blosc2 3.2.0__tar.gz → 3.3.0__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {blosc2-3.2.0 → blosc2-3.3.0}/.pre-commit-config.yaml +1 -1
- {blosc2-3.2.0 → blosc2-3.3.0}/ANNOUNCE.rst +6 -8
- {blosc2-3.2.0 → blosc2-3.3.0}/CMakeLists.txt +1 -1
- {blosc2-3.2.0 → blosc2-3.3.0}/PKG-INFO +26 -36
- {blosc2-3.2.0 → blosc2-3.3.0}/README.rst +19 -28
- {blosc2-3.2.0 → blosc2-3.3.0}/RELEASE_NOTES.md +35 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/RELEASING.rst +6 -2
- blosc2-3.3.0/doc/getting_started/overview.rst +238 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/getting_started/tutorials/05.persistent-reductions.ipynb +9 -9
- blosc2-3.3.0/doc/getting_started/tutorials/images/reductions/3D-cube-plane.png +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/python-blosc2.rst +1 -1
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/linear_algebra.rst +1 -0
- blosc2-3.3.0/examples/ndarray/jit-numpy-funcs.py +59 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/pyproject.toml +4 -1
- {blosc2-3.2.0 → blosc2-3.3.0}/src/blosc2/__init__.py +1 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/src/blosc2/blosc2_ext.pyx +65 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/src/blosc2/core.py +26 -2
- {blosc2-3.2.0 → blosc2-3.3.0}/src/blosc2/lazyexpr.py +47 -2
- {blosc2-3.2.0 → blosc2-3.3.0}/src/blosc2/ndarray.py +180 -12
- blosc2-3.3.0/src/blosc2/version.py +1 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/tests/ndarray/test_evaluate.py +15 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/tests/ndarray/test_full.py +3 -1
- {blosc2-3.2.0 → blosc2-3.3.0}/tests/ndarray/test_lazyexpr.py +17 -2
- {blosc2-3.2.0 → blosc2-3.3.0}/tests/ndarray/test_matmul.py +44 -3
- {blosc2-3.2.0 → blosc2-3.3.0}/tests/ndarray/test_nans.py +1 -1
- blosc2-3.3.0/tests/ndarray/test_slice.py +93 -0
- blosc2-3.3.0/tests/ndarray/test_transpose.py +104 -0
- blosc2-3.2.0/.github/ISSUE_TEMPLATE/bug_report.md +0 -26
- blosc2-3.2.0/.github/dependabot.yml +0 -7
- blosc2-3.2.0/.github/workflows/build.yml +0 -29
- blosc2-3.2.0/.github/workflows/cibuildwheels.yml +0 -141
- blosc2-3.2.0/.github/workflows/wasm.yml +0 -64
- blosc2-3.2.0/bench/compress_numpy.py +0 -69
- blosc2-3.2.0/bench/encode-itrunc-Linux-i13900K.ipynb +0 -528
- blosc2-3.2.0/bench/encode-itrunc-MacOS-M1.ipynb +0 -528
- blosc2-3.2.0/bench/encode-sparse-MacOS-Intel.ipynb +0 -417
- blosc2-3.2.0/bench/fill_special.py +0 -53
- blosc2-3.2.0/bench/get_slice.py +0 -54
- blosc2-3.2.0/bench/io.py +0 -148
- blosc2-3.2.0/bench/ndarray/broadcast_expr.py +0 -44
- blosc2-3.2.0/bench/ndarray/compare_getslice.py +0 -244
- blosc2-3.2.0/bench/ndarray/compute_expr_numba.py +0 -147
- blosc2-3.2.0/bench/ndarray/compute_expr_udf.ipynb +0 -361
- blosc2-3.2.0/bench/ndarray/compute_fields.py +0 -67
- blosc2-3.2.0/bench/ndarray/compute_where.py +0 -95
- blosc2-3.2.0/bench/ndarray/copy_postfilter.py +0 -57
- blosc2-3.2.0/bench/ndarray/download_data.py +0 -40
- blosc2-3.2.0/bench/ndarray/era5-pds/measurements-i10k.parquet +0 -0
- blosc2-3.2.0/bench/ndarray/era5-pds/measurements-i13k-always-split.parquet +0 -0
- blosc2-3.2.0/bench/ndarray/era5-pds/measurements-i13k-never-split.parquet +0 -0
- blosc2-3.2.0/bench/ndarray/era5-pds/measurements-i13k.parquet +0 -0
- blosc2-3.2.0/bench/ndarray/era5-pds/measurements-m1.parquet +0 -0
- blosc2-3.2.0/bench/ndarray/era5-pds/measurements-ryzen3.parquet +0 -0
- blosc2-3.2.0/bench/ndarray/jit-expr.py +0 -154
- blosc2-3.2.0/bench/ndarray/jit-reduc-float64-lossy-plot.py +0 -179
- blosc2-3.2.0/bench/ndarray/jit-reduc-float64-plot-dask.py +0 -181
- blosc2-3.2.0/bench/ndarray/jit-reduc-float64-plot-semilogx.py +0 -272
- blosc2-3.2.0/bench/ndarray/jit-reduc-float64-plot.py +0 -294
- blosc2-3.2.0/bench/ndarray/jit-reduc-sizes-dask.py +0 -204
- blosc2-3.2.0/bench/ndarray/jit-reduc-sizes.py +0 -145
- blosc2-3.2.0/bench/ndarray/jit-reduc.py +0 -144
- blosc2-3.2.0/bench/ndarray/lazyarray-constructors.py +0 -67
- blosc2-3.2.0/bench/ndarray/lazyarray-dask-large.ipynb +0 -8831
- blosc2-3.2.0/bench/ndarray/lazyarray-dask-small.ipynb +0 -3179
- blosc2-3.2.0/bench/ndarray/lazyarray-expr-large.ipynb +0 -7023
- blosc2-3.2.0/bench/ndarray/lazyarray-expr.ipynb +0 -2992
- blosc2-3.2.0/bench/ndarray/matmul.ipynb +0 -4941
- blosc2-3.2.0/bench/ndarray/plot_transcode_data.ipynb +0 -349
- blosc2-3.2.0/bench/ndarray/reduce_expr.py +0 -75
- blosc2-3.2.0/bench/ndarray/run-jit-reduc-sizes.sh +0 -5
- blosc2-3.2.0/bench/ndarray/transcode_data.py +0 -156
- blosc2-3.2.0/bench/pack_compress.py +0 -159
- blosc2-3.2.0/bench/pack_large.py +0 -58
- blosc2-3.2.0/bench/pack_tensor.py +0 -170
- blosc2-3.2.0/bench/set_slice.py +0 -57
- blosc2-3.2.0/bench/sum_postfilter.py +0 -57
- blosc2-3.2.0/doc/getting_started/overview.rst +0 -299
- blosc2-3.2.0/doc/getting_started/tutorials/images/reductions/3D-cube-plane.png +0 -0
- blosc2-3.2.0/src/blosc2/version.py +0 -1
- blosc2-3.2.0/tests/ndarray/test_slice.py +0 -56
- {blosc2-3.2.0 → blosc2-3.3.0}/.gitignore +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/.guix/modules/python-blosc2-package.scm +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/.guix-channel +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/CONTRIBUTING.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/LICENSE.txt +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/README_DEVELOPERS.md +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/code_of_conduct.md +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/_static/blosc-favicon_32x32.png +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/_static/blosc-favicon_64x64.png +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/_static/blosc-logo_128.png +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/_static/blosc-logo_256.png +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/_static/css/custom.css +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/conf.py +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/development/code-of-conduct.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/development/contributing.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/development/index.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/getting_started/index.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/getting_started/installation.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/getting_started/tutorials/01.ndarray-basics.ipynb +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/getting_started/tutorials/02.lazyarray-expressions.ipynb +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/getting_started/tutorials/03.lazyarray-udf.ipynb +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/getting_started/tutorials/04.reductions.ipynb +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/getting_started/tutorials/06.remote_proxy.ipynb +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/getting_started/tutorials/07.schunk-basics.ipynb +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/getting_started/tutorials/08.schunk-slicing_and_beyond.ipynb +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/getting_started/tutorials/10.ucodecs-ufilters.ipynb +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/getting_started/tutorials/11.prefilters.ipynb +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/getting_started/tutorials/12.postfilters.ipynb +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/getting_started/tutorials/images/blosc2-pipeline.png +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/getting_started/tutorials/images/blosc2-pipeline.svg +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/getting_started/tutorials/images/lazyexpr-broadcast.png +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/getting_started/tutorials/images/reductions/3D-cube.png +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/getting_started/tutorials/images/reductions/memory-access-2D-x.png +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/getting_started/tutorials/images/reductions/memory-access-2D-y.png +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/getting_started/tutorials/images/remote_proxy.png +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/getting_started/tutorials/images/ucodecs-filters/backward.png +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/getting_started/tutorials/images/ucodecs-filters/backward.svg +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/getting_started/tutorials/images/ucodecs-filters/decoder.png +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/getting_started/tutorials/images/ucodecs-filters/decoder.svg +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/getting_started/tutorials/images/ucodecs-filters/decoder2.png +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/getting_started/tutorials/images/ucodecs-filters/decoder2.svg +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/getting_started/tutorials/images/ucodecs-filters/encoder.png +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/getting_started/tutorials/images/ucodecs-filters/encoder.svg +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/getting_started/tutorials/images/ucodecs-filters/encoder2.png +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/getting_started/tutorials/images/ucodecs-filters/encoder2.svg +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/getting_started/tutorials/images/ucodecs-filters/forward.png +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/getting_started/tutorials/images/ucodecs-filters/forward.svg +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/getting_started/tutorials.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/index.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/array_operations.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.__getitem__.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.__init__.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.__len__.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.__setitem__.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.append_data.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.decompress_chunk.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.delete_chunk.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.fill_special.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.filler.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.get_chunk.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.get_slice.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.insert_chunk.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.insert_data.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.iterchunks.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.iterchunks_info.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.postfilter.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.prefilter.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.remove_postfilter.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.remove_prefilter.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.to_cframe.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.update_chunk.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/autofiles/schunk/blosc2.schunk.SChunk.update_data.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/c2array.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/classes.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/decorators.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/index.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/lazy_functions.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/lazyarray.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/low_level.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/ndarray.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/ndfield.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/proxy.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/proxyndsource.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/proxysource.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/reduction_functions.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/save_load.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/schunk.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/storage.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/reference/utilities.rst +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/doc/release_notes/index.md +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/examples/btune.py +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/examples/compress2_decompress2.py +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/examples/compress_decompress.py +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/examples/filler.py +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/examples/gil.py +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/examples/mmap-rw.py +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/examples/ndarray/arange-constructor.py +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/examples/ndarray/asarray_.py +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/examples/ndarray/broadcast_expr.py +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/examples/ndarray/buffer.py +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/examples/ndarray/bytedelta_filter.py +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/examples/ndarray/c2array_expr.py +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/examples/ndarray/compute_expr.py +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/examples/ndarray/compute_fields.py +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/examples/ndarray/compute_udf_numba.py +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/examples/ndarray/compute_where.py +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/examples/ndarray/copy_.py +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/examples/ndarray/empty_.py +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/examples/ndarray/eye-constructor.py +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/examples/ndarray/filter_sort_fields.py +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/examples/ndarray/formats.py +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/examples/ndarray/fromiter-constructor.py +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/examples/ndarray/general_expressions.py +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/examples/ndarray/getitem.py +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/examples/ndarray/iterchunks_info.py +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/examples/ndarray/jit-expr.py +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/examples/ndarray/jit-reduc.py +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/examples/ndarray/linspace-constructor.py +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/examples/ndarray/lists-vs-bools-idx.py +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/examples/ndarray/meta.py +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/examples/ndarray/ndarray_copy.py +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/examples/ndarray/ndmean.py +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/examples/ndarray/persistency.py +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/examples/ndarray/proxy-carray.py +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/examples/ndarray/proxy-ndarray.py +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/examples/ndarray/reduce_and_enlarge.py +0 -0
- {blosc2-3.2.0 → blosc2-3.3.0}/examples/ndarray/reduce_expr.py +0 -0
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- {blosc2-3.2.0 → blosc2-3.3.0}/examples/ndarray/reduce_string_expr.py +0 -0
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-------------------------------
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<https://www.youtube.com/watch?v=LvP9zxMGBng>`_:
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:target: https://www.youtube.com/watch?v=LvP9zxMGBng
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Operating with NDArrays
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=======================
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Python-Blosc2's ``NDArray`` objects are designed for ease of use,
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demonstrated by this example:
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.. code-block:: python
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import blosc2
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N = 20_000
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# N = 70_000 # for large scenario
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a = blosc2.linspace(0, 1, N * N).reshape(N, N)
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b = blosc2.linspace(1, 2, N * N).reshape(N, N)
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c = blosc2.linspace(-10, 10, N * N).reshape(N, N)
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expr = ((a**3 + blosc2.sin(c * 2)) < b) & (c > 0)
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out = expr.compute()
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print(out.info)
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``NDArray`` instances resemble NumPy arrays but store compressed data,
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processed efficiently by Python-Blosc2's engine.
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When operands fit in memory (20,000 x 20,000), performance nears
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top-tier libraries like NumExpr, exceeding NumPy and Numba, with low memory use
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via default compression. As you can see, Blosc2 compression can speed
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computation via fast codecs and filters, plus efficient CPU cache use.
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.. image:: https://github.com/Blosc/python-blosc2/blob/main/images/lazyarray-dask-small.png?raw=true
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:width: 100%
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:alt: Performance when operands comfortably fit in-memory
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For larger datasets exceeding memory, Python-Blosc2 rivals Dask+Zarr in
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performance (70,000 x 70,000).
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.. image:: https://github.com/Blosc/python-blosc2/blob/main/images/lazyarray-dask-large.png?raw=true
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:width: 100%
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:alt: Performance when operands do not fit in memory (uncompressed)
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Blosc2 can utilize MKL-enabled Numexpr for optimized transcendental
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functions on Intel compatible CPUs (as used for the above plots).
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Benchmark notebooks:
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https://github.com/Blosc/python-blosc2/blob/main/bench/ndarray/lazyarray-dask-small.ipynb
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https://github.com/Blosc/python-blosc2/blob/main/bench/ndarray/lazyarray-dask-large.ipynb
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Reductions and disk-based computations
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--------------------------------------
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One key feature of Python-Blosc2's compute engine is its ability to
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perform reductions on compressed data, optionally stored on disk, enabling
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calculations on datasets too large for memory.
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Example:
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.. code-block:: python
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import blosc2
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N = 20_000 # for small scenario
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# N = 100_000 # for large scenario
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a = blosc2.linspace(0, 1, N * N, shape=(N, N), urlpath="a.b2nd", mode="w")
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b = blosc2.linspace(1, 2, N * N, shape=(N, N), urlpath="b.b2nd", mode="w")
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c = blosc2.linspace(-10, 10, N * N, shape=(N, N)) # small and in-memory
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# Expression
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expr = np.sum(((a**3 + np.sin(a * 2)) < c) & (b > 0), axis=1)
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# Evaluate and get a NDArray as result
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out = expr.compute()
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print(out.info)
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This example computes the sum of a boolean array resulting from an
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expression, where the operands are on disk, with the result being a
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1D array stored in memory (or optionally on disk via the ``out=``
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parameter in ``compute()`` or ``sum()`` functions).
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Check out a blog post about this feature, with performance comparisons, at:
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https://ironarray.io/blog/compute-bigger
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Hopefully, this overview has provided a good understanding of
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Python-Blosc2's capabilities. To begin your journey with Python-Blosc2,
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proceed to the `installation instructions <installation>`_.
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Then explore the `tutorials <tutorials>`_ and
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`reference <../reference>`_ sections for further information!
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"source": [
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"## Operands as arrays of different shape\n",
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"## Creating, saving and loading a lazy expression\n",
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"First, let's build a string expression that sums the contents of array `a` and performs a multiplication with `b` and `c`. In this context, creating a string version of the expression is critical; otherwise, reductions will be computed eagerly.\n",
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"In the code above, an expression combining the arrays `a`, `b`, and `c` is expressed in string form: `a.sum() + b ∗ c`. Then, one builds a lazy expression and
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"In the code above, an expression combining the arrays `a`, `b`, and `c` is expressed in string form: `a.sum() + b ∗ c`. Then, one builds a lazy expression and saves it for later. The chosen expression illustrates how operations automatically adapt to the dimensions of the operands via broadcasting.\n",
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"**Broadcasting** allows arrays of different shapes (dimensions) to align for mathematical operations, such as addition or multiplication, without the need to enlarge operands by replicating data. The main idea is that smaller dimensions are \"stretched\" to larger dimensions in such a way that
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"**Broadcasting** allows arrays of different shapes (dimensions) to align for mathematical operations, such as addition or multiplication, without the need to enlarge operands by replicating data. The main idea is that smaller dimensions are \"stretched\" to larger dimensions in such a way that the operation may be performed consistently.\n",
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"See [NumPy docs on broadcasting](https://numpy.org/doc/stable/user/basics.broadcasting.html) for more information.\n",
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"See the [NumPy docs on broadcasting](https://numpy.org/doc/stable/user/basics.broadcasting.html) for more information.\n",
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"\n",
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"Now that we have saved the expression, we can open and compute it to obtain the result. Let's see how this is done."
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"As we can observe when printing the lazy expression and its shape, the time required to get the `shape` is significantly shorter. This is because `lazy_expression.shape` does not need to compute all the elements of the expression; instead, it only accesses the **metadata** of the operands, from which it
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"As we can observe when printing the lazy expression and its shape, the time required to get the `shape` is significantly shorter. This is because `lazy_expression.shape` does not need to compute all the elements of the expression; instead, it only accesses the **metadata** of the operands, from which it infers the necessary information about the dimensions and type of the result.\n",
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"Thanks to this metadata, if we know the dimensions of the arrays involved in the operation (such as in the case of `a.sum() + b * c`), Blosc2 can **quickly infer the resulting shape** without performing intensive calculations. This allows for fast access to structural information (like the `shape` and `dtype`) without operating on the actual data.\n",
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"## Resizing operands of persisted lazy expressions\n",
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"In this section, we will see how persisted lazy expressions automatically adapt to changes in the dimensions and values of the original operands, such as arrays `a` and `b`."
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"In this section, we will see how persisted lazy expressions automatically adapt to changes in the dimensions and values of the original operands, such as the arrays `a` and `b`."
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"After increasing the dimensions of the original arrays by modifying the values of `a` and `b`, the lazy expression is reopened. This step is crucial as it allows us to observe how the computation of the expression adapts to the new dimensions. Upon re-opening the expression, we can check that the results now accurately reflect these changes in the dimensions of the array operands. Moreover, see how obtaining the structural information (the `shape`) of the expression is a quick process, requiring only a fraction of the time it takes for the complete computation.\n",
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"After increasing the dimensions of the original arrays by modifying the values of `a` and `b`, the lazy expression is reopened. This step is crucial as it allows us to observe how the computation of the expression adapts to the new dimensions. Upon re-opening the expression, we can check that the results now accurately reflect these changes in the dimensions of the array operands. Moreover, see how obtaining the updated structural information (the `shape`) of the expression is a quick process, requiring only a fraction of the time it takes for the complete computation.\n",
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"This behavior highlights the ability of lazy expressions to adjust to operands using **metadata**, eliminating the need to re-compute each operation from the beginning. Thanks to this approach, notable flexibility and efficiency are achieved in handling arrays of various shapes and sizes."
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"Also, broadcasting support facilitates working with arrays of different sizes, making the process more powerful and intuitive.\n",
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"Understanding how operations are managed in this context enables developers and data scientists to make the most of reduction and broadcasting capabilities, thereby enhancing the efficiency and effectiveness of their analyses and calculations. The beauty of lazy expressions lies in
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"Understanding how operations are managed in this context enables developers and data scientists to make the most of reduction and broadcasting capabilities, thereby enhancing the efficiency and effectiveness of their analyses and calculations. The beauty of lazy expressions lies in their ability to simplify the complex and empower our creativity!"
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<p style="text-align: center; color: black; background-color: rgba(230, 169, 9, 0.65);">
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<a href="https://github.com/Blosc/python-blosc2/blob/main/RELEASE_NOTES.md"
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style="font-size: 1.5em;">Version 3.1
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style="font-size: 1.5em;">Version 3.2.1 released on 2025-04-27!</a>
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<span style="display: inline-block; width: 20px;"></span>
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<span style="font-family: monospace;">pip install blosc2 -U</span>
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</p>
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