bioversions 0.5.501__tar.gz → 0.5.503__tar.gz

{bioversions-0.5.501/src/bioversions.egg-info → bioversions-0.5.503}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: bioversions
-Version: 0.5.501
+Version: 0.5.503
 Summary: What's the current version for each biological database?
 Home-page: https://github.com/biopragmatics/bioversions
 Download-URL: https://github.com/biopragmatics/bioversions/releases

{bioversions-0.5.501 → bioversions-0.5.503}/docs/_data/versions.yml

@@ -1,7 +1,7 @@
 annotations:
   author: runner
-  date: '2024-10-03'
-  revision: 800
+  date: '2024-10-05'
+  revision: 802
 database:
 - name: A nomenclatural ontology for biological names
   prefix: nomen
@@ -2768,6 +2768,10 @@ database:
     homepage: https://www.guidetopharmacology.org/DATA/public_iuphardb_v2024.2.zip
     retrieved: '2024-06-27'
     version: '2024.2'
+  - date: '2024-10-03'
+    homepage: https://www.guidetopharmacology.org/DATA/public_iuphardb_v2024.3.zip
+    retrieved: '2024-10-04'
+    version: '2024.3'
   vtype: year_minor
 - name: Health Surveillance Ontology
   prefix: hso
@@ -3246,6 +3250,10 @@ database:
     homepage: ftp://ftp.ebi.ac.uk/pub/databases/interpro/101.0/
     retrieved: '2024-07-30'
     version: '101.0'
+  - date: '2024-10-03'
+    homepage: ftp://ftp.ebi.ac.uk/pub/databases/interpro/102.0/
+    retrieved: '2024-10-04'
+    version: '102.0'
   vtype: semver_minor
 - name: ITIS
   prefix: itis
@@ -3304,6 +3312,10 @@ database:
     version: 26-Jun-2024
   - retrieved: '2024-08-15'
     version: ''
+  - retrieved: '2024-10-04'
+    version: 31-Aug-2023
+  - retrieved: '2024-10-05'
+    version: ''
   vtype: date
 - name: KEGG
   prefix: kegg.pathway
@@ -3841,6 +3853,10 @@ database:
     homepage: https://github.com/vanallenlab/moalmanac-db/releases/tag/v.2024-09-05
     retrieved: '2024-09-06'
     version: '2024-09-05'
+  - date: '2024-10-03'
+    homepage: https://github.com/vanallenlab/moalmanac-db/releases/tag/v.2024-10-03
+    retrieved: '2024-10-04'
+    version: '2024-10-03'
   vtype: date
 - name: Molecular Process Ontology
   prefix: mop
@@ -4655,6 +4671,12 @@ database:
   - date: '2024-10-01'
     retrieved: '2024-10-03'
     version: October 1, 2024
+  - date: '2024-10-02'
+    retrieved: '2024-10-04'
+    version: October 2, 2024
+  - date: '2024-10-03'
+    retrieved: '2024-10-05'
+    version: October 3, 2024
   vtype: date
 - name: 'OntoAvida: ontology for Avida digital evolution platform'
   prefix: ontoavida
@@ -7974,6 +7996,10 @@ database:
     homepage: ftp://ftp.uniprot.org/pub/databases/uniprot/previous_releases/release-2024_04/
     retrieved: '2024-07-26'
     version: '2024_04'
+  - date: '2024-05-01'
+    homepage: ftp://ftp.uniprot.org/pub/databases/uniprot/previous_releases/release-2024_05/
+    retrieved: '2024-10-04'
+    version: '2024_05'
   vtype: month
 - name: Unit Ontology
   prefix: uo
@@ -10039,6 +10065,10 @@ database:
     version: '2024-09-29'
   - retrieved: '2024-10-02'
     version: '2024-09-30'
+  - retrieved: '2024-10-04'
+    version: '2024-10-02'
+  - retrieved: '2024-10-05'
+    version: '2024-10-03'
   vtype: date
 - name: Zebrafish Phenotype Ontology
   prefix: zp

bioversions-0.5.503/docs/failures.md

@@ -0,0 +1,6 @@
+# Errors
+
+- failed to resolve DisGeNet
+- failed to resolve Antibody Registry
+- issue parsing HGNC: max() arg is an empty sequence
+- failed to resolve SwissLipids

{bioversions-0.5.501 → bioversions-0.5.503}/docs/img/has_release_url.svg

@@ -6,7 +6,7 @@
   <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
    <cc:Work>
     <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
-    <dc:date>2024-10-03T01:02:12.293993</dc:date>
+    <dc:date>2024-10-05T01:00:32.982798</dc:date>
     <dc:format>image/svg+xml</dc:format>
     <dc:creator>
      <cc:Agent>

{bioversions-0.5.501 → bioversions-0.5.503}/docs/img/version_date_types.svg

@@ -6,7 +6,7 @@
   <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
    <cc:Work>
     <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
-    <dc:date>2024-10-03T01:02:12.238925</dc:date>
+    <dc:date>2024-10-05T01:00:32.928979</dc:date>
     <dc:format>image/svg+xml</dc:format>
     <dc:creator>
      <cc:Agent>

{bioversions-0.5.501 → bioversions-0.5.503}/docs/img/version_types.svg

@@ -6,7 +6,7 @@
   <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
    <cc:Work>
     <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
-    <dc:date>2024-10-03T01:02:12.156642</dc:date>
+    <dc:date>2024-10-05T01:00:32.847310</dc:date>
     <dc:format>image/svg+xml</dc:format>
     <dc:creator>
      <cc:Agent>

{bioversions-0.5.501 → bioversions-0.5.503}/setup.cfg

@@ -1,6 +1,6 @@
 [metadata]
 name = bioversions
-version = 0.5.501
+version = 0.5.503
 description = What's the current version for each biological database?
 long_description = file: README.md
 long_description_content_type = text/markdown

{bioversions-0.5.501 → bioversions-0.5.503}/src/bioversions/resources/versions.json

@@ -1,7 +1,7 @@
 {
   "annotations": {
-    "revision": 800,
-    "date": "2024-10-03",
+    "revision": 802,
+    "date": "2024-10-05",
     "author": "runner"
   },
   "database": [
@@ -5045,6 +5045,12 @@
           "version": "2024.2",
           "homepage": "https://www.guidetopharmacology.org/DATA/public_iuphardb_v2024.2.zip",
           "date": "2024-06-26"
+        },
+        {
+          "retrieved": "2024-10-04",
+          "version": "2024.3",
+          "homepage": "https://www.guidetopharmacology.org/DATA/public_iuphardb_v2024.3.zip",
+          "date": "2024-10-03"
         }
       ],
       "name": "Guide to Pharmacology",
@@ -5874,6 +5880,12 @@
           "version": "101.0",
           "homepage": "ftp://ftp.ebi.ac.uk/pub/databases/interpro/101.0/",
           "date": "2024-07-25"
+        },
+        {
+          "retrieved": "2024-10-04",
+          "version": "102.0",
+          "homepage": "ftp://ftp.ebi.ac.uk/pub/databases/interpro/102.0/",
+          "date": "2024-10-03"
         }
       ],
       "vtype": "semver_minor"
@@ -5987,6 +5999,14 @@
         {
           "retrieved": "2024-08-15",
           "version": ""
+        },
+        {
+          "retrieved": "2024-10-04",
+          "version": "31-Aug-2023"
+        },
+        {
+          "retrieved": "2024-10-05",
+          "version": ""
         }
       ],
       "name": "ITIS",
@@ -6969,6 +6989,12 @@
           "version": "2024-09-05",
           "homepage": "https://github.com/vanallenlab/moalmanac-db/releases/tag/v.2024-09-05",
           "date": "2024-09-05"
+        },
+        {
+          "retrieved": "2024-10-04",
+          "version": "2024-10-03",
+          "homepage": "https://github.com/vanallenlab/moalmanac-db/releases/tag/v.2024-10-03",
+          "date": "2024-10-03"
         }
       ],
       "name": "Molecular Oncology Almanac",
@@ -8408,6 +8434,16 @@
           "retrieved": "2024-10-03",
           "version": "October 1, 2024",
           "date": "2024-10-01"
+        },
+        {
+          "retrieved": "2024-10-04",
+          "version": "October 2, 2024",
+          "date": "2024-10-02"
+        },
+        {
+          "retrieved": "2024-10-05",
+          "version": "October 3, 2024",
+          "date": "2024-10-03"
         }
       ],
       "name": "Online Mendelian Inheritance in Man",
@@ -14659,6 +14695,12 @@
           "version": "2024_04",
           "homepage": "ftp://ftp.uniprot.org/pub/databases/uniprot/previous_releases/release-2024_04/",
           "date": "2024-04-01"
+        },
+        {
+          "retrieved": "2024-10-04",
+          "version": "2024_05",
+          "homepage": "ftp://ftp.uniprot.org/pub/databases/uniprot/previous_releases/release-2024_05/",
+          "date": "2024-05-01"
         }
       ],
       "vtype": "month"
@@ -18412,6 +18454,14 @@
         {
           "retrieved": "2024-10-02",
           "version": "2024-09-30"
+        },
+        {
+          "retrieved": "2024-10-04",
+          "version": "2024-10-02"
+        },
+        {
+          "retrieved": "2024-10-05",
+          "version": "2024-10-03"
         }
       ],
       "name": "Zebrafish Information Network",

{bioversions-0.5.501 → bioversions-0.5.503}/src/bioversions/version.py

@@ -9,7 +9,7 @@ __all__ = [
     "VERSION",
 ]
 
-VERSION = "0.5.501"
+VERSION = "0.5.503"
 
 
 def get_git_hash() -> str:

{bioversions-0.5.501 → bioversions-0.5.503/src/bioversions.egg-info}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: bioversions
-Version: 0.5.501
+Version: 0.5.503
 Summary: What's the current version for each biological database?
 Home-page: https://github.com/biopragmatics/bioversions
 Download-URL: https://github.com/biopragmatics/bioversions/releases

bioversions-0.5.501/docs/failures.md

@@ -1,7 +0,0 @@
-# Errors
-
-- failed to resolve DisGeNet
-- failed to resolve Antibody Registry
-- failed to resolve PathBank
-- failed to resolve SwissLipids
-- failed to resolve Zebrafish Information Network