bioversions 0.5.514__tar.gz → 0.5.516__tar.gz

{bioversions-0.5.514/src/bioversions.egg-info → bioversions-0.5.516}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: bioversions
-Version: 0.5.514
+Version: 0.5.516
 Summary: What's the current version for each biological database?
 Home-page: https://github.com/biopragmatics/bioversions
 Download-URL: https://github.com/biopragmatics/bioversions/releases

{bioversions-0.5.514 → bioversions-0.5.516}/docs/_data/versions.yml

@@ -1,7 +1,7 @@
 annotations:
-  author: cthoyt
-  date: '2024-10-15'
-  revision: 813
+  author: runner
+  date: '2024-10-17'
+  revision: 815
 database:
 - name: A nomenclatural ontology for biological names
   prefix: nomen
@@ -46,6 +46,8 @@ database:
     version: 2024/09
   - retrieved: '2024-10-15'
     version: 2024/06
+  - retrieved: '2024-10-16'
+    version: 2024/09
   vtype: date
 - name: Alzheimer's Disease Ontology
   prefix: ado
@@ -159,6 +161,8 @@ database:
     version: '2024-09-18'
   - retrieved: '2024-10-15'
     version: '2024-08-03'
+  - retrieved: '2024-10-16'
+    version: '2024-09-18'
   vtype: date
 - name: Bambara groundnut ontology
   prefix: co_366
@@ -501,6 +505,8 @@ database:
     version: '2024-09-26'
   - retrieved: '2024-10-15'
     version: '2024-04-09'
+  - retrieved: '2024-10-16'
+    version: '2024-09-26'
   vtype: date
 - name: C. elegans Gross Anatomy Ontology
   prefix: wbbt
@@ -531,6 +537,8 @@ database:
     version: '2024-09-24'
   - retrieved: '2024-10-15'
     version: '2024-07-01'
+  - retrieved: '2024-10-16'
+    version: '2024-09-24'
   vtype: date
 - name: C. elegans phenotype
   prefix: wbphenotype
@@ -577,6 +585,8 @@ database:
     version: '2024-09-26'
   - retrieved: '2024-10-15'
     version: '2024-06-05'
+  - retrieved: '2024-10-16'
+    version: '2024-09-26'
   vtype: date
 - name: Cardiovascular Disease Ontology
   prefix: cvdo
@@ -687,6 +697,8 @@ database:
     version: '2024-09-26'
   - retrieved: '2024-10-15'
     version: '2024-08-16'
+  - retrieved: '2024-10-16'
+    version: '2024-09-26'
   vtype: date
 - name: Cell Type Ontology
   prefix: cl
@@ -1020,6 +1032,8 @@ database:
     version: '2.227'
   - retrieved: '2024-10-15'
     version: '2.224'
+  - retrieved: '2024-10-16'
+    version: '2.227'
   vtype: date
 - name: Clinical Trials Ontology
   prefix: cto
@@ -1225,6 +1239,8 @@ database:
     version: '2024-09-20'
   - retrieved: '2024-10-15'
     version: '2023-11-16'
+  - retrieved: '2024-10-16'
+    version: '2024-09-20'
   vtype: date
 - name: Coronavirus Infectious Disease Ontology
   prefix: cido
@@ -1354,6 +1370,8 @@ database:
     version: 2024d_20240922
   - retrieved: '2024-10-15'
     version: 2024c_20240617
+  - retrieved: '2024-10-16'
+    version: 2024d_20240922
   vtype: other
 - name: Dicty Phenotype Ontology (DDPHENO)
   prefix: ddpheno
@@ -2104,6 +2122,8 @@ database:
     version: '4.184'
   - retrieved: '2024-10-15'
     version: '4.179'
+  - retrieved: '2024-10-16'
+    version: '4.184'
   vtype: date
 - name: Experimental Factor Ontology
   prefix: efo
@@ -2184,6 +2204,8 @@ database:
     version: 3.70.0
   - retrieved: '2024-10-15'
     version: 3.69.0
+  - retrieved: '2024-10-16'
+    version: 3.70.0
   vtype: semver
 - name: Exposure ontology
   prefix: exo
@@ -2334,6 +2356,8 @@ database:
     version: '2024-10-07'
   - retrieved: '2024-10-15'
     version: '2024-09-02'
+  - retrieved: '2024-10-16'
+    version: '2024-10-07'
   vtype: date
 - name: Flora Phenotype Ontology
   prefix: flopo
@@ -2751,6 +2775,8 @@ database:
     version: '2024-09-26'
   - retrieved: '2024-10-15'
     version: '2024-05-21'
+  - retrieved: '2024-10-16'
+    version: '2024-09-26'
   vtype: semver
 - name: Glycan Naming and Subsumption Ontology (GNOme)
   prefix: gno
@@ -3529,6 +3555,8 @@ database:
     version: '2024-09-18'
   - retrieved: '2024-10-15'
     version: '2024-08-08'
+  - retrieved: '2024-10-16'
+    version: '2024-09-18'
   vtype: date
 - name: Mass Spectrometry Controlled Vocabulary
   prefix: ms
@@ -3573,6 +3601,8 @@ database:
     version: 4.1.179
   - retrieved: '2024-10-15'
     version: 4.1.173
+  - retrieved: '2024-10-16'
+    version: 4.1.179
   vtype: date
 - name: Mathematical modeling ontology
   prefix: mamo
@@ -3631,6 +3661,8 @@ database:
     version: '2.141'
   - retrieved: '2024-10-15'
     version: '2.138'
+  - retrieved: '2024-10-16'
+    version: '2.141'
   vtype: date
 - name: Medaka Developmental Stages
   prefix: olatdv
@@ -4010,6 +4042,8 @@ database:
     version: '2024-10-01'
   - retrieved: '2024-10-15'
     version: '2024-08-06'
+  - retrieved: '2024-10-16'
+    version: '2024-10-01'
   vtype: date
 - name: MOP
   prefix: mop
@@ -4308,6 +4342,8 @@ database:
     version: '2024-08-27'
   - retrieved: '2024-10-15'
     version: '2022-10-05'
+  - retrieved: '2024-10-16'
+    version: '2024-08-27'
   vtype: date
 - name: NMR-instrument specific component of metabolomics investigations
   prefix: nmr
@@ -4775,6 +4811,9 @@ database:
   - date: '2024-10-14'
     retrieved: '2024-10-15'
     version: October 14, 2024
+  - date: '2024-10-15'
+    retrieved: '2024-10-17'
+    version: October 15, 2024
   vtype: date
 - name: 'OntoAvida: ontology for Avida digital evolution platform'
   prefix: ontoavida
@@ -5011,6 +5050,8 @@ database:
     version: '2024-09-12'
   - retrieved: '2024-10-15'
     version: '2024-06-27'
+  - retrieved: '2024-10-16'
+    version: '2024-09-12'
   vtype: date
 - name: Ontology of Genetic Susceptibility Factor
   prefix: ogsf
@@ -5121,6 +5162,8 @@ database:
     version: '2024-09-30'
   - retrieved: '2024-10-15'
     version: '2024-01-25'
+  - retrieved: '2024-10-16'
+    version: '2024-09-30'
   vtype: date
 - name: Ontology of Precision Medicine and Investigation
   prefix: opmi
@@ -5474,6 +5517,8 @@ database:
     version: '2024-09-04'
   - retrieved: '2024-10-15'
     version: '2024-03-28'
+  - retrieved: '2024-10-16'
+    version: '2024-09-04'
   vtype: date
 - name: PHI-base Ontology
   prefix: phi
@@ -6137,6 +6182,8 @@ database:
     version: '6.235'
   - retrieved: '2024-10-15'
     version: '6.230'
+  - retrieved: '2024-10-16'
+    version: '6.235'
   vtype: date
 - name: Reactome
   prefix: reactome
@@ -7796,6 +7843,8 @@ database:
     version: '2024-09-17'
   - retrieved: '2024-10-15'
     version: '2024-08-06'
+  - retrieved: '2024-10-16'
+    version: '2024-09-17'
   vtype: date
 - name: The COVID-19 Infectious Disease Ontology
   prefix: idocovid19
@@ -7838,6 +7887,8 @@ database:
     version: '2024-09-04'
   - retrieved: '2024-10-15'
     version: '2024-08-07'
+  - retrieved: '2024-10-16'
+    version: '2024-09-04'
   vtype: date
 - name: The Echinoderm Anatomy and Development Ontology
   prefix: ecao
@@ -7997,6 +8048,8 @@ database:
     version: '2024-09-03'
   - retrieved: '2024-10-15'
     version: '2024-08-07'
+  - retrieved: '2024-10-16'
+    version: '2024-09-03'
   vtype: date
 - name: UBERON
   prefix: uberon
@@ -8033,6 +8086,8 @@ database:
     version: '2024-09-04'
   - retrieved: '2024-10-15'
     version: '2017-10-31'
+  - retrieved: '2024-10-16'
+    version: '2024-09-04'
   vtype: date
 - name: Unified phenotype ontology (uPheno)
   prefix: upheno
@@ -8204,6 +8259,8 @@ database:
     version: '2024-09-22'
   - retrieved: '2024-10-15'
     version: '2024-08-11'
+  - retrieved: '2024-10-16'
+    version: '2024-09-22'
   vtype: semver
 - name: Variation Ontology
   prefix: vario
@@ -8282,6 +8339,8 @@ database:
     version: '2024-10-02'
   - retrieved: '2024-10-15'
     version: '2024-08-13'
+  - retrieved: '2024-10-16'
+    version: '2024-10-02'
   vtype: date
 - name: VEuPathDB Ontology
   prefix: eupath
@@ -8507,6 +8566,8 @@ database:
     version: '2024-09-03'
   - retrieved: '2024-10-15'
     version: '2024-08-23'
+  - retrieved: '2024-10-16'
+    version: '2024-09-03'
   vtype: date
 - name: Xenopus Phenotype Ontology
   prefix: xpo
@@ -10241,6 +10302,8 @@ database:
     version: '2024-10-13'
   - retrieved: '2024-10-15'
     version: '2024-10-14'
+  - retrieved: '2024-10-17'
+    version: '2024-10-15'
   vtype: date
 - name: Zebrafish Phenotype Ontology
   prefix: zp

{bioversions-0.5.514 → bioversions-0.5.516}/docs/failures.md

@@ -2,5 +2,4 @@
 
 - failed to resolve DisGeNet
 - failed to resolve Antibody Registry
-- failed to resolve PathBank
 - failed to resolve SwissLipids

{bioversions-0.5.514 → bioversions-0.5.516}/docs/img/has_release_url.svg

@@ -6,7 +6,7 @@
   <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
    <cc:Work>
     <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
-    <dc:date>2024-10-15T01:02:09.800391</dc:date>
+    <dc:date>2024-10-17T01:01:36.076559</dc:date>
     <dc:format>image/svg+xml</dc:format>
     <dc:creator>
      <cc:Agent>

{bioversions-0.5.514 → bioversions-0.5.516}/docs/img/version_date_types.svg

@@ -6,7 +6,7 @@
   <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
    <cc:Work>
     <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
-    <dc:date>2024-10-15T01:02:09.746710</dc:date>
+    <dc:date>2024-10-17T01:01:36.024883</dc:date>
     <dc:format>image/svg+xml</dc:format>
     <dc:creator>
      <cc:Agent>

{bioversions-0.5.514 → bioversions-0.5.516}/docs/img/version_types.svg

@@ -6,7 +6,7 @@
   <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
    <cc:Work>
     <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
-    <dc:date>2024-10-15T01:02:09.665461</dc:date>
+    <dc:date>2024-10-17T01:01:35.944601</dc:date>
     <dc:format>image/svg+xml</dc:format>
     <dc:creator>
      <cc:Agent>

{bioversions-0.5.514 → bioversions-0.5.516}/setup.cfg

@@ -1,6 +1,6 @@
 [metadata]
 name = bioversions
-version = 0.5.514
+version = 0.5.516
 description = What's the current version for each biological database?
 long_description = file: README.md
 long_description_content_type = text/markdown

{bioversions-0.5.514 → bioversions-0.5.516}/src/bioversions/resources/versions.json

@@ -1,8 +1,8 @@
 {
   "annotations": {
-    "revision": 813,
-    "date": "2024-10-15",
-    "author": "cthoyt"
+    "revision": 815,
+    "date": "2024-10-17",
+    "author": "runner"
   },
   "database": [
     {
@@ -86,6 +86,10 @@
         {
           "retrieved": "2024-10-15",
           "version": "2024/06"
+        },
+        {
+          "retrieved": "2024-10-16",
+          "version": "2024/09"
         }
       ],
       "vtype": "date"
@@ -301,6 +305,10 @@
         {
           "retrieved": "2024-10-15",
           "version": "2024-08-03"
+        },
+        {
+          "retrieved": "2024-10-16",
+          "version": "2024-09-18"
         }
       ],
       "vtype": "date"
@@ -922,6 +930,10 @@
         {
           "retrieved": "2024-10-15",
           "version": "2024-04-09"
+        },
+        {
+          "retrieved": "2024-10-16",
+          "version": "2024-09-26"
         }
       ],
       "name": "C. elegans development ontology",
@@ -983,6 +995,10 @@
         {
           "retrieved": "2024-10-15",
           "version": "2024-07-01"
+        },
+        {
+          "retrieved": "2024-10-16",
+          "version": "2024-09-24"
         }
       ],
       "vtype": "date"
@@ -1072,6 +1088,10 @@
         {
           "retrieved": "2024-10-15",
           "version": "2024-06-05"
+        },
+        {
+          "retrieved": "2024-10-16",
+          "version": "2024-09-26"
         }
       ],
       "name": "C. elegans phenotype",
@@ -1285,6 +1305,10 @@
         {
           "retrieved": "2024-10-15",
           "version": "2024-08-16"
+        },
+        {
+          "retrieved": "2024-10-16",
+          "version": "2024-09-26"
         }
       ],
       "prefix": "cl",
@@ -1875,6 +1899,10 @@
         {
           "retrieved": "2024-10-15",
           "version": "2.224"
+        },
+        {
+          "retrieved": "2024-10-16",
+          "version": "2.227"
         }
       ],
       "vtype": "date"
@@ -2248,6 +2276,10 @@
         {
           "retrieved": "2024-10-15",
           "version": "2023-11-16"
+        },
+        {
+          "retrieved": "2024-10-16",
+          "version": "2024-09-20"
         }
       ],
       "vtype": "date"
@@ -2496,6 +2528,10 @@
         {
           "retrieved": "2024-10-15",
           "version": "2024c_20240617"
+        },
+        {
+          "retrieved": "2024-10-16",
+          "version": "2024d_20240922"
         }
       ],
       "vtype": "other"
@@ -3844,6 +3880,10 @@
         {
           "retrieved": "2024-10-15",
           "version": "4.179"
+        },
+        {
+          "retrieved": "2024-10-16",
+          "version": "4.184"
         }
       ],
       "vtype": "date"
@@ -4003,6 +4043,10 @@
         {
           "retrieved": "2024-10-15",
           "version": "3.69.0"
+        },
+        {
+          "retrieved": "2024-10-16",
+          "version": "3.70.0"
         }
       ],
       "vtype": "semver"
@@ -4299,6 +4343,10 @@
         {
           "retrieved": "2024-10-15",
           "version": "2024-09-02"
+        },
+        {
+          "retrieved": "2024-10-16",
+          "version": "2024-10-07"
         }
       ],
       "vtype": "date"
@@ -5033,6 +5081,10 @@
         {
           "retrieved": "2024-10-15",
           "version": "2024-05-21"
+        },
+        {
+          "retrieved": "2024-10-16",
+          "version": "2024-09-26"
         }
       ],
       "name": "Glycan Naming and Subsumption Ontology",
@@ -6402,6 +6454,10 @@
         {
           "retrieved": "2024-10-15",
           "version": "2024-08-08"
+        },
+        {
+          "retrieved": "2024-10-16",
+          "version": "2024-09-18"
         }
       ],
       "vtype": "date"
@@ -6486,6 +6542,10 @@
         {
           "retrieved": "2024-10-15",
           "version": "4.1.173"
+        },
+        {
+          "retrieved": "2024-10-16",
+          "version": "4.1.179"
         }
       ],
       "name": "Mass spectrometry ontology",
@@ -6601,6 +6661,10 @@
         {
           "retrieved": "2024-10-15",
           "version": "2.138"
+        },
+        {
+          "retrieved": "2024-10-16",
+          "version": "2.141"
         }
       ],
       "vtype": "date"
@@ -7298,6 +7362,10 @@
         {
           "retrieved": "2024-10-15",
           "version": "2024-08-06"
+        },
+        {
+          "retrieved": "2024-10-16",
+          "version": "2024-10-01"
         }
       ],
       "vtype": "date"
@@ -7832,6 +7900,10 @@
         {
           "retrieved": "2024-10-15",
           "version": "2022-10-05"
+        },
+        {
+          "retrieved": "2024-10-16",
+          "version": "2024-08-27"
         }
       ],
       "name": "Next Generation Biobanking Ontology",
@@ -8632,6 +8704,11 @@
           "retrieved": "2024-10-15",
           "version": "October 14, 2024",
           "date": "2024-10-14"
+        },
+        {
+          "retrieved": "2024-10-17",
+          "version": "October 15, 2024",
+          "date": "2024-10-15"
         }
       ],
       "name": "Online Mendelian Inheritance in Man",
@@ -9087,6 +9164,10 @@
         {
           "retrieved": "2024-10-15",
           "version": "2024-06-27"
+        },
+        {
+          "retrieved": "2024-10-16",
+          "version": "2024-09-12"
         }
       ],
       "vtype": "date"
@@ -9298,6 +9379,10 @@
         {
           "retrieved": "2024-10-15",
           "version": "2024-01-25"
+        },
+        {
+          "retrieved": "2024-10-16",
+          "version": "2024-09-30"
         }
       ],
       "name": "Ontology of Organizational Structures of Trauma centers and Trauma systems",
@@ -9924,6 +10009,10 @@
         {
           "retrieved": "2024-10-15",
           "version": "2024-03-28"
+        },
+        {
+          "retrieved": "2024-10-16",
+          "version": "2024-09-04"
         }
       ],
       "prefix": "pato",
@@ -11124,6 +11213,10 @@
         {
           "retrieved": "2024-10-15",
           "version": "6.230"
+        },
+        {
+          "retrieved": "2024-10-16",
+          "version": "6.235"
         }
       ],
       "vtype": "date"
@@ -14342,6 +14435,10 @@
         {
           "retrieved": "2024-10-15",
           "version": "2024-08-06"
+        },
+        {
+          "retrieved": "2024-10-16",
+          "version": "2024-09-17"
         }
       ],
       "vtype": "date"
@@ -14424,6 +14521,10 @@
         {
           "retrieved": "2024-10-15",
           "version": "2024-08-07"
+        },
+        {
+          "retrieved": "2024-10-16",
+          "version": "2024-09-04"
         }
       ],
       "vtype": "date"
@@ -14726,6 +14827,10 @@
         {
           "retrieved": "2024-10-15",
           "version": "2024-08-07"
+        },
+        {
+          "retrieved": "2024-10-16",
+          "version": "2024-09-03"
         }
       ],
       "name": "Uber Anatomy Ontology",
@@ -14795,6 +14900,10 @@
         {
           "retrieved": "2024-10-15",
           "version": "2017-10-31"
+        },
+        {
+          "retrieved": "2024-10-16",
+          "version": "2024-09-04"
         }
       ],
       "name": "Unified Phenotype Ontology",
@@ -15096,6 +15205,10 @@
         {
           "retrieved": "2024-10-15",
           "version": "2024-08-11"
+        },
+        {
+          "retrieved": "2024-10-16",
+          "version": "2024-09-22"
         }
       ],
       "vtype": "semver"
@@ -15246,6 +15359,10 @@
         {
           "retrieved": "2024-10-15",
           "version": "2024-08-13"
+        },
+        {
+          "retrieved": "2024-10-16",
+          "version": "2024-10-02"
         }
       ],
       "vtype": "date"
@@ -15613,6 +15730,10 @@
         {
           "retrieved": "2024-10-15",
           "version": "2024-08-23"
+        },
+        {
+          "retrieved": "2024-10-16",
+          "version": "2024-09-03"
         }
       ],
       "vtype": "date"
@@ -18794,6 +18915,10 @@
         {
           "retrieved": "2024-10-15",
           "version": "2024-10-14"
+        },
+        {
+          "retrieved": "2024-10-17",
+          "version": "2024-10-15"
         }
       ],
       "name": "Zebrafish Information Network",

{bioversions-0.5.514 → bioversions-0.5.516}/src/bioversions/version.py

@@ -9,7 +9,7 @@ __all__ = [
     "VERSION",
 ]
 
-VERSION = "0.5.514"
+VERSION = "0.5.516"
 
 
 def get_git_hash() -> str:

{bioversions-0.5.514 → bioversions-0.5.516/src/bioversions.egg-info}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: bioversions
-Version: 0.5.514
+Version: 0.5.516
 Summary: What's the current version for each biological database?
 Home-page: https://github.com/biopragmatics/bioversions
 Download-URL: https://github.com/biopragmatics/bioversions/releases