bioversions 0.8.87__tar.gz → 0.8.89__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {bioversions-0.8.87 → bioversions-0.8.89}/PKG-INFO +1 -1
- {bioversions-0.8.87 → bioversions-0.8.89}/pyproject.toml +2 -2
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/resources/versions.json +64 -2
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/version.py +1 -1
- {bioversions-0.8.87 → bioversions-0.8.89}/LICENSE +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/README.md +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/__init__.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/__main__.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/charts.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/cli.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/py.typed +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/resources/__init__.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/resources/update.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/slack_client.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/__init__.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/antibodyregistry.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/bigg.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/biogrid.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/cellosaurus.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/chebi.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/chembl.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/chemidplus.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/civic.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/complexportal.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/daily.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/depmap.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/dgi.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/disgenet.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/drugbank.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/drugcentral.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/ensembl.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/expasy.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/flybase.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/gtdb.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/guidetopharmacology.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/hgnc.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/homologene.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/icd10.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/icd11.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/icf.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/intact.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/interpro.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/itis.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/kegg.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/mesh.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/mgi.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/mirbase.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/moalmanac.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/msigdb.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/ncit.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/npass.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/obo.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/ols.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/omim.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/oncotree.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/pathbank.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/pathwaycommons.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/pfam.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/pombase.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/pr.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/pubchem.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/reactome.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/rfam.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/rgd.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/rhea.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/rxnorm.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/sgd.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/signor.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/silva.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/slm.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/spdx.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/stringdb.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/umls.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/uniprot.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/unversioned.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/wikipathways.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/sources/zfin.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/templates/base.html +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/templates/home.html +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/utils.py +0 -0
- {bioversions-0.8.87 → bioversions-0.8.89}/src/bioversions/wsgi.py +0 -0
@@ -4,7 +4,7 @@ build-backend = "uv_build"
|
|
4
4
|
|
5
5
|
[project]
|
6
6
|
name = "bioversions"
|
7
|
-
version = "0.8.
|
7
|
+
version = "0.8.89"
|
8
8
|
description = "Get the current version for biological databases"
|
9
9
|
readme = "README.md"
|
10
10
|
authors = [
|
@@ -260,7 +260,7 @@ known-first-party = [
|
|
260
260
|
docstring-code-format = true
|
261
261
|
|
262
262
|
[tool.bumpversion]
|
263
|
-
current_version = "0.8.
|
263
|
+
current_version = "0.8.89"
|
264
264
|
parse = "(?P<major>\\d+)\\.(?P<minor>\\d+)\\.(?P<patch>\\d+)(?:-(?P<release>[0-9A-Za-z-]+(?:\\.[0-9A-Za-z-]+)*))?(?:\\+(?P<build>[0-9A-Za-z-]+(?:\\.[0-9A-Za-z-]+)*))?"
|
265
265
|
serialize = [
|
266
266
|
"{major}.{minor}.{patch}-{release}+{build}",
|
@@ -1,7 +1,7 @@
|
|
1
1
|
{
|
2
2
|
"annotations": {
|
3
|
-
"revision":
|
4
|
-
"date": "2025-
|
3
|
+
"revision": 1079,
|
4
|
+
"date": "2025-08-02",
|
5
5
|
"author": "runner"
|
6
6
|
},
|
7
7
|
"database": [
|
@@ -878,6 +878,16 @@
|
|
878
878
|
"retrieved": "2025-07-31",
|
879
879
|
"version": "2025-07-30",
|
880
880
|
"homepage": "https://antibodyregistry.org/"
|
881
|
+
},
|
882
|
+
{
|
883
|
+
"retrieved": "2025-08-01",
|
884
|
+
"version": "2025-07-31",
|
885
|
+
"homepage": "https://antibodyregistry.org/"
|
886
|
+
},
|
887
|
+
{
|
888
|
+
"retrieved": "2025-08-02",
|
889
|
+
"version": "2025-08-01",
|
890
|
+
"homepage": "https://antibodyregistry.org/"
|
881
891
|
}
|
882
892
|
],
|
883
893
|
"name": "Antibody Registry",
|
@@ -2403,6 +2413,11 @@
|
|
2403
2413
|
"retrieved": "2025-07-27",
|
2404
2414
|
"version": "243",
|
2405
2415
|
"homepage": "ftp://ftp.ebi.ac.uk/pub/databases/chebi/archive/rel243/"
|
2416
|
+
},
|
2417
|
+
{
|
2418
|
+
"retrieved": "2025-08-02",
|
2419
|
+
"version": "244",
|
2420
|
+
"homepage": "ftp://ftp.ebi.ac.uk/pub/databases/chebi/archive/rel244/"
|
2406
2421
|
}
|
2407
2422
|
],
|
2408
2423
|
"vtype": "sequential"
|
@@ -2678,6 +2693,10 @@
|
|
2678
2693
|
{
|
2679
2694
|
"retrieved": "2025-07-02",
|
2680
2695
|
"version": "2025-07-01"
|
2696
|
+
},
|
2697
|
+
{
|
2698
|
+
"retrieved": "2025-08-02",
|
2699
|
+
"version": "2025-08-01"
|
2681
2700
|
}
|
2682
2701
|
],
|
2683
2702
|
"name": "CiVIC",
|
@@ -3947,6 +3966,12 @@
|
|
3947
3966
|
"version": "2025-06-27",
|
3948
3967
|
"homepage": "https://github.com/DiseaseOntology/HumanDiseaseOntology/tree/main/src/ontology/releases/2025-06-27",
|
3949
3968
|
"date": "2025-06-27"
|
3969
|
+
},
|
3970
|
+
{
|
3971
|
+
"retrieved": "2025-08-02",
|
3972
|
+
"version": "2025-08-01",
|
3973
|
+
"homepage": "https://github.com/DiseaseOntology/HumanDiseaseOntology/tree/main/src/ontology/releases/2025-08-01",
|
3974
|
+
"date": "2025-08-01"
|
3950
3975
|
}
|
3951
3976
|
],
|
3952
3977
|
"vtype": "date"
|
@@ -6894,6 +6919,11 @@
|
|
6894
6919
|
"retrieved": "2025-07-05",
|
6895
6920
|
"version": "2025-07-04",
|
6896
6921
|
"homepage": "https://storage.googleapis.com/public-download-files/hgnc/archive/archive/monthly/json/hgnc_complete_set_2025-07-04.json"
|
6922
|
+
},
|
6923
|
+
{
|
6924
|
+
"retrieved": "2025-08-02",
|
6925
|
+
"version": "2025-08-01",
|
6926
|
+
"homepage": "https://storage.googleapis.com/public-download-files/hgnc/archive/archive/monthly/json/hgnc_complete_set_2025-08-01.json"
|
6897
6927
|
}
|
6898
6928
|
],
|
6899
6929
|
"name": "HGNC",
|
@@ -8015,6 +8045,11 @@
|
|
8015
8045
|
"retrieved": "2025-07-01",
|
8016
8046
|
"version": "115.0",
|
8017
8047
|
"date": "2025-07-01"
|
8048
|
+
},
|
8049
|
+
{
|
8050
|
+
"retrieved": "2025-08-01",
|
8051
|
+
"version": "115.1",
|
8052
|
+
"date": "2025-08-01"
|
8018
8053
|
}
|
8019
8054
|
],
|
8020
8055
|
"vtype": "semver_minor"
|
@@ -11567,6 +11602,10 @@
|
|
11567
11602
|
{
|
11568
11603
|
"retrieved": "2025-07-31",
|
11569
11604
|
"version": "2025-07-29"
|
11605
|
+
},
|
11606
|
+
{
|
11607
|
+
"retrieved": "2025-08-02",
|
11608
|
+
"version": "2025-07-31"
|
11570
11609
|
}
|
11571
11610
|
],
|
11572
11611
|
"name": "Online Mendelian Inheritance in Man",
|
@@ -13520,6 +13559,12 @@
|
|
13520
13559
|
"version": "2025-07-01",
|
13521
13560
|
"homepage": "https://www.pombase.org/data/releases/pombase-2025-07-01/",
|
13522
13561
|
"date": "2025-07-01"
|
13562
|
+
},
|
13563
|
+
{
|
13564
|
+
"retrieved": "2025-08-02",
|
13565
|
+
"version": "2025-08-01",
|
13566
|
+
"homepage": "https://www.pombase.org/data/releases/pombase-2025-08-01/",
|
13567
|
+
"date": "2025-08-01"
|
13523
13568
|
}
|
13524
13569
|
],
|
13525
13570
|
"name": "PomBase",
|
@@ -13990,6 +14035,11 @@
|
|
13990
14035
|
"retrieved": "2025-07-01",
|
13991
14036
|
"version": "2025-07-01",
|
13992
14037
|
"homepage": "https://ftp.ncbi.nlm.nih.gov/pubchem/Compound/Monthly/2025-07-01"
|
14038
|
+
},
|
14039
|
+
{
|
14040
|
+
"retrieved": "2025-08-01",
|
14041
|
+
"version": "2025-08-01",
|
14042
|
+
"homepage": "https://ftp.ncbi.nlm.nih.gov/pubchem/Compound/Monthly/2025-08-01"
|
13993
14043
|
}
|
13994
14044
|
],
|
13995
14045
|
"name": "PubChem",
|
@@ -18674,6 +18724,14 @@
|
|
18674
18724
|
{
|
18675
18725
|
"retrieved": "2025-07-31",
|
18676
18726
|
"version": "2025-07-31"
|
18727
|
+
},
|
18728
|
+
{
|
18729
|
+
"retrieved": "2025-08-01",
|
18730
|
+
"version": "2025-08-01"
|
18731
|
+
},
|
18732
|
+
{
|
18733
|
+
"retrieved": "2025-08-02",
|
18734
|
+
"version": "2025-08-02"
|
18677
18735
|
}
|
18678
18736
|
],
|
18679
18737
|
"name": "SwissLipids",
|
@@ -24621,6 +24679,10 @@
|
|
24621
24679
|
{
|
24622
24680
|
"retrieved": "2025-07-31",
|
24623
24681
|
"version": "2025-07-29"
|
24682
|
+
},
|
24683
|
+
{
|
24684
|
+
"retrieved": "2025-08-01",
|
24685
|
+
"version": "2025-07-30"
|
24624
24686
|
}
|
24625
24687
|
],
|
24626
24688
|
"name": "Zebrafish Information Network",
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|