bioversions 0.6.23__tar.gz → 0.6.25__tar.gz

{bioversions-0.6.23 → bioversions-0.6.25}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: bioversions
-Version: 0.6.23
+Version: 0.6.25
 Summary: Get the current version for biological databases
 Project-URL: Bug Tracker, https://github.com/biopragmatics/bioversions/issues
 Project-URL: Homepage, https://github.com/biopragmatics/bioversions

{bioversions-0.6.23 → bioversions-0.6.25}/docs/_data/versions.yml

@@ -1,7 +1,7 @@
 annotations:
   author: runner
-  date: '2024-12-31'
-  revision: 887
+  date: '2025-01-02'
+  revision: 889
 database:
 - name: A nomenclatural ontology for biological names
   prefix: nomen
@@ -381,6 +381,9 @@ database:
   - homepage: https://downloads.thebiogrid.org/BioGRID/Release-Archive/BIOGRID-4.4.240
     retrieved: '2024-12-03'
     version: 4.4.240
+  - homepage: https://downloads.thebiogrid.org/BioGRID/Release-Archive/BIOGRID-4.4.241
+    retrieved: '2025-01-02'
+    version: 4.4.241
   vtype: semver
 - name: Bioinformatics operations, data types, formats, identifiers and topics
   prefix: edam
@@ -866,6 +869,9 @@ database:
   - homepage: ftp://ftp.ebi.ac.uk/pub/databases/chebi/archive/rel238/
     retrieved: '2024-12-03'
     version: '238'
+  - homepage: ftp://ftp.ebi.ac.uk/pub/databases/chebi/archive/rel239/
+    retrieved: '2025-01-02'
+    version: '239'
   vtype: sequential
 - name: ChEBI Integrated Role Ontology
   prefix: chiro
@@ -1003,6 +1009,8 @@ database:
     version: 01-Nov-2024
   - retrieved: '2024-12-03'
     version: 01-Dec-2024
+  - retrieved: '2025-01-02'
+    version: 01-Jan-2025
   vtype: date
 - name: clinical LABoratory Ontology
   prefix: labo
@@ -5165,6 +5173,9 @@ database:
   - date: '2024-12-23'
     retrieved: '2024-12-25'
     version: December 23, 2024
+  - date: '2024-12-30'
+    retrieved: '2025-01-01'
+    version: December 30, 2024
   vtype: date
 - name: 'OntoAvida: ontology for Avida digital evolution platform'
   prefix: ontoavida
@@ -6157,6 +6168,10 @@ database:
     homepage: https://www.pombase.org/data/releases/pombase-2024-12-01/
     retrieved: '2024-12-03'
     version: '2024-12-01'
+  - date: '2025-01-01'
+    homepage: https://www.pombase.org/data/releases/pombase-2025-01-01/
+    retrieved: '2025-01-02'
+    version: '2025-01-01'
   vtype: date
 - name: Population and Community Ontology
   prefix: pco
@@ -6386,6 +6401,9 @@ database:
   - homepage: https://ftp.ncbi.nlm.nih.gov/pubchem/Compound/Monthly/2024-12-01
     retrieved: '2024-12-03'
     version: '2024-12-01'
+  - homepage: https://ftp.ncbi.nlm.nih.gov/pubchem/Compound/Monthly/2025-01-01
+    retrieved: '2025-01-01'
+    version: '2025-01-01'
   vtype: date
 - name: Radiation Biology Ontology
   prefix: rbo
@@ -8251,6 +8269,10 @@ database:
     version: '2024-12-30'
   - retrieved: '2024-12-31'
     version: '2024-12-31'
+  - retrieved: '2025-01-01'
+    version: '2025-01-01'
+  - retrieved: '2025-01-02'
+    version: '2025-01-02'
   vtype: date
 - name: SWO (The Software Ontology)
   prefix: swo
@@ -11008,6 +11030,10 @@ database:
     version: '2024-12-27'
   - retrieved: '2024-12-30'
     version: '2024-12-28'
+  - retrieved: '2025-01-01'
+    version: '2024-12-30'
+  - retrieved: '2025-01-02'
+    version: '2024-12-31'
   vtype: date
 - name: Zebrafish Phenotype Ontology
   prefix: zp

{bioversions-0.6.23 → bioversions-0.6.25}/docs/img/has_release_url.svg

@@ -6,7 +6,7 @@
   <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
    <cc:Work>
     <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
-    <dc:date>2024-12-31T01:01:17.990016</dc:date>
+    <dc:date>2025-01-02T01:00:58.617048</dc:date>
     <dc:format>image/svg+xml</dc:format>
     <dc:creator>
      <cc:Agent>

{bioversions-0.6.23 → bioversions-0.6.25}/docs/img/version_date_types.svg

@@ -6,7 +6,7 @@
   <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
    <cc:Work>
     <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
-    <dc:date>2024-12-31T01:01:17.946044</dc:date>
+    <dc:date>2025-01-02T01:00:58.571606</dc:date>
     <dc:format>image/svg+xml</dc:format>
     <dc:creator>
      <cc:Agent>

{bioversions-0.6.23 → bioversions-0.6.25}/docs/img/version_types.svg

@@ -6,7 +6,7 @@
   <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
    <cc:Work>
     <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
-    <dc:date>2024-12-31T01:01:17.813223</dc:date>
+    <dc:date>2025-01-02T01:00:58.423310</dc:date>
     <dc:format>image/svg+xml</dc:format>
     <dc:creator>
      <cc:Agent>

{bioversions-0.6.23 → bioversions-0.6.25}/docs/source/conf.py

@@ -26,7 +26,7 @@ copyright = f"{date.today().year}, Charles Tapley Hoyt"
 author = "Charles Tapley Hoyt"
 
 # The full version, including alpha/beta/rc tags.
-release = "0.6.23"
+release = "0.6.25"
 
 # The short X.Y version.
 parsed_version = re.match(

{bioversions-0.6.23 → bioversions-0.6.25}/pyproject.toml

@@ -4,7 +4,7 @@ build-backend = "hatchling.build"
 
 [project]
 name = "bioversions"
-version = "0.6.23"
+version = "0.6.25"
 description = "Get the current version for biological databases"
 readme = "README.md"
 authors = [
@@ -222,7 +222,7 @@ known-first-party = [
 docstring-code-format = true
 
 [tool.bumpversion]
-current_version = "0.6.23"
+current_version = "0.6.25"
 parse = "(?P<major>\\d+)\\.(?P<minor>\\d+)\\.(?P<patch>\\d+)(?:-(?P<release>[0-9A-Za-z-]+(?:\\.[0-9A-Za-z-]+)*))?(?:\\+(?P<build>[0-9A-Za-z-]+(?:\\.[0-9A-Za-z-]+)*))?"
 serialize = [
     "{major}.{minor}.{patch}-{release}+{build}",

{bioversions-0.6.23 → bioversions-0.6.25}/src/bioversions/resources/versions.json

@@ -1,7 +1,7 @@
 {
   "annotations": {
-    "revision": 887,
-    "date": "2024-12-31",
+    "revision": 889,
+    "date": "2025-01-02",
     "author": "runner"
   },
   "database": [
@@ -694,6 +694,11 @@
           "retrieved": "2024-12-03",
           "version": "4.4.240",
           "homepage": "https://downloads.thebiogrid.org/BioGRID/Release-Archive/BIOGRID-4.4.240"
+        },
+        {
+          "retrieved": "2025-01-02",
+          "version": "4.4.241",
+          "homepage": "https://downloads.thebiogrid.org/BioGRID/Release-Archive/BIOGRID-4.4.241"
         }
       ],
       "vtype": "semver"
@@ -1596,6 +1601,11 @@
           "retrieved": "2024-12-03",
           "version": "238",
           "homepage": "ftp://ftp.ebi.ac.uk/pub/databases/chebi/archive/rel238/"
+        },
+        {
+          "retrieved": "2025-01-02",
+          "version": "239",
+          "homepage": "ftp://ftp.ebi.ac.uk/pub/databases/chebi/archive/rel239/"
         }
       ],
       "vtype": "sequential"
@@ -1835,6 +1845,10 @@
         {
           "retrieved": "2024-12-03",
           "version": "01-Dec-2024"
+        },
+        {
+          "retrieved": "2025-01-02",
+          "version": "01-Jan-2025"
         }
       ],
       "name": "CiVIC",
@@ -9321,6 +9335,11 @@
           "retrieved": "2024-12-25",
           "version": "December 23, 2024",
           "date": "2024-12-23"
+        },
+        {
+          "retrieved": "2025-01-01",
+          "version": "December 30, 2024",
+          "date": "2024-12-30"
         }
       ],
       "name": "Online Mendelian Inheritance in Man",
@@ -11119,6 +11138,12 @@
           "version": "2024-12-01",
           "homepage": "https://www.pombase.org/data/releases/pombase-2024-12-01/",
           "date": "2024-12-01"
+        },
+        {
+          "retrieved": "2025-01-02",
+          "version": "2025-01-01",
+          "homepage": "https://www.pombase.org/data/releases/pombase-2025-01-01/",
+          "date": "2025-01-01"
         }
       ],
       "name": "PomBase",
@@ -11526,6 +11551,11 @@
           "retrieved": "2024-12-03",
           "version": "2024-12-01",
           "homepage": "https://ftp.ncbi.nlm.nih.gov/pubchem/Compound/Monthly/2024-12-01"
+        },
+        {
+          "retrieved": "2025-01-01",
+          "version": "2025-01-01",
+          "homepage": "https://ftp.ncbi.nlm.nih.gov/pubchem/Compound/Monthly/2025-01-01"
         }
       ],
       "name": "PubChem",
@@ -15160,6 +15190,14 @@
         {
           "retrieved": "2024-12-31",
           "version": "2024-12-31"
+        },
+        {
+          "retrieved": "2025-01-01",
+          "version": "2025-01-01"
+        },
+        {
+          "retrieved": "2025-01-02",
+          "version": "2025-01-02"
         }
       ],
       "name": "SwissLipids",
@@ -20220,6 +20258,14 @@
         {
           "retrieved": "2024-12-30",
           "version": "2024-12-28"
+        },
+        {
+          "retrieved": "2025-01-01",
+          "version": "2024-12-30"
+        },
+        {
+          "retrieved": "2025-01-02",
+          "version": "2024-12-31"
         }
       ],
       "name": "Zebrafish Information Network",

{bioversions-0.6.23 → bioversions-0.6.25}/src/bioversions/version.py

@@ -7,7 +7,7 @@ __all__ = [
     "VERSION",
 ]
 
-VERSION = "0.6.23"
+VERSION = "0.6.25"
 
 
 def get_git_hash() -> str: