bioversions 0.8.249__tar.gz → 0.8.254__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (84) hide show
  1. {bioversions-0.8.249 → bioversions-0.8.254}/PKG-INFO +1 -1
  2. {bioversions-0.8.249 → bioversions-0.8.254}/pyproject.toml +2 -2
  3. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/resources/versions.json +133 -2
  4. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/version.py +1 -1
  5. {bioversions-0.8.249 → bioversions-0.8.254}/LICENSE +0 -0
  6. {bioversions-0.8.249 → bioversions-0.8.254}/README.md +0 -0
  7. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/__init__.py +0 -0
  8. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/__main__.py +0 -0
  9. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/charts.py +0 -0
  10. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/cli.py +0 -0
  11. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/py.typed +0 -0
  12. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/resources/__init__.py +0 -0
  13. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/resources/update.py +0 -0
  14. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/slack_client.py +0 -0
  15. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/__init__.py +0 -0
  16. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/antibodyregistry.py +0 -0
  17. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/bigg.py +0 -0
  18. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/biogrid.py +0 -0
  19. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/ccle.py +0 -0
  20. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/cellosaurus.py +0 -0
  21. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/chebi.py +0 -0
  22. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/chembl.py +0 -0
  23. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/chemidplus.py +0 -0
  24. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/civic.py +0 -0
  25. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/complexportal.py +0 -0
  26. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/daily.py +0 -0
  27. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/depmap.py +0 -0
  28. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/dgi.py +0 -0
  29. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/disgenet.py +0 -0
  30. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/drugbank.py +0 -0
  31. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/drugcentral.py +0 -0
  32. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/ensembl.py +0 -0
  33. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/expasy.py +0 -0
  34. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/flybase.py +0 -0
  35. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/gtdb.py +0 -0
  36. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/guidetopharmacology.py +0 -0
  37. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/hgnc.py +0 -0
  38. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/homologene.py +0 -0
  39. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/icd10.py +0 -0
  40. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/icd11.py +0 -0
  41. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/icf.py +0 -0
  42. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/intact.py +0 -0
  43. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/interpro.py +0 -0
  44. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/itis.py +0 -0
  45. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/kegg.py +0 -0
  46. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/loinc.py +0 -0
  47. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/mesh.py +0 -0
  48. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/mgi.py +0 -0
  49. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/mirbase.py +0 -0
  50. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/moalmanac.py +0 -0
  51. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/msigdb.py +0 -0
  52. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/ncit.py +0 -0
  53. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/npass.py +0 -0
  54. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/obo.py +0 -0
  55. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/ols.py +0 -0
  56. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/omim.py +0 -0
  57. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/oncotree.py +0 -0
  58. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/pathbank.py +0 -0
  59. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/pathwaycommons.py +0 -0
  60. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/pfam.py +0 -0
  61. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/pombase.py +0 -0
  62. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/pr.py +0 -0
  63. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/pubchem.py +0 -0
  64. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/reactome.py +0 -0
  65. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/rfam.py +0 -0
  66. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/rgd.py +0 -0
  67. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/rhea.py +0 -0
  68. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/ror.py +0 -0
  69. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/rxnorm.py +0 -0
  70. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/sgd.py +0 -0
  71. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/signor.py +0 -0
  72. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/silva.py +0 -0
  73. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/slm.py +0 -0
  74. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/spdx.py +0 -0
  75. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/stringdb.py +0 -0
  76. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/umls.py +0 -0
  77. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/uniprot.py +0 -0
  78. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/unversioned.py +0 -0
  79. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/wikipathways.py +0 -0
  80. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/sources/zfin.py +0 -0
  81. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/templates/base.html +0 -0
  82. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/templates/home.html +0 -0
  83. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/utils.py +0 -0
  84. {bioversions-0.8.249 → bioversions-0.8.254}/src/bioversions/wsgi.py +0 -0
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: bioversions
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- Version: 0.8.249
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+ Version: 0.8.254
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  Summary: Get the current version for biological databases
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  Keywords: snekpack,cookiecutter,databases,biological databases,biomedical databases
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  Author: Charles Tapley Hoyt
@@ -4,7 +4,7 @@ build-backend = "uv_build"
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  [project]
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  name = "bioversions"
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- version = "0.8.249"
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+ version = "0.8.254"
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  description = "Get the current version for biological databases"
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  readme = "README.md"
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  authors = [
@@ -263,7 +263,7 @@ known-first-party = [
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  docstring-code-format = true
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  [tool.bumpversion]
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- current_version = "0.8.249"
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+ current_version = "0.8.254"
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  parse = "(?P<major>\\d+)\\.(?P<minor>\\d+)\\.(?P<patch>\\d+)(?:-(?P<release>[0-9A-Za-z-]+(?:\\.[0-9A-Za-z-]+)*))?(?:\\+(?P<build>[0-9A-Za-z-]+(?:\\.[0-9A-Za-z-]+)*))?"
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  serialize = [
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  "{major}.{minor}.{patch}-{release}+{build}",
@@ -1,7 +1,7 @@
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  {
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  "annotations": {
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- "revision": 1234,
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- "date": "2026-01-29",
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+ "revision": 1239,
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+ "date": "2026-02-03",
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  "author": "runner"
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  },
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  "database": [
@@ -1468,6 +1468,21 @@
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  "retrieved": "2026-01-29",
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  "version": "2026-01-28",
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  "homepage": "https://antibodyregistry.org/"
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+ },
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+ {
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+ "retrieved": "2026-01-30",
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+ "version": "2026-01-29",
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+ "homepage": "https://antibodyregistry.org/"
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+ },
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+ {
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+ "retrieved": "2026-01-31",
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+ "version": "2026-01-30",
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+ "homepage": "https://antibodyregistry.org/"
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+ },
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+ {
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+ "retrieved": "2026-02-03",
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+ "version": "2026-02-02",
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+ "homepage": "https://antibodyregistry.org/"
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  }
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  ],
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  "name": "Antibody Registry",
@@ -2081,6 +2096,11 @@
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  "retrieved": "2026-01-02",
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  "version": "5.0.253",
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  "homepage": "https://downloads.thebiogrid.org/BioGRID/Release-Archive/BIOGRID-5.0.253"
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+ },
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+ {
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+ "retrieved": "2026-02-03",
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+ "version": "5.0.254",
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+ "homepage": "https://downloads.thebiogrid.org/BioGRID/Release-Archive/BIOGRID-5.0.254"
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  }
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  ],
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  "vtype": "semver"
@@ -3431,6 +3451,10 @@
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  {
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  "retrieved": "2026-01-02",
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  "version": "2026-01-01"
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+ },
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+ {
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+ "retrieved": "2026-02-02",
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+ "version": "2026-02-01"
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  }
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  ],
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  "name": "CiVIC",
@@ -4796,6 +4820,12 @@
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  "version": "2025-12-23",
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  "homepage": "https://github.com/DiseaseOntology/HumanDiseaseOntology/tree/main/src/ontology/releases/2025-12-23",
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  "date": "2025-12-23"
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+ },
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+ {
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+ "retrieved": "2026-02-03",
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+ "version": "2026-02-02",
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+ "homepage": "https://github.com/DiseaseOntology/HumanDiseaseOntology/tree/main/src/ontology/releases/2026-02-02",
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+ "date": "2026-02-02"
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  }
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  ],
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  "vtype": "date"
@@ -7437,6 +7467,12 @@
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  "version": "2025-10-10",
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  "homepage": "http://archive.geneontology.org/full/2025-10-10/",
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  "date": "2025-10-10"
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+ },
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+ {
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+ "retrieved": "2026-01-31",
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+ "version": "2026-01-23",
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+ "homepage": "http://archive.geneontology.org/full/2026-01-23/",
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+ "date": "2026-01-23"
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  }
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  ],
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  "vtype": "date"
@@ -8898,6 +8934,12 @@
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  "version": "107.0",
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  "homepage": "ftp://ftp.ebi.ac.uk/pub/databases/interpro/107.0/",
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  "date": "2025-10-16"
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+ },
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+ {
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+ "retrieved": "2026-01-30",
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+ "version": "108.0",
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+ "homepage": "ftp://ftp.ebi.ac.uk/pub/databases/interpro/108.0/",
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+ "date": "2026-01-29"
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  }
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  ],
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  "vtype": "semver_minor"
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  "retrieved": "2025-06-09",
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  "version": "2025.1",
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  "homepage": "https://data.broadinstitute.org/gsea-msigdb/msigdb/release/2025.1"
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+ },
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+ {
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+ "retrieved": "2026-02-01",
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+ "version": "2026.1",
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+ "homepage": "https://data.broadinstitute.org/gsea-msigdb/msigdb/release/2026.1"
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  }
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  ],
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  "vtype": "year_minor"
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  {
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  "retrieved": "2026-01-28",
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  "version": "2026-01-26"
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+ },
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+ {
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+ "retrieved": "2026-01-30",
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+ "version": "2026-01-28"
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+ },
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+ {
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+ "retrieved": "2026-01-31",
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+ "version": "2026-01-29"
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+ },
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+ {
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+ "retrieved": "2026-02-01",
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+ "version": "2026-01-30"
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+ },
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+ {
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+ "retrieved": "2026-02-02",
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+ "version": "2026-01-31"
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  }
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  ],
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  "name": "Online Mendelian Inheritance in Man",
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  "retrieved": "2026-01-01",
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  "version": "2026-01-01",
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  "homepage": "https://ftp.ncbi.nlm.nih.gov/pubchem/Compound/Monthly/2026-01-01"
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+ },
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+ {
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+ "retrieved": "2026-02-01",
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+ "version": "2026-02-01",
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+ "homepage": "https://ftp.ncbi.nlm.nih.gov/pubchem/Compound/Monthly/2026-02-01"
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  }
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  ],
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  "name": "PubChem",
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  {
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  "retrieved": "2026-01-27",
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  "version": "2026-01-24"
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+ },
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+ {
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+ "retrieved": "2026-02-03",
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+ "version": "2026-01-31"
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  }
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  ],
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  "name": "Rat Genome Database",
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  "retrieved": "2026-01-06",
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  "version": "2026-01-05",
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  "homepage": "https://download.nlm.nih.gov/umls/kss/rxnorm/RxNorm_full_01052026.zip"
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+ },
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+ {
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+ "retrieved": "2026-02-03",
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+ "version": "2026-02-02",
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+ "homepage": "https://download.nlm.nih.gov/umls/kss/rxnorm/RxNorm_full_02022026.zip"
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  }
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  ],
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  "name": "RxNorm",
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  {
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  "retrieved": "2026-01-23",
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  "version": "d34325e"
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+ },
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+ {
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+ "retrieved": "2026-01-30",
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+ "version": "6dae64a"
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+ },
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+ {
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+ "retrieved": "2026-01-31",
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+ "version": "297da51"
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  }
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  ],
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  "name": "Software Package Data Exchange License",
@@ -21630,6 +21715,26 @@
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  {
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  "retrieved": "2026-01-29",
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  "version": "2026-01-29"
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+ },
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+ {
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+ "retrieved": "2026-01-30",
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+ "version": "2026-01-30"
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+ },
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+ {
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+ "retrieved": "2026-01-31",
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+ "version": "2026-01-31"
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+ },
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+ {
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+ "retrieved": "2026-02-01",
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+ "version": "2026-02-01"
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+ },
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+ {
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+ "retrieved": "2026-02-02",
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+ "version": "2026-02-02"
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+ },
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+ {
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+ "retrieved": "2026-02-03",
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+ "version": "2026-02-03"
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  }
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  "name": "SwissLipids",
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  "version": "2025_04",
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  "homepage": "ftp://ftp.uniprot.org/pub/databases/uniprot/previous_releases/release-2025_04/",
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  "date": "2025-04-01"
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+ },
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+ {
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+ "retrieved": "2026-01-30",
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+ "version": "2026_01",
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+ "homepage": "ftp://ftp.uniprot.org/pub/databases/uniprot/previous_releases/release-2026_01/",
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+ "date": "2026-01-01"
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  }
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  ],
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  "vtype": "month"
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  {
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  "retrieved": "2026-01-29",
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  "version": "2026-01-27"
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+ },
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+ {
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+ "retrieved": "2026-01-30",
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+ "version": "2026-01-28"
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+ },
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+ {
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+ "retrieved": "2026-01-31",
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+ "version": "2026-01-29"
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+ },
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+ {
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+ "retrieved": "2026-02-01",
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+ "version": "2026-01-30"
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+ },
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+ {
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+ "retrieved": "2026-02-02",
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+ "version": "2026-01-31"
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+ },
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+ {
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+ "retrieved": "2026-02-03",
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+ "version": "2026-02-01"
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  }
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  ],
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  "name": "Zebrafish Information Network",
@@ -11,7 +11,7 @@ __all__ = [
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  "get_version",
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  ]
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- VERSION = "0.8.249"
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+ VERSION = "0.8.254"
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  def get_git_hash() -> str | None:
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