bioversions 0.6.20__tar.gz → 0.6.22__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (108) hide show
  1. {bioversions-0.6.20 → bioversions-0.6.22}/PKG-INFO +1 -1
  2. {bioversions-0.6.20 → bioversions-0.6.22}/docs/_data/versions.yml +18 -2
  3. {bioversions-0.6.20 → bioversions-0.6.22}/docs/img/has_release_url.svg +1 -1
  4. {bioversions-0.6.20 → bioversions-0.6.22}/docs/img/version_date_types.svg +1 -1
  5. {bioversions-0.6.20 → bioversions-0.6.22}/docs/img/version_types.svg +1 -1
  6. {bioversions-0.6.20 → bioversions-0.6.22}/docs/source/conf.py +1 -1
  7. {bioversions-0.6.20 → bioversions-0.6.22}/pyproject.toml +2 -2
  8. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/resources/versions.json +34 -2
  9. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/version.py +1 -1
  10. {bioversions-0.6.20 → bioversions-0.6.22}/.cruft.json +0 -0
  11. {bioversions-0.6.20 → bioversions-0.6.22}/.github/CODE_OF_CONDUCT.md +0 -0
  12. {bioversions-0.6.20 → bioversions-0.6.22}/.github/CONTRIBUTING.md +0 -0
  13. {bioversions-0.6.20 → bioversions-0.6.22}/.github/codecov.yml +0 -0
  14. {bioversions-0.6.20 → bioversions-0.6.22}/.github/workflows/cruft.yml +0 -0
  15. {bioversions-0.6.20 → bioversions-0.6.22}/.github/workflows/tests.yml +0 -0
  16. {bioversions-0.6.20 → bioversions-0.6.22}/.github/workflows/update.yml +0 -0
  17. {bioversions-0.6.20 → bioversions-0.6.22}/.gitignore +0 -0
  18. {bioversions-0.6.20 → bioversions-0.6.22}/.readthedocs.yml +0 -0
  19. {bioversions-0.6.20 → bioversions-0.6.22}/LICENSE +0 -0
  20. {bioversions-0.6.20 → bioversions-0.6.22}/MANIFEST.in +0 -0
  21. {bioversions-0.6.20 → bioversions-0.6.22}/README.md +0 -0
  22. {bioversions-0.6.20 → bioversions-0.6.22}/docs/_config.yml +0 -0
  23. {bioversions-0.6.20 → bioversions-0.6.22}/docs/_includes/footer.html +0 -0
  24. {bioversions-0.6.20 → bioversions-0.6.22}/docs/_includes/head.html +0 -0
  25. {bioversions-0.6.20 → bioversions-0.6.22}/docs/download.md +0 -0
  26. {bioversions-0.6.20 → bioversions-0.6.22}/docs/failures.md +0 -0
  27. {bioversions-0.6.20 → bioversions-0.6.22}/docs/index.md +0 -0
  28. {bioversions-0.6.20 → bioversions-0.6.22}/docs/source/cli.rst +0 -0
  29. {bioversions-0.6.20 → bioversions-0.6.22}/docs/source/index.rst +0 -0
  30. {bioversions-0.6.20 → bioversions-0.6.22}/docs/source/installation.rst +0 -0
  31. {bioversions-0.6.20 → bioversions-0.6.22}/docs/source/logo.png +0 -0
  32. {bioversions-0.6.20 → bioversions-0.6.22}/docs/source/usage.rst +0 -0
  33. {bioversions-0.6.20 → bioversions-0.6.22}/docs/summary.md +0 -0
  34. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/__init__.py +0 -0
  35. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/__main__.py +0 -0
  36. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/charts.py +0 -0
  37. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/cli.py +0 -0
  38. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/py.typed +0 -0
  39. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/resources/__init__.py +0 -0
  40. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/resources/update.py +0 -0
  41. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/slack_client.py +0 -0
  42. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/__init__.py +0 -0
  43. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/antibodyregistry.py +0 -0
  44. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/bigg.py +0 -0
  45. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/biogrid.py +0 -0
  46. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/cellosaurus.py +0 -0
  47. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/chebi.py +0 -0
  48. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/chembl.py +0 -0
  49. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/chemidplus.py +0 -0
  50. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/civic.py +0 -0
  51. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/complexportal.py +0 -0
  52. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/daily.py +0 -0
  53. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/depmap.py +0 -0
  54. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/dgi.py +0 -0
  55. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/disgenet.py +0 -0
  56. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/drugbank.py +0 -0
  57. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/drugcentral.py +0 -0
  58. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/ensembl.py +0 -0
  59. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/expasy.py +0 -0
  60. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/flybase.py +0 -0
  61. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/gtdb.py +0 -0
  62. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/guidetopharmacology.py +0 -0
  63. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/hgnc.py +0 -0
  64. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/homologene.py +0 -0
  65. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/icd10.py +0 -0
  66. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/icd11.py +0 -0
  67. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/icf.py +0 -0
  68. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/intact.py +0 -0
  69. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/interpro.py +0 -0
  70. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/itis.py +0 -0
  71. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/kegg.py +0 -0
  72. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/mesh.py +0 -0
  73. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/mgi.py +0 -0
  74. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/mirbase.py +0 -0
  75. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/moalmanac.py +0 -0
  76. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/msigdb.py +0 -0
  77. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/ncit.py +0 -0
  78. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/npass.py +0 -0
  79. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/obo.py +0 -0
  80. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/ols.py +0 -0
  81. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/omim.py +0 -0
  82. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/oncotree.py +0 -0
  83. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/pathbank.py +0 -0
  84. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/pathwaycommons.py +0 -0
  85. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/pfam.py +0 -0
  86. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/pombase.py +0 -0
  87. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/pr.py +0 -0
  88. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/pubchem.py +0 -0
  89. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/reactome.py +0 -0
  90. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/rfam.py +0 -0
  91. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/rgd.py +0 -0
  92. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/rhea.py +0 -0
  93. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/rxnorm.py +0 -0
  94. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/sgd.py +0 -0
  95. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/slm.py +0 -0
  96. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/stringdb.py +0 -0
  97. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/umls.py +0 -0
  98. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/uniprot.py +0 -0
  99. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/unversioned.py +0 -0
  100. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/wikipathways.py +0 -0
  101. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/sources/zfin.py +0 -0
  102. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/templates/base.html +0 -0
  103. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/templates/home.html +0 -0
  104. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/twitter_client.py +0 -0
  105. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/utils.py +0 -0
  106. {bioversions-0.6.20 → bioversions-0.6.22}/src/bioversions/wsgi.py +0 -0
  107. {bioversions-0.6.20 → bioversions-0.6.22}/tests/test_bioversions.py +0 -0
  108. {bioversions-0.6.20 → bioversions-0.6.22}/tox.ini +0 -0
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: bioversions
3
- Version: 0.6.20
3
+ Version: 0.6.22
4
4
  Summary: Get the current version for biological databases
5
5
  Project-URL: Bug Tracker, https://github.com/biopragmatics/bioversions/issues
6
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  Project-URL: Homepage, https://github.com/biopragmatics/bioversions
@@ -1,7 +1,7 @@
1
1
  annotations:
2
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  author: runner
3
- date: '2024-12-28'
4
- revision: 884
3
+ date: '2024-12-30'
4
+ revision: 886
5
5
  database:
6
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  - name: A nomenclatural ontology for biological names
7
7
  prefix: nomen
@@ -48,6 +48,8 @@ database:
48
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  version: 2024/06
49
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  - retrieved: '2024-10-16'
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  version: 2024/09
51
+ - retrieved: '2024-12-29'
52
+ version: 2024/12
51
53
  vtype: date
52
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  - name: Alzheimer's Disease Ontology
53
55
  prefix: ado
@@ -119,6 +121,8 @@ database:
119
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  version: '2024-04-19'
120
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  - retrieved: '2024-08-25'
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  version: '2024-08-15'
124
+ - retrieved: '2024-12-29'
125
+ version: '2024-12-24'
122
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  vtype: date
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  - name: Apollo Structured Vocabulary (Apollo-SV)
124
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  prefix: apollo_sv
@@ -3716,6 +3720,8 @@ database:
3716
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  version: '2024-10-17'
3717
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  - retrieved: '2024-11-17'
3718
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  version: '2024-11-12'
3723
+ - retrieved: '2024-12-29'
3724
+ version: '2024-12-18'
3719
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  vtype: date
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  - name: Mass Spectrometry Controlled Vocabulary
3721
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  prefix: ms
@@ -8239,6 +8245,10 @@ database:
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  version: '2024-12-27'
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  - retrieved: '2024-12-28'
8241
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  version: '2024-12-28'
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+ - retrieved: '2024-12-29'
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+ version: '2024-12-29'
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+ - retrieved: '2024-12-30'
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+ version: '2024-12-30'
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  vtype: date
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  - name: SWO (The Software Ontology)
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  prefix: swo
@@ -8417,6 +8427,8 @@ database:
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  version: '2024-09-04'
8418
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  - retrieved: '2024-11-22'
8419
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  version: '2024-11-04'
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+ - retrieved: '2024-12-29'
8431
+ version: '2024-12-20'
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  vtype: date
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  - name: The Echinoderm Anatomy and Development Ontology
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  prefix: ecao
@@ -10990,6 +11002,10 @@ database:
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  version: '2024-12-25'
10991
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  - retrieved: '2024-12-28'
10992
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  version: '2024-12-26'
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+ - retrieved: '2024-12-29'
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+ version: '2024-12-27'
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+ - retrieved: '2024-12-30'
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+ version: '2024-12-28'
10993
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  vtype: date
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  - name: Zebrafish Phenotype Ontology
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  prefix: zp
@@ -6,7 +6,7 @@
6
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  <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
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  <cc:Work>
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  <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
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- <dc:date>2024-12-28T01:00:04.910677</dc:date>
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+ <dc:date>2024-12-30T01:04:01.246327</dc:date>
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  <dc:format>image/svg+xml</dc:format>
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  <dc:creator>
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  <cc:Agent>
@@ -6,7 +6,7 @@
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  <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
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  <cc:Work>
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  <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
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- <dc:date>2024-12-28T01:00:04.865270</dc:date>
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+ <dc:date>2024-12-30T01:04:01.203163</dc:date>
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  <dc:format>image/svg+xml</dc:format>
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  <dc:creator>
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  <cc:Agent>
@@ -6,7 +6,7 @@
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  <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
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  <cc:Work>
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  <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
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- <dc:date>2024-12-28T01:00:04.719133</dc:date>
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+ <dc:date>2024-12-30T01:04:01.080473</dc:date>
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  <dc:format>image/svg+xml</dc:format>
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  <dc:creator>
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  <cc:Agent>
@@ -26,7 +26,7 @@ copyright = f"{date.today().year}, Charles Tapley Hoyt"
26
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  author = "Charles Tapley Hoyt"
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28
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  # The full version, including alpha/beta/rc tags.
29
- release = "0.6.20"
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+ release = "0.6.22"
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  # The short X.Y version.
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  parsed_version = re.match(
@@ -4,7 +4,7 @@ build-backend = "hatchling.build"
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5
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  [project]
6
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  name = "bioversions"
7
- version = "0.6.20"
7
+ version = "0.6.22"
8
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  description = "Get the current version for biological databases"
9
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  readme = "README.md"
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  authors = [
@@ -222,7 +222,7 @@ known-first-party = [
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  docstring-code-format = true
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224
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  [tool.bumpversion]
225
- current_version = "0.6.20"
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+ current_version = "0.6.22"
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  parse = "(?P<major>\\d+)\\.(?P<minor>\\d+)\\.(?P<patch>\\d+)(?:-(?P<release>[0-9A-Za-z-]+(?:\\.[0-9A-Za-z-]+)*))?(?:\\+(?P<build>[0-9A-Za-z-]+(?:\\.[0-9A-Za-z-]+)*))?"
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  serialize = [
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  "{major}.{minor}.{patch}-{release}+{build}",
@@ -1,7 +1,7 @@
1
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  {
2
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  "annotations": {
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- "revision": 884,
4
- "date": "2024-12-28",
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+ "revision": 886,
4
+ "date": "2024-12-30",
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  "author": "runner"
6
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  },
7
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  "database": [
@@ -90,6 +90,10 @@
90
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  {
91
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  "retrieved": "2024-10-16",
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  "version": "2024/09"
93
+ },
94
+ {
95
+ "retrieved": "2024-12-29",
96
+ "version": "2024/12"
93
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  }
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  ],
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  "vtype": "date"
@@ -221,6 +225,10 @@
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  {
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  "retrieved": "2024-08-25",
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  "version": "2024-08-15"
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+ },
229
+ {
230
+ "retrieved": "2024-12-29",
231
+ "version": "2024-12-24"
224
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  }
225
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  ],
226
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  "name": "Apollo Structured Vocabulary",
@@ -6742,6 +6750,10 @@
6742
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  {
6743
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  "retrieved": "2024-11-17",
6744
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  "version": "2024-11-12"
6753
+ },
6754
+ {
6755
+ "retrieved": "2024-12-29",
6756
+ "version": "2024-12-18"
6745
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  }
6746
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  ],
6747
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  "vtype": "date"
@@ -15136,6 +15148,14 @@
15136
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  {
15137
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  "retrieved": "2024-12-28",
15138
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  "version": "2024-12-28"
15151
+ },
15152
+ {
15153
+ "retrieved": "2024-12-29",
15154
+ "version": "2024-12-29"
15155
+ },
15156
+ {
15157
+ "retrieved": "2024-12-30",
15158
+ "version": "2024-12-30"
15139
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  }
15140
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  ],
15141
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  "name": "SwissLipids",
@@ -15480,6 +15500,10 @@
15480
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  {
15481
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  "retrieved": "2024-11-22",
15482
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  "version": "2024-11-04"
15503
+ },
15504
+ {
15505
+ "retrieved": "2024-12-29",
15506
+ "version": "2024-12-20"
15483
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  }
15484
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  ],
15485
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  "vtype": "date"
@@ -20184,6 +20208,14 @@
20184
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  {
20185
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  "retrieved": "2024-12-28",
20186
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  "version": "2024-12-26"
20211
+ },
20212
+ {
20213
+ "retrieved": "2024-12-29",
20214
+ "version": "2024-12-27"
20215
+ },
20216
+ {
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+ "retrieved": "2024-12-30",
20218
+ "version": "2024-12-28"
20187
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  }
20188
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  ],
20189
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  "name": "Zebrafish Information Network",
@@ -7,7 +7,7 @@ __all__ = [
7
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  "VERSION",
8
8
  ]
9
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10
- VERSION = "0.6.20"
10
+ VERSION = "0.6.22"
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  def get_git_hash() -> str:
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