this should be the case as well, but more experimentation is needed.
|
|
1213
|
+
cache_size //= cache_instances
|
|
1214
|
+
return cache_size
|
|
1215
|
+
except (FileNotFoundError, ValueError):
|
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|
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# If lscpu is not available or the cache size cannot be read from sysfs,
|
|
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|
+
# return the default size.
|
|
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|
+
pass
|
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1219
|
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|
|
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1221
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@@ -37,7 +37,7 @@ import numpy as np
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38
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|
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39
39
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from blosc2.info import InfoReporter
|
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40
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from blosc2.ndarray import _check_allowed_dtypes, get_chunks_idx, is_inside_new_expr
|
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40
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from blosc2.ndarray import _check_allowed_dtypes, get_chunks_idx, is_inside_new_expr, process_key
|
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41
41
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42
42
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|
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43
43
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import numexpr
|
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@@ -630,6 +630,107 @@ def get_expr_operands(expression: str) -> set:
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630
630
|
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|
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631
631
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632
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633
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def conserve_functions( # noqa: C901
|
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634
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+
expression: str,
|
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635
|
+
operands_old: dict[str, blosc2.NDArray | blosc2.LazyExpr],
|
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636
|
+
operands_new: dict[str, blosc2.NDArray | blosc2.LazyExpr],
|
|
637
|
+
) -> tuple(str, dict[str, blosc2.NDArray]):
|
|
638
|
+
"""
|
|
639
|
+
Given an expression in string form, return its operands.
|
|
640
|
+
|
|
641
|
+
Parameters
|
|
642
|
+
----------
|
|
643
|
+
expression : str
|
|
644
|
+
The expression in string form.
|
|
645
|
+
|
|
646
|
+
operands_old: dict[str : blosc2.ndarray | blosc2.LazyExpr]
|
|
647
|
+
Dict of operands from expression prior to eval.
|
|
648
|
+
|
|
649
|
+
operands_new: dict[str : blosc2.ndarray | blosc2.LazyExpr]
|
|
650
|
+
Dict of operands from expression after eval.
|
|
651
|
+
Returns
|
|
652
|
+
-------
|
|
653
|
+
newexpression
|
|
654
|
+
A modified string expression with the functions/constructors conserved and
|
|
655
|
+
true operands rebased and written in o- notation.
|
|
656
|
+
newoperands
|
|
657
|
+
Dict of the set of rebased operands.
|
|
658
|
+
"""
|
|
659
|
+
|
|
660
|
+
operand_to_key = {id(v): k for k, v in operands_new.items()}
|
|
661
|
+
for k, v in operands_old.items(): # extend operands_to_key with old operands
|
|
662
|
+
if isinstance(
|
|
663
|
+
v, blosc2.LazyExpr
|
|
664
|
+
): # unroll operands in LazyExpr (only necessary when have reduced a lazyexpr)
|
|
665
|
+
d = v.operands
|
|
666
|
+
else:
|
|
667
|
+
d = {k: v}
|
|
668
|
+
for newk, newv in d.items():
|
|
669
|
+
try:
|
|
670
|
+
operand_to_key[id(newv)]
|
|
671
|
+
except KeyError:
|
|
672
|
+
newk = (
|
|
673
|
+
f"o{len(operands_new)}" if newk in operands_new else newk
|
|
674
|
+
) # possible that names coincide
|
|
675
|
+
operand_to_key[id(newv)] = newk
|
|
676
|
+
operands_new[newk] = newv
|
|
677
|
+
|
|
678
|
+
class OperandVisitor(ast.NodeVisitor):
|
|
679
|
+
def __init__(self):
|
|
680
|
+
self.operandmap = {}
|
|
681
|
+
self.operands = {}
|
|
682
|
+
self.opcounter = 0
|
|
683
|
+
self.function_names = set()
|
|
684
|
+
|
|
685
|
+
def update_func(self, localop):
|
|
686
|
+
k = operand_to_key[id(localop)]
|
|
687
|
+
if k not in self.operandmap:
|
|
688
|
+
newkey = f"o{self.opcounter}"
|
|
689
|
+
self.operands[newkey] = operands_new[k]
|
|
690
|
+
self.operandmap[k] = newkey
|
|
691
|
+
self.opcounter += 1
|
|
692
|
+
return newkey
|
|
693
|
+
else:
|
|
694
|
+
return self.operandmap[k]
|
|
695
|
+
|
|
696
|
+
def visit_Name(self, node):
|
|
697
|
+
if node.id == "np": # Skip NumPy namespace (e.g. np.int8, which will be treated separately)
|
|
698
|
+
return
|
|
699
|
+
if node.id in self.function_names: # Skip function names
|
|
700
|
+
return
|
|
701
|
+
elif node.id not in dtype_symbols:
|
|
702
|
+
localop = operands_old[node.id]
|
|
703
|
+
if isinstance(localop, blosc2.LazyExpr):
|
|
704
|
+
newexpr = localop.expression
|
|
705
|
+
for (
|
|
706
|
+
opname,
|
|
707
|
+
v,
|
|
708
|
+
) in localop.operands.items(): # expression operands already in terms of basic operands
|
|
709
|
+
newopname = self.update_func(v)
|
|
710
|
+
newexpr = re.sub(
|
|
711
|
+
rf"(?<=\s){opname}|(?<=\(){opname}", newopname, newexpr
|
|
712
|
+
) # replace with newopname
|
|
713
|
+
node.id = newexpr
|
|
714
|
+
else:
|
|
715
|
+
node.id = self.update_func(localop)
|
|
716
|
+
else:
|
|
717
|
+
pass
|
|
718
|
+
self.generic_visit(node)
|
|
719
|
+
|
|
720
|
+
def visit_Call(self, node):
|
|
721
|
+
if isinstance(
|
|
722
|
+
node.func, ast.Name
|
|
723
|
+
): # visits Call first, then Name, so don't increment operandcounter yet
|
|
724
|
+
self.function_names.add(node.func.id)
|
|
725
|
+
self.generic_visit(node)
|
|
726
|
+
|
|
727
|
+
tree = ast.parse(expression)
|
|
728
|
+
visitor = OperandVisitor()
|
|
729
|
+
visitor.visit(tree)
|
|
730
|
+
newexpression, newoperands = ast.unparse(tree), visitor.operands
|
|
731
|
+
return newexpression, newoperands
|
|
732
|
+
|
|
733
|
+
|
|
633
734
|
class TransformNumpyCalls(ast.NodeTransformer):
|
|
634
735
|
def __init__(self):
|
|
635
736
|
self.replacements = {}
|
|
@@ -2434,22 +2535,24 @@ class LazyExpr(LazyArray):
|
|
|
2434
2535
|
_globals = get_expr_globals(self.expression)
|
|
2435
2536
|
lazy_expr = eval(self.expression, _globals, self.operands)
|
|
2436
2537
|
if not isinstance(lazy_expr, blosc2.LazyExpr):
|
|
2538
|
+
key, _ = process_key(item, self.shape)
|
|
2437
2539
|
# An immediate evaluation happened (e.g. all operands are numpy arrays)
|
|
2438
2540
|
if hasattr(self, "_where_args"):
|
|
2439
2541
|
# We need to apply the where() operation
|
|
2440
2542
|
if len(self._where_args) == 1:
|
|
2441
2543
|
# We have a single argument
|
|
2442
2544
|
where_x = self._where_args["_where_x"]
|
|
2443
|
-
return where_x[:][lazy_expr]
|
|
2545
|
+
return (where_x[:][lazy_expr])[key]
|
|
2444
2546
|
if len(self._where_args) == 2:
|
|
2445
2547
|
# We have two arguments
|
|
2446
2548
|
where_x = self._where_args["_where_x"]
|
|
2447
2549
|
where_y = self._where_args["_where_y"]
|
|
2448
|
-
return np.where(lazy_expr, where_x, where_y)
|
|
2550
|
+
return np.where(lazy_expr, where_x, where_y)[key]
|
|
2449
2551
|
if hasattr(self, "_output"):
|
|
2450
2552
|
# This is not exactly optimized, but it works for now
|
|
2451
|
-
self._output[:] = lazy_expr
|
|
2452
|
-
|
|
2553
|
+
self._output[:] = lazy_expr[key]
|
|
2554
|
+
return self._output
|
|
2555
|
+
return lazy_expr[key]
|
|
2453
2556
|
|
|
2454
2557
|
return chunked_eval(lazy_expr.expression, lazy_expr.operands, item, **kwargs)
|
|
2455
2558
|
|
|
@@ -2676,10 +2779,14 @@ class LazyExpr(LazyArray):
|
|
|
2676
2779
|
_dtype = new_expr.dtype
|
|
2677
2780
|
_shape = new_expr.shape
|
|
2678
2781
|
if isinstance(new_expr, blosc2.LazyExpr):
|
|
2679
|
-
#
|
|
2680
|
-
|
|
2681
|
-
|
|
2682
|
-
|
|
2782
|
+
# DO NOT restore the original expression and operands
|
|
2783
|
+
# Instead rebase operands and restore only constructors
|
|
2784
|
+
expression_, operands_ = conserve_functions(
|
|
2785
|
+
_expression, _operands, new_expr.operands | local_vars
|
|
2786
|
+
)
|
|
2787
|
+
new_expr.expression = f"({expression_})" # force parenthesis
|
|
2788
|
+
new_expr.expression_tosave = expression
|
|
2789
|
+
new_expr.operands = operands_
|
|
2683
2790
|
new_expr.operands_tosave = operands
|
|
2684
2791
|
else:
|
|
2685
2792
|
# An immediate evaluation happened (e.g. all operands are numpy arrays)
|
|
@@ -2914,6 +2914,8 @@ def _check_shape(shape):
|
|
|
2914
2914
|
shape = (shape,)
|
|
2915
2915
|
elif not isinstance(shape, tuple | list):
|
|
2916
2916
|
raise TypeError("shape should be a tuple or a list!")
|
|
2917
|
+
if len(shape) > blosc2.MAX_DIM:
|
|
2918
|
+
raise ValueError(f"shape length {len(shape)} is too large (>{blosc2.MAX_DIM})!")
|
|
2917
2919
|
return shape
|
|
2918
2920
|
|
|
2919
2921
|
|
|
@@ -3266,7 +3268,9 @@ def arange(
|
|
|
3266
3268
|
|
|
3267
3269
|
|
|
3268
3270
|
# Define a numpy linspace-like function
|
|
3269
|
-
def linspace(
|
|
3271
|
+
def linspace(
|
|
3272
|
+
start, stop, num=None, endpoint=True, dtype=np.float64, shape=None, c_order=True, **kwargs: Any
|
|
3273
|
+
):
|
|
3270
3274
|
"""Return evenly spaced numbers over a specified interval.
|
|
3271
3275
|
|
|
3272
3276
|
This is similar to `numpy.linspace` but it returns a `NDArray`
|
|
@@ -3308,8 +3312,17 @@ def linspace(start, stop, num=50, endpoint=True, dtype=np.float64, shape=None, c
|
|
|
3308
3312
|
stop_ = start_ + lout / num * (stop - start)
|
|
3309
3313
|
output[:] = np.linspace(start_, stop_, lout, endpoint=False, dtype=output.dtype)
|
|
3310
3314
|
|
|
3311
|
-
if
|
|
3312
|
-
shape
|
|
3315
|
+
if shape is None or num is None:
|
|
3316
|
+
if shape is None and num is None:
|
|
3317
|
+
raise ValueError("Either `shape` or `num` must be specified.")
|
|
3318
|
+
if shape is None: # num is not None
|
|
3319
|
+
shape = (num,)
|
|
3320
|
+
else: # num is none
|
|
3321
|
+
num = math.prod(shape)
|
|
3322
|
+
|
|
3323
|
+
# check compatibility of shape and num
|
|
3324
|
+
if math.prod(shape) != num:
|
|
3325
|
+
raise ValueError("The specified shape is not consistent with the specified num value")
|
|
3313
3326
|
dtype = _check_dtype(dtype)
|
|
3314
3327
|
|
|
3315
3328
|
if is_inside_new_expr():
|
|
@@ -0,0 +1 @@
|
|
|
1
|
+
__version__ = "3.3.3"
|
|
@@ -27,7 +27,7 @@ def sample_data(request):
|
|
|
27
27
|
# The jit decorator can work with any numpy or NDArray params in functions
|
|
28
28
|
a = blosc2.linspace(0, 1, shape[0] * shape[1], dtype=dtype, shape=shape)
|
|
29
29
|
b = np.linspace(1, 2, shape[0] * shape[1], dtype=dtype).reshape(shape)
|
|
30
|
-
c = blosc2.linspace(-10, 10, cshape
|
|
30
|
+
c = blosc2.linspace(-10, 10, np.prod(cshape), dtype=dtype, shape=cshape)
|
|
31
31
|
return a, b, c, shape
|
|
32
32
|
|
|
33
33
|
|
|
@@ -26,7 +26,7 @@ def sample_data(request):
|
|
|
26
26
|
# The jit decorator can work with any numpy or NDArray params in functions
|
|
27
27
|
a = blosc2.linspace(0, 1, shape[0] * shape[1], dtype=dtype, shape=shape)
|
|
28
28
|
b = np.linspace(1, 2, shape[0] * shape[1], dtype=dtype).reshape(shape)
|
|
29
|
-
c = blosc2.linspace(-10, 10, cshape
|
|
29
|
+
c = blosc2.linspace(-10, 10, np.prod(cshape), dtype=dtype, shape=cshape)
|
|
30
30
|
return a, b, c, shape
|
|
31
31
|
|
|
32
32
|
|
|
@@ -1354,45 +1354,52 @@ def test_chain_expressions():
|
|
|
1354
1354
|
le3_ = blosc2.lazyexpr("(le2 & (b < 0))", {"le2": le2_, "b": b})
|
|
1355
1355
|
assert (le3_[:] == le3[:]).all()
|
|
1356
1356
|
|
|
1357
|
-
|
|
1358
|
-
|
|
1359
|
-
|
|
1360
|
-
|
|
1361
|
-
|
|
1362
|
-
|
|
1363
|
-
|
|
1364
|
-
|
|
1365
|
-
|
|
1366
|
-
|
|
1367
|
-
|
|
1368
|
-
|
|
1369
|
-
#
|
|
1370
|
-
#
|
|
1371
|
-
#
|
|
1372
|
-
#
|
|
1373
|
-
#
|
|
1374
|
-
#
|
|
1375
|
-
|
|
1376
|
-
|
|
1377
|
-
#
|
|
1378
|
-
|
|
1379
|
-
|
|
1380
|
-
|
|
1381
|
-
|
|
1382
|
-
|
|
1383
|
-
|
|
1384
|
-
|
|
1385
|
-
|
|
1386
|
-
|
|
1387
|
-
|
|
1388
|
-
|
|
1389
|
-
|
|
1390
|
-
|
|
1391
|
-
|
|
1392
|
-
|
|
1393
|
-
|
|
1394
|
-
|
|
1395
|
-
|
|
1396
|
-
|
|
1397
|
-
|
|
1398
|
-
|
|
1357
|
+
le1 = a**3 + blosc2.sin(a**2)
|
|
1358
|
+
le2 = le1 < c
|
|
1359
|
+
le3 = b < 0
|
|
1360
|
+
le4 = le2 & le3
|
|
1361
|
+
le1_ = blosc2.lazyexpr("a ** 3 + sin(a ** 2)", {"a": a})
|
|
1362
|
+
le2_ = blosc2.lazyexpr("(le1 < c)", {"le1": le1_, "c": c})
|
|
1363
|
+
le3_ = blosc2.lazyexpr("(b < 0)", {"b": b})
|
|
1364
|
+
le4_ = blosc2.lazyexpr("(le2 & le3)", {"le2": le2_, "le3": le3_})
|
|
1365
|
+
assert (le4_[:] == le4[:]).all()
|
|
1366
|
+
|
|
1367
|
+
# TODO: Eventually this test should pass
|
|
1368
|
+
# expr1 = blosc2.lazyexpr("arange(N) + b")
|
|
1369
|
+
# expr2 = blosc2.lazyexpr("a * b + 1")
|
|
1370
|
+
# expr = blosc2.lazyexpr("expr1 - expr2")
|
|
1371
|
+
# expr_final = blosc2.lazyexpr("expr * expr")
|
|
1372
|
+
# nres = (expr * expr)[:]
|
|
1373
|
+
# res = expr_final.compute()
|
|
1374
|
+
# np.testing.assert_allclose(res[:], nres)
|
|
1375
|
+
|
|
1376
|
+
|
|
1377
|
+
# Test the chaining of multiple persistent lazy expressions
|
|
1378
|
+
def test_chain_persistentexpressions():
|
|
1379
|
+
N = 1_000
|
|
1380
|
+
dtype = "float64"
|
|
1381
|
+
a = blosc2.linspace(0, 1, N * N, dtype=dtype, shape=(N, N), urlpath="a.b2nd", mode="w")
|
|
1382
|
+
b = blosc2.linspace(1, 2, N * N, dtype=dtype, shape=(N, N), urlpath="b.b2nd", mode="w")
|
|
1383
|
+
c = blosc2.linspace(0, 1, N, dtype=dtype, shape=(N,), urlpath="c.b2nd", mode="w")
|
|
1384
|
+
|
|
1385
|
+
le1 = a**3 + blosc2.sin(a**2)
|
|
1386
|
+
le2 = le1 < c
|
|
1387
|
+
le3 = b < 0
|
|
1388
|
+
le4 = le2 & le3
|
|
1389
|
+
|
|
1390
|
+
le1_ = blosc2.lazyexpr("a ** 3 + sin(a ** 2)", {"a": a})
|
|
1391
|
+
le1_.save("expr1.b2nd", mode="w")
|
|
1392
|
+
myle1 = blosc2.open("expr1.b2nd")
|
|
1393
|
+
|
|
1394
|
+
le2_ = blosc2.lazyexpr("(le1 < c)", {"le1": myle1, "c": c})
|
|
1395
|
+
le2_.save("expr2.b2nd", mode="w")
|
|
1396
|
+
myle2 = blosc2.open("expr2.b2nd")
|
|
1397
|
+
|
|
1398
|
+
le3_ = blosc2.lazyexpr("(b < 0)", {"b": b})
|
|
1399
|
+
le3_.save("expr3.b2nd", mode="w")
|
|
1400
|
+
myle3 = blosc2.open("expr3.b2nd")
|
|
1401
|
+
|
|
1402
|
+
le4_ = blosc2.lazyexpr("(le2 & le3)", {"le2": myle2, "le3": myle3})
|
|
1403
|
+
le4_.save("expr4.b2nd", mode="w")
|
|
1404
|
+
myle4 = blosc2.open("expr4.b2nd")
|
|
1405
|
+
assert (myle4[:] == le4[:]).all()
|
|
@@ -187,6 +187,14 @@ def test_linspace(ss, shape, dtype, chunks, blocks, endpoint, c_order):
|
|
|
187
187
|
else:
|
|
188
188
|
# This is chunk order, so testing is more laborious, and not really necessary
|
|
189
189
|
pass
|
|
190
|
+
with pytest.raises(ValueError):
|
|
191
|
+
a = blosc2.linspace(start, stop, 10, shape=(20,)) # num incompatible with shape
|
|
192
|
+
with pytest.raises(ValueError):
|
|
193
|
+
a = blosc2.linspace(start, stop) # num or shape should be specified
|
|
194
|
+
a = blosc2.linspace(start, stop, shape=(20,)) # should have length 20
|
|
195
|
+
assert a.shape == (20,)
|
|
196
|
+
a = blosc2.linspace(start, stop, num=20) # should have length 20
|
|
197
|
+
assert a.shape == (20,)
|
|
190
198
|
|
|
191
199
|
|
|
192
200
|
@pytest.mark.parametrize(("N", "M"), [(10, None), (10, 20), (20, 10)])
|
|
@@ -418,3 +418,13 @@ def test_save_constructor_reduce2(shape, disk, compute):
|
|
|
418
418
|
blosc2.remove_urlpath(urlpath_a)
|
|
419
419
|
blosc2.remove_urlpath(urlpath_b)
|
|
420
420
|
blosc2.remove_urlpath("out.b2nd")
|
|
421
|
+
|
|
422
|
+
|
|
423
|
+
def test_reduction_index():
|
|
424
|
+
shape = (20, 20)
|
|
425
|
+
a = blosc2.linspace(0, 20, num=np.prod(shape), shape=shape)
|
|
426
|
+
arr = blosc2.lazyexpr("sum(a,axis=0)", {"a": a})
|
|
427
|
+
newarr = arr.compute()
|
|
428
|
+
assert arr[:10].shape == (10,)
|
|
429
|
+
assert arr[0].shape == (1,)
|
|
430
|
+
assert arr.shape == newarr.shape
|
|
@@ -135,3 +135,40 @@ def test_large_typesize(shape, typesize, asarray):
|
|
|
135
135
|
else:
|
|
136
136
|
b = blosc2.zeros(shape, dtype=dtype)
|
|
137
137
|
assert np.array_equal(b[0], a[0])
|
|
138
|
+
|
|
139
|
+
|
|
140
|
+
@pytest.mark.parametrize(
|
|
141
|
+
"dtype",
|
|
142
|
+
[
|
|
143
|
+
np.dtype(("<f8", (10,))),
|
|
144
|
+
np.dtype(("<i8", (10,))),
|
|
145
|
+
np.dtype(("<i4,>f4", (10,))),
|
|
146
|
+
],
|
|
147
|
+
)
|
|
148
|
+
def test_nd_dtype(dtype):
|
|
149
|
+
# Test that the dtype is correctly set for a 1D array with a nested dtype
|
|
150
|
+
a = blosc2.zeros((1,), dtype=dtype)
|
|
151
|
+
assert a.dtype == dtype
|
|
152
|
+
b = np.zeros((1,), dtype=dtype)
|
|
153
|
+
if dtype.base.fields: # ("<i8,>f4", (10,))
|
|
154
|
+
# Check values by converting to a dtype without a structure
|
|
155
|
+
a2 = a[:].view(dtype=np.int8)
|
|
156
|
+
b2 = b[:].view(dtype=np.int8)
|
|
157
|
+
np.testing.assert_equal(a2, b2)
|
|
158
|
+
else:
|
|
159
|
+
np.testing.assert_equal(a[:], b)
|
|
160
|
+
|
|
161
|
+
|
|
162
|
+
def test_shape_empty():
|
|
163
|
+
# Test that the shape is correctly set to () for an empty array
|
|
164
|
+
a = blosc2.zeros((), dtype=np.int32)
|
|
165
|
+
assert a.shape == ()
|
|
166
|
+
assert a.dtype == np.int32
|
|
167
|
+
b = np.zeros((), dtype=np.int32)
|
|
168
|
+
np.testing.assert_equal(a[()], b)
|
|
169
|
+
|
|
170
|
+
|
|
171
|
+
def test_shape_max_dims():
|
|
172
|
+
# Test that the shape cannot exceed the maximum number of dimensions
|
|
173
|
+
with pytest.raises(ValueError):
|
|
174
|
+
a = blosc2.zeros((1,) * (blosc2.MAX_DIM + 1), dtype=np.int32)
|
|
@@ -1 +0,0 @@
|
|
|
1
|
-
__version__ = "3.3.2"
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|