bioversions 0.6.27__tar.gz → 0.6.29__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (108) hide show
  1. {bioversions-0.6.27 → bioversions-0.6.29}/PKG-INFO +1 -1
  2. {bioversions-0.6.27 → bioversions-0.6.29}/docs/_data/versions.yml +17 -2
  3. {bioversions-0.6.27 → bioversions-0.6.29}/docs/img/has_release_url.svg +1 -1
  4. {bioversions-0.6.27 → bioversions-0.6.29}/docs/img/version_date_types.svg +1 -1
  5. {bioversions-0.6.27 → bioversions-0.6.29}/docs/img/version_types.svg +1 -1
  6. {bioversions-0.6.27 → bioversions-0.6.29}/docs/source/conf.py +1 -1
  7. {bioversions-0.6.27 → bioversions-0.6.29}/pyproject.toml +2 -2
  8. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/resources/versions.json +31 -2
  9. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/version.py +1 -1
  10. {bioversions-0.6.27 → bioversions-0.6.29}/.cruft.json +0 -0
  11. {bioversions-0.6.27 → bioversions-0.6.29}/.github/CODE_OF_CONDUCT.md +0 -0
  12. {bioversions-0.6.27 → bioversions-0.6.29}/.github/CONTRIBUTING.md +0 -0
  13. {bioversions-0.6.27 → bioversions-0.6.29}/.github/codecov.yml +0 -0
  14. {bioversions-0.6.27 → bioversions-0.6.29}/.github/workflows/cruft.yml +0 -0
  15. {bioversions-0.6.27 → bioversions-0.6.29}/.github/workflows/tests.yml +0 -0
  16. {bioversions-0.6.27 → bioversions-0.6.29}/.github/workflows/update.yml +0 -0
  17. {bioversions-0.6.27 → bioversions-0.6.29}/.gitignore +0 -0
  18. {bioversions-0.6.27 → bioversions-0.6.29}/.readthedocs.yml +0 -0
  19. {bioversions-0.6.27 → bioversions-0.6.29}/LICENSE +0 -0
  20. {bioversions-0.6.27 → bioversions-0.6.29}/MANIFEST.in +0 -0
  21. {bioversions-0.6.27 → bioversions-0.6.29}/README.md +0 -0
  22. {bioversions-0.6.27 → bioversions-0.6.29}/docs/_config.yml +0 -0
  23. {bioversions-0.6.27 → bioversions-0.6.29}/docs/_includes/footer.html +0 -0
  24. {bioversions-0.6.27 → bioversions-0.6.29}/docs/_includes/head.html +0 -0
  25. {bioversions-0.6.27 → bioversions-0.6.29}/docs/download.md +0 -0
  26. {bioversions-0.6.27 → bioversions-0.6.29}/docs/failures.md +0 -0
  27. {bioversions-0.6.27 → bioversions-0.6.29}/docs/index.md +0 -0
  28. {bioversions-0.6.27 → bioversions-0.6.29}/docs/source/cli.rst +0 -0
  29. {bioversions-0.6.27 → bioversions-0.6.29}/docs/source/index.rst +0 -0
  30. {bioversions-0.6.27 → bioversions-0.6.29}/docs/source/installation.rst +0 -0
  31. {bioversions-0.6.27 → bioversions-0.6.29}/docs/source/logo.png +0 -0
  32. {bioversions-0.6.27 → bioversions-0.6.29}/docs/source/usage.rst +0 -0
  33. {bioversions-0.6.27 → bioversions-0.6.29}/docs/summary.md +0 -0
  34. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/__init__.py +0 -0
  35. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/__main__.py +0 -0
  36. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/charts.py +0 -0
  37. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/cli.py +0 -0
  38. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/py.typed +0 -0
  39. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/resources/__init__.py +0 -0
  40. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/resources/update.py +0 -0
  41. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/slack_client.py +0 -0
  42. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/__init__.py +0 -0
  43. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/antibodyregistry.py +0 -0
  44. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/bigg.py +0 -0
  45. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/biogrid.py +0 -0
  46. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/cellosaurus.py +0 -0
  47. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/chebi.py +0 -0
  48. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/chembl.py +0 -0
  49. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/chemidplus.py +0 -0
  50. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/civic.py +0 -0
  51. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/complexportal.py +0 -0
  52. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/daily.py +0 -0
  53. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/depmap.py +0 -0
  54. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/dgi.py +0 -0
  55. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/disgenet.py +0 -0
  56. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/drugbank.py +0 -0
  57. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/drugcentral.py +0 -0
  58. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/ensembl.py +0 -0
  59. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/expasy.py +0 -0
  60. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/flybase.py +0 -0
  61. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/gtdb.py +0 -0
  62. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/guidetopharmacology.py +0 -0
  63. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/hgnc.py +0 -0
  64. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/homologene.py +0 -0
  65. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/icd10.py +0 -0
  66. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/icd11.py +0 -0
  67. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/icf.py +0 -0
  68. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/intact.py +0 -0
  69. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/interpro.py +0 -0
  70. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/itis.py +0 -0
  71. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/kegg.py +0 -0
  72. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/mesh.py +0 -0
  73. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/mgi.py +0 -0
  74. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/mirbase.py +0 -0
  75. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/moalmanac.py +0 -0
  76. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/msigdb.py +0 -0
  77. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/ncit.py +0 -0
  78. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/npass.py +0 -0
  79. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/obo.py +0 -0
  80. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/ols.py +0 -0
  81. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/omim.py +0 -0
  82. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/oncotree.py +0 -0
  83. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/pathbank.py +0 -0
  84. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/pathwaycommons.py +0 -0
  85. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/pfam.py +0 -0
  86. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/pombase.py +0 -0
  87. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/pr.py +0 -0
  88. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/pubchem.py +0 -0
  89. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/reactome.py +0 -0
  90. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/rfam.py +0 -0
  91. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/rgd.py +0 -0
  92. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/rhea.py +0 -0
  93. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/rxnorm.py +0 -0
  94. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/sgd.py +0 -0
  95. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/slm.py +0 -0
  96. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/stringdb.py +0 -0
  97. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/umls.py +0 -0
  98. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/uniprot.py +0 -0
  99. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/unversioned.py +0 -0
  100. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/wikipathways.py +0 -0
  101. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/sources/zfin.py +0 -0
  102. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/templates/base.html +0 -0
  103. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/templates/home.html +0 -0
  104. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/twitter_client.py +0 -0
  105. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/utils.py +0 -0
  106. {bioversions-0.6.27 → bioversions-0.6.29}/src/bioversions/wsgi.py +0 -0
  107. {bioversions-0.6.27 → bioversions-0.6.29}/tests/test_bioversions.py +0 -0
  108. {bioversions-0.6.27 → bioversions-0.6.29}/tox.ini +0 -0
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: bioversions
3
- Version: 0.6.27
3
+ Version: 0.6.29
4
4
  Summary: Get the current version for biological databases
5
5
  Project-URL: Bug Tracker, https://github.com/biopragmatics/bioversions/issues
6
6
  Project-URL: Homepage, https://github.com/biopragmatics/bioversions
@@ -1,7 +1,7 @@
1
1
  annotations:
2
2
  author: runner
3
- date: '2025-01-04'
4
- revision: 891
3
+ date: '2025-01-06'
4
+ revision: 893
5
5
  database:
6
6
  - name: A nomenclatural ontology for biological names
7
7
  prefix: nomen
@@ -2475,6 +2475,8 @@ database:
2475
2475
  version: '2024-11-28'
2476
2476
  - retrieved: '2024-12-15'
2477
2477
  version: '2024-12-05'
2478
+ - retrieved: '2025-01-05'
2479
+ version: '2024-12-31'
2478
2480
  vtype: date
2479
2481
  - name: Flora Phenotype Ontology
2480
2482
  prefix: flopo
@@ -5182,6 +5184,9 @@ database:
5182
5184
  - date: '2025-01-02'
5183
5185
  retrieved: '2025-01-04'
5184
5186
  version: January 2, 2025
5187
+ - date: '2025-01-03'
5188
+ retrieved: '2025-01-05'
5189
+ version: January 3, 2025
5185
5190
  vtype: date
5186
5191
  - name: 'OntoAvida: ontology for Avida digital evolution platform'
5187
5192
  prefix: ontoavida
@@ -8283,6 +8288,10 @@ database:
8283
8288
  version: '2025-01-03'
8284
8289
  - retrieved: '2025-01-04'
8285
8290
  version: '2025-01-04'
8291
+ - retrieved: '2025-01-05'
8292
+ version: '2025-01-05'
8293
+ - retrieved: '2025-01-06'
8294
+ version: '2025-01-06'
8286
8295
  vtype: date
8287
8296
  - name: SWO (The Software Ontology)
8288
8297
  prefix: swo
@@ -8847,6 +8856,8 @@ database:
8847
8856
  version: '2024-09-22'
8848
8857
  - retrieved: '2024-12-08'
8849
8858
  version: '2024-11-23'
8859
+ - retrieved: '2025-01-05'
8860
+ version: '2024-12-29'
8850
8861
  vtype: semver
8851
8862
  - name: Variation Ontology
8852
8863
  prefix: vario
@@ -11048,6 +11059,10 @@ database:
11048
11059
  version: '2025-01-01'
11049
11060
  - retrieved: '2025-01-04'
11050
11061
  version: '2025-01-02'
11062
+ - retrieved: '2025-01-05'
11063
+ version: '2025-01-03'
11064
+ - retrieved: '2025-01-06'
11065
+ version: '2025-01-04'
11051
11066
  vtype: date
11052
11067
  - name: Zebrafish Phenotype Ontology
11053
11068
  prefix: zp
@@ -6,7 +6,7 @@
6
6
  <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
7
7
  <cc:Work>
8
8
  <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
9
- <dc:date>2025-01-04T01:00:21.779222</dc:date>
9
+ <dc:date>2025-01-06T01:04:44.619977</dc:date>
10
10
  <dc:format>image/svg+xml</dc:format>
11
11
  <dc:creator>
12
12
  <cc:Agent>
@@ -6,7 +6,7 @@
6
6
  <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
7
7
  <cc:Work>
8
8
  <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
9
- <dc:date>2025-01-04T01:00:21.736364</dc:date>
9
+ <dc:date>2025-01-06T01:04:44.576411</dc:date>
10
10
  <dc:format>image/svg+xml</dc:format>
11
11
  <dc:creator>
12
12
  <cc:Agent>
@@ -6,7 +6,7 @@
6
6
  <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
7
7
  <cc:Work>
8
8
  <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
9
- <dc:date>2025-01-04T01:00:21.609433</dc:date>
9
+ <dc:date>2025-01-06T01:04:44.445010</dc:date>
10
10
  <dc:format>image/svg+xml</dc:format>
11
11
  <dc:creator>
12
12
  <cc:Agent>
@@ -26,7 +26,7 @@ copyright = f"{date.today().year}, Charles Tapley Hoyt"
26
26
  author = "Charles Tapley Hoyt"
27
27
 
28
28
  # The full version, including alpha/beta/rc tags.
29
- release = "0.6.27"
29
+ release = "0.6.29"
30
30
 
31
31
  # The short X.Y version.
32
32
  parsed_version = re.match(
@@ -4,7 +4,7 @@ build-backend = "hatchling.build"
4
4
 
5
5
  [project]
6
6
  name = "bioversions"
7
- version = "0.6.27"
7
+ version = "0.6.29"
8
8
  description = "Get the current version for biological databases"
9
9
  readme = "README.md"
10
10
  authors = [
@@ -222,7 +222,7 @@ known-first-party = [
222
222
  docstring-code-format = true
223
223
 
224
224
  [tool.bumpversion]
225
- current_version = "0.6.27"
225
+ current_version = "0.6.29"
226
226
  parse = "(?P<major>\\d+)\\.(?P<minor>\\d+)\\.(?P<patch>\\d+)(?:-(?P<release>[0-9A-Za-z-]+(?:\\.[0-9A-Za-z-]+)*))?(?:\\+(?P<build>[0-9A-Za-z-]+(?:\\.[0-9A-Za-z-]+)*))?"
227
227
  serialize = [
228
228
  "{major}.{minor}.{patch}-{release}+{build}",
@@ -1,7 +1,7 @@
1
1
  {
2
2
  "annotations": {
3
- "revision": 891,
4
- "date": "2025-01-04",
3
+ "revision": 893,
4
+ "date": "2025-01-06",
5
5
  "author": "runner"
6
6
  },
7
7
  "database": [
@@ -4562,6 +4562,10 @@
4562
4562
  {
4563
4563
  "retrieved": "2024-12-15",
4564
4564
  "version": "2024-12-05"
4565
+ },
4566
+ {
4567
+ "retrieved": "2025-01-05",
4568
+ "version": "2024-12-31"
4565
4569
  }
4566
4570
  ],
4567
4571
  "vtype": "date"
@@ -9350,6 +9354,11 @@
9350
9354
  "retrieved": "2025-01-04",
9351
9355
  "version": "January 2, 2025",
9352
9356
  "date": "2025-01-02"
9357
+ },
9358
+ {
9359
+ "retrieved": "2025-01-05",
9360
+ "version": "January 3, 2025",
9361
+ "date": "2025-01-03"
9353
9362
  }
9354
9363
  ],
9355
9364
  "name": "Online Mendelian Inheritance in Man",
@@ -15216,6 +15225,14 @@
15216
15225
  {
15217
15226
  "retrieved": "2025-01-04",
15218
15227
  "version": "2025-01-04"
15228
+ },
15229
+ {
15230
+ "retrieved": "2025-01-05",
15231
+ "version": "2025-01-05"
15232
+ },
15233
+ {
15234
+ "retrieved": "2025-01-06",
15235
+ "version": "2025-01-06"
15219
15236
  }
15220
15237
  ],
15221
15238
  "name": "SwissLipids",
@@ -16270,6 +16287,10 @@
16270
16287
  {
16271
16288
  "retrieved": "2024-12-08",
16272
16289
  "version": "2024-11-23"
16290
+ },
16291
+ {
16292
+ "retrieved": "2025-01-05",
16293
+ "version": "2024-12-29"
16273
16294
  }
16274
16295
  ],
16275
16296
  "vtype": "semver"
@@ -20292,6 +20313,14 @@
20292
20313
  {
20293
20314
  "retrieved": "2025-01-04",
20294
20315
  "version": "2025-01-02"
20316
+ },
20317
+ {
20318
+ "retrieved": "2025-01-05",
20319
+ "version": "2025-01-03"
20320
+ },
20321
+ {
20322
+ "retrieved": "2025-01-06",
20323
+ "version": "2025-01-04"
20295
20324
  }
20296
20325
  ],
20297
20326
  "name": "Zebrafish Information Network",
@@ -7,7 +7,7 @@ __all__ = [
7
7
  "VERSION",
8
8
  ]
9
9
 
10
- VERSION = "0.6.27"
10
+ VERSION = "0.6.29"
11
11
 
12
12
 
13
13
  def get_git_hash() -> str:
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes