bioversions 0.5.530__tar.gz → 0.5.532__tar.gz

{bioversions-0.5.530/src/bioversions.egg-info → bioversions-0.5.532}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: bioversions
-Version: 0.5.530
+Version: 0.5.532
 Summary: What's the current version for each biological database?
 Home-page: https://github.com/biopragmatics/bioversions
 Download-URL: https://github.com/biopragmatics/bioversions/releases

{bioversions-0.5.530 → bioversions-0.5.532}/docs/_data/versions.yml

@@ -1,7 +1,7 @@
 annotations:
   author: runner
-  date: '2024-10-31'
-  revision: 829
+  date: '2024-11-02'
+  revision: 831
 database:
 - name: A nomenclatural ontology for biological names
   prefix: nomen
@@ -371,6 +371,9 @@ database:
   - homepage: https://downloads.thebiogrid.org/BioGRID/Release-Archive/BIOGRID-4.4.238
     retrieved: '2024-10-02'
     version: 4.4.238
+  - homepage: https://downloads.thebiogrid.org/BioGRID/Release-Archive/BIOGRID-4.4.239
+    retrieved: '2024-11-02'
+    version: 4.4.239
   vtype: semver
 - name: Bioinformatics operations, data types, formats, identifiers and topics
   prefix: edam
@@ -976,6 +979,8 @@ database:
     version: 01-Sep-2024
   - retrieved: '2024-10-01'
     version: 01-Oct-2024
+  - retrieved: '2024-11-02'
+    version: 01-Nov-2024
   vtype: date
 - name: clinical LABoratory Ontology
   prefix: labo
@@ -1575,6 +1580,10 @@ database:
     homepage: https://github.com/DiseaseOntology/HumanDiseaseOntology/tree/main/src/ontology/releases/2024-09-27
     retrieved: '2024-09-28'
     version: '2024-09-27'
+  - date: '2024-11-01'
+    homepage: https://github.com/DiseaseOntology/HumanDiseaseOntology/tree/main/src/ontology/releases/2024-11-01
+    retrieved: '2024-11-02'
+    version: '2024-11-01'
   vtype: date
 - name: DisGeNet
   releases:
@@ -4878,6 +4887,12 @@ database:
   - date: '2024-10-29'
     retrieved: '2024-10-31'
     version: October 29, 2024
+  - date: '2024-10-30'
+    retrieved: '2024-11-01'
+    version: October 30, 2024
+  - date: '2024-10-31'
+    retrieved: '2024-11-02'
+    version: October 31, 2024
   vtype: date
 - name: 'OntoAvida: ontology for Avida digital evolution platform'
   prefix: ontoavida
@@ -5845,6 +5860,10 @@ database:
     homepage: https://www.pombase.org/data/releases/pombase-2024-10-01/
     retrieved: '2024-10-02'
     version: '2024-10-01'
+  - date: '2024-11-01'
+    homepage: https://www.pombase.org/data/releases/pombase-2024-11-01/
+    retrieved: '2024-11-02'
+    version: '2024-11-01'
   vtype: date
 - name: Population and Community Ontology
   prefix: pco
@@ -6066,6 +6085,9 @@ database:
   - homepage: https://ftp.ncbi.nlm.nih.gov/pubchem/Compound/Monthly/2024-10-01
     retrieved: '2024-10-01'
     version: '2024-10-01'
+  - homepage: https://ftp.ncbi.nlm.nih.gov/pubchem/Compound/Monthly/2024-11-01
+    retrieved: '2024-11-01'
+    version: '2024-11-01'
   vtype: date
 - name: Radiation Biology Ontology
   prefix: rbo
@@ -10410,6 +10432,8 @@ database:
     version: '2024-10-28'
   - retrieved: '2024-10-31'
     version: '2024-10-29'
+  - retrieved: '2024-11-02'
+    version: '2024-10-31'
   vtype: date
 - name: Zebrafish Phenotype Ontology
   prefix: zp

bioversions-0.5.532/docs/failures.md

@@ -0,0 +1,6 @@
+# Errors
+
+- failed to resolve DisGeNet
+- failed to resolve Antibody Registry
+- issue parsing HGNC: HGNC hasn't posted new data for this month under version 2024-11-01
+- failed to resolve SwissLipids

{bioversions-0.5.530 → bioversions-0.5.532}/docs/img/has_release_url.svg

@@ -6,7 +6,7 @@
   <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
    <cc:Work>
     <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
-    <dc:date>2024-10-31T01:02:41.755414</dc:date>
+    <dc:date>2024-11-02T01:00:50.608878</dc:date>
     <dc:format>image/svg+xml</dc:format>
     <dc:creator>
      <cc:Agent>

{bioversions-0.5.530 → bioversions-0.5.532}/docs/img/version_date_types.svg

@@ -6,7 +6,7 @@
   <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
    <cc:Work>
     <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
-    <dc:date>2024-10-31T01:02:41.704068</dc:date>
+    <dc:date>2024-11-02T01:00:50.553527</dc:date>
     <dc:format>image/svg+xml</dc:format>
     <dc:creator>
      <cc:Agent>

{bioversions-0.5.530 → bioversions-0.5.532}/docs/img/version_types.svg

@@ -6,7 +6,7 @@
   <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
    <cc:Work>
     <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
-    <dc:date>2024-10-31T01:02:41.623946</dc:date>
+    <dc:date>2024-11-02T01:00:50.467510</dc:date>
     <dc:format>image/svg+xml</dc:format>
     <dc:creator>
      <cc:Agent>

{bioversions-0.5.530 → bioversions-0.5.532}/setup.cfg

@@ -1,6 +1,6 @@
 [metadata]
 name = bioversions
-version = 0.5.530
+version = 0.5.532
 description = What's the current version for each biological database?
 long_description = file: README.md
 long_description_content_type = text/markdown

{bioversions-0.5.530 → bioversions-0.5.532}/src/bioversions/resources/versions.json

@@ -1,7 +1,7 @@
 {
   "annotations": {
-    "revision": 829,
-    "date": "2024-10-31",
+    "revision": 831,
+    "date": "2024-11-02",
     "author": "runner"
   },
   "database": [
@@ -676,6 +676,11 @@
           "retrieved": "2024-10-02",
           "version": "4.4.238",
           "homepage": "https://downloads.thebiogrid.org/BioGRID/Release-Archive/BIOGRID-4.4.238"
+        },
+        {
+          "retrieved": "2024-11-02",
+          "version": "4.4.239",
+          "homepage": "https://downloads.thebiogrid.org/BioGRID/Release-Archive/BIOGRID-4.4.239"
         }
       ],
       "vtype": "semver"
@@ -1788,6 +1793,10 @@
         {
           "retrieved": "2024-10-01",
           "version": "01-Oct-2024"
+        },
+        {
+          "retrieved": "2024-11-02",
+          "version": "01-Nov-2024"
         }
       ],
       "name": "CiVIC",
@@ -2852,6 +2861,12 @@
           "version": "2024-09-27",
           "homepage": "https://github.com/DiseaseOntology/HumanDiseaseOntology/tree/main/src/ontology/releases/2024-09-27",
           "date": "2024-09-27"
+        },
+        {
+          "retrieved": "2024-11-02",
+          "version": "2024-11-01",
+          "homepage": "https://github.com/DiseaseOntology/HumanDiseaseOntology/tree/main/src/ontology/releases/2024-11-01",
+          "date": "2024-11-01"
         }
       ],
       "vtype": "date"
@@ -8823,6 +8838,16 @@
           "retrieved": "2024-10-31",
           "version": "October 29, 2024",
           "date": "2024-10-29"
+        },
+        {
+          "retrieved": "2024-11-01",
+          "version": "October 30, 2024",
+          "date": "2024-10-30"
+        },
+        {
+          "retrieved": "2024-11-02",
+          "version": "October 31, 2024",
+          "date": "2024-10-31"
         }
       ],
       "name": "Online Mendelian Inheritance in Man",
@@ -10576,6 +10601,12 @@
           "version": "2024-10-01",
           "homepage": "https://www.pombase.org/data/releases/pombase-2024-10-01/",
           "date": "2024-10-01"
+        },
+        {
+          "retrieved": "2024-11-02",
+          "version": "2024-11-01",
+          "homepage": "https://www.pombase.org/data/releases/pombase-2024-11-01/",
+          "date": "2024-11-01"
         }
       ],
       "name": "PomBase",
@@ -10969,6 +11000,11 @@
           "retrieved": "2024-10-01",
           "version": "2024-10-01",
           "homepage": "https://ftp.ncbi.nlm.nih.gov/pubchem/Compound/Monthly/2024-10-01"
+        },
+        {
+          "retrieved": "2024-11-01",
+          "version": "2024-11-01",
+          "homepage": "https://ftp.ncbi.nlm.nih.gov/pubchem/Compound/Monthly/2024-11-01"
         }
       ],
       "name": "PubChem",
@@ -19117,6 +19153,10 @@
         {
           "retrieved": "2024-10-31",
           "version": "2024-10-29"
+        },
+        {
+          "retrieved": "2024-11-02",
+          "version": "2024-10-31"
         }
       ],
       "name": "Zebrafish Information Network",

{bioversions-0.5.530 → bioversions-0.5.532}/src/bioversions/version.py

@@ -9,7 +9,7 @@ __all__ = [
     "VERSION",
 ]
 
-VERSION = "0.5.530"
+VERSION = "0.5.532"
 
 
 def get_git_hash() -> str:

{bioversions-0.5.530 → bioversions-0.5.532/src/bioversions.egg-info}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: bioversions
-Version: 0.5.530
+Version: 0.5.532
 Summary: What's the current version for each biological database?
 Home-page: https://github.com/biopragmatics/bioversions
 Download-URL: https://github.com/biopragmatics/bioversions/releases

bioversions-0.5.530/docs/failures.md

@@ -1,5 +0,0 @@
-# Errors
-
-- failed to resolve DisGeNet
-- failed to resolve Antibody Registry
-- failed to resolve SwissLipids