bioversions 0.5.439__tar.gz → 0.5.441__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (100) hide show
  1. {bioversions-0.5.439/src/bioversions.egg-info → bioversions-0.5.441}/PKG-INFO +1 -1
  2. {bioversions-0.5.439 → bioversions-0.5.441}/docs/_data/versions.yml +23 -2
  3. {bioversions-0.5.439 → bioversions-0.5.441}/docs/img/has_release_url.svg +1 -1
  4. {bioversions-0.5.439 → bioversions-0.5.441}/docs/img/version_date_types.svg +1 -1
  5. {bioversions-0.5.439 → bioversions-0.5.441}/docs/img/version_types.svg +1 -1
  6. {bioversions-0.5.439 → bioversions-0.5.441}/setup.cfg +1 -1
  7. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/resources/versions.json +39 -2
  8. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/version.py +1 -1
  9. {bioversions-0.5.439 → bioversions-0.5.441/src/bioversions.egg-info}/PKG-INFO +1 -1
  10. {bioversions-0.5.439 → bioversions-0.5.441}/LICENSE +0 -0
  11. {bioversions-0.5.439 → bioversions-0.5.441}/MANIFEST.in +0 -0
  12. {bioversions-0.5.439 → bioversions-0.5.441}/README.md +0 -0
  13. {bioversions-0.5.439 → bioversions-0.5.441}/docs/_config.yml +0 -0
  14. {bioversions-0.5.439 → bioversions-0.5.441}/docs/_includes/footer.html +0 -0
  15. {bioversions-0.5.439 → bioversions-0.5.441}/docs/_includes/head.html +0 -0
  16. {bioversions-0.5.439 → bioversions-0.5.441}/docs/download.md +0 -0
  17. {bioversions-0.5.439 → bioversions-0.5.441}/docs/failures.md +0 -0
  18. {bioversions-0.5.439 → bioversions-0.5.441}/docs/index.md +0 -0
  19. {bioversions-0.5.439 → bioversions-0.5.441}/docs/source/logo.png +0 -0
  20. {bioversions-0.5.439 → bioversions-0.5.441}/docs/summary.md +0 -0
  21. {bioversions-0.5.439 → bioversions-0.5.441}/pyproject.toml +0 -0
  22. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/__init__.py +0 -0
  23. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/__main__.py +0 -0
  24. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/charts.py +0 -0
  25. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/cli.py +0 -0
  26. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/py.typed +0 -0
  27. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/resources/__init__.py +0 -0
  28. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/resources/update.py +0 -0
  29. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/slack_client.py +0 -0
  30. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/__init__.py +0 -0
  31. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/antibodyregistry.py +0 -0
  32. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/bigg.py +0 -0
  33. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/biogrid.py +0 -0
  34. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/cellosaurus.py +0 -0
  35. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/chebi.py +0 -0
  36. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/chembl.py +0 -0
  37. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/chemidplus.py +0 -0
  38. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/civic.py +0 -0
  39. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/complexportal.py +0 -0
  40. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/daily.py +0 -0
  41. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/depmap.py +0 -0
  42. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/dgi.py +0 -0
  43. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/disgenet.py +0 -0
  44. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/drugbank.py +0 -0
  45. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/drugcentral.py +0 -0
  46. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/ensembl.py +0 -0
  47. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/expasy.py +0 -0
  48. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/flybase.py +0 -0
  49. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/guidetopharmacology.py +0 -0
  50. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/hgnc.py +0 -0
  51. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/homologene.py +0 -0
  52. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/icd10.py +0 -0
  53. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/icd11.py +0 -0
  54. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/icf.py +0 -0
  55. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/intact.py +0 -0
  56. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/interpro.py +0 -0
  57. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/itis.py +0 -0
  58. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/kegg.py +0 -0
  59. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/mesh.py +0 -0
  60. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/mgi.py +0 -0
  61. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/mirbase.py +0 -0
  62. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/moalmanac.py +0 -0
  63. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/msigdb.py +0 -0
  64. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/ncit.py +0 -0
  65. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/npass.py +0 -0
  66. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/obo.py +0 -0
  67. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/ols.py +0 -0
  68. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/omim.py +0 -0
  69. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/oncotree.py +0 -0
  70. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/pathbank.py +0 -0
  71. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/pathwaycommons.py +0 -0
  72. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/pfam.py +0 -0
  73. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/pombase.py +0 -0
  74. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/pr.py +0 -0
  75. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/pubchem.py +0 -0
  76. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/reactome.py +0 -0
  77. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/rfam.py +0 -0
  78. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/rgd.py +0 -0
  79. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/rhea.py +0 -0
  80. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/rxnorm.py +0 -0
  81. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/sgd.py +0 -0
  82. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/slm.py +0 -0
  83. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/stringdb.py +0 -0
  84. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/umls.py +0 -0
  85. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/uniprot.py +0 -0
  86. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/unversioned.py +0 -0
  87. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/wikipathways.py +0 -0
  88. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/sources/zfin.py +0 -0
  89. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/templates/base.html +0 -0
  90. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/templates/home.html +0 -0
  91. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/twitter_client.py +0 -0
  92. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/utils.py +0 -0
  93. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions/wsgi.py +0 -0
  94. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions.egg-info/SOURCES.txt +0 -0
  95. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions.egg-info/dependency_links.txt +0 -0
  96. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions.egg-info/entry_points.txt +0 -0
  97. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions.egg-info/not-zip-safe +0 -0
  98. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions.egg-info/requires.txt +0 -0
  99. {bioversions-0.5.439 → bioversions-0.5.441}/src/bioversions.egg-info/top_level.txt +0 -0
  100. {bioversions-0.5.439 → bioversions-0.5.441}/tests/test_bioversions.py +0 -0
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: bioversions
3
- Version: 0.5.439
3
+ Version: 0.5.441
4
4
  Summary: What's the current version for each biological database?
5
5
  Home-page: https://github.com/biopragmatics/bioversions
6
6
  Download-URL: https://github.com/biopragmatics/bioversions/releases
@@ -1,7 +1,7 @@
1
1
  annotations:
2
2
  author: runner
3
- date: '2024-07-30'
4
- revision: 739
3
+ date: '2024-08-01'
4
+ revision: 741
5
5
  database:
6
6
  - name: A nomenclatural ontology for biological names
7
7
  prefix: nomen
@@ -903,6 +903,8 @@ database:
903
903
  version: 01-Jun-2024
904
904
  - retrieved: '2024-07-02'
905
905
  version: 01-Jul-2024
906
+ - retrieved: '2024-08-01'
907
+ version: 01-Aug-2024
906
908
  vtype: date
907
909
  - name: clinical LABoratory Ontology
908
910
  prefix: labo
@@ -1452,6 +1454,10 @@ database:
1452
1454
  homepage: https://github.com/DiseaseOntology/HumanDiseaseOntology/tree/main/src/ontology/releases/2024-06-28
1453
1455
  retrieved: '2024-06-30'
1454
1456
  version: '2024-06-28'
1457
+ - date: '2024-07-31'
1458
+ homepage: https://github.com/DiseaseOntology/HumanDiseaseOntology/tree/main/src/ontology/releases/2024-07-31
1459
+ retrieved: '2024-08-01'
1460
+ version: '2024-07-31'
1455
1461
  vtype: date
1456
1462
  - name: DisGeNet
1457
1463
  releases:
@@ -3839,6 +3845,8 @@ database:
3839
3845
  version: '6.24'
3840
3846
  - retrieved: '2024-07-30'
3841
3847
  version: '6.13'
3848
+ - retrieved: '2024-07-31'
3849
+ version: '6.24'
3842
3850
  vtype: semver_minor
3843
3851
  - name: Mouse gross anatomy and development, timed
3844
3852
  prefix: emap
@@ -4428,6 +4436,12 @@ database:
4428
4436
  - date: '2024-07-26'
4429
4437
  retrieved: '2024-07-28'
4430
4438
  version: July 26, 2024
4439
+ - date: '2024-07-29'
4440
+ retrieved: '2024-07-31'
4441
+ version: July 29, 2024
4442
+ - date: '2024-07-30'
4443
+ retrieved: '2024-08-01'
4444
+ version: July 30, 2024
4431
4445
  vtype: date
4432
4446
  - name: 'OntoAvida: ontology for Avida digital evolution platform'
4433
4447
  prefix: ontoavida
@@ -5539,6 +5553,9 @@ database:
5539
5553
  - homepage: https://ftp.ncbi.nlm.nih.gov/pubchem/Compound/Monthly/2024-07-01
5540
5554
  retrieved: '2024-07-01'
5541
5555
  version: '2024-07-01'
5556
+ - homepage: https://ftp.ncbi.nlm.nih.gov/pubchem/Compound/Monthly/2024-08-01
5557
+ retrieved: '2024-08-01'
5558
+ version: '2024-08-01'
5542
5559
  vtype: date
5543
5560
  - name: Radiation Biology Ontology
5544
5561
  prefix: rbo
@@ -9580,6 +9597,10 @@ database:
9580
9597
  version: '2024-07-27'
9581
9598
  - retrieved: '2024-07-30'
9582
9599
  version: '2024-07-28'
9600
+ - retrieved: '2024-07-31'
9601
+ version: '2024-07-29'
9602
+ - retrieved: '2024-08-01'
9603
+ version: '2024-07-30'
9583
9604
  vtype: date
9584
9605
  - name: Zebrafish Phenotype Ontology
9585
9606
  prefix: zp
@@ -6,7 +6,7 @@
6
6
  <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
7
7
  <cc:Work>
8
8
  <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
9
- <dc:date>2024-07-30T00:54:42.147809</dc:date>
9
+ <dc:date>2024-08-01T00:59:36.634272</dc:date>
10
10
  <dc:format>image/svg+xml</dc:format>
11
11
  <dc:creator>
12
12
  <cc:Agent>
@@ -6,7 +6,7 @@
6
6
  <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
7
7
  <cc:Work>
8
8
  <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
9
- <dc:date>2024-07-30T00:54:42.094892</dc:date>
9
+ <dc:date>2024-08-01T00:59:36.579684</dc:date>
10
10
  <dc:format>image/svg+xml</dc:format>
11
11
  <dc:creator>
12
12
  <cc:Agent>
@@ -6,7 +6,7 @@
6
6
  <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
7
7
  <cc:Work>
8
8
  <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
9
- <dc:date>2024-07-30T00:54:42.014966</dc:date>
9
+ <dc:date>2024-08-01T00:59:36.496943</dc:date>
10
10
  <dc:format>image/svg+xml</dc:format>
11
11
  <dc:creator>
12
12
  <cc:Agent>
@@ -1,6 +1,6 @@
1
1
  [metadata]
2
2
  name = bioversions
3
- version = 0.5.439
3
+ version = 0.5.441
4
4
  description = What's the current version for each biological database?
5
5
  long_description = file: README.md
6
6
  long_description_content_type = text/markdown
@@ -1,7 +1,7 @@
1
1
  {
2
2
  "annotations": {
3
- "revision": 739,
4
- "date": "2024-07-30",
3
+ "revision": 741,
4
+ "date": "2024-08-01",
5
5
  "author": "runner"
6
6
  },
7
7
  "database": [
@@ -1647,6 +1647,10 @@
1647
1647
  {
1648
1648
  "retrieved": "2024-07-02",
1649
1649
  "version": "01-Jul-2024"
1650
+ },
1651
+ {
1652
+ "retrieved": "2024-08-01",
1653
+ "version": "01-Aug-2024"
1650
1654
  }
1651
1655
  ],
1652
1656
  "name": "CiVIC",
@@ -2619,6 +2623,12 @@
2619
2623
  "version": "2024-06-28",
2620
2624
  "homepage": "https://github.com/DiseaseOntology/HumanDiseaseOntology/tree/main/src/ontology/releases/2024-06-28",
2621
2625
  "date": "2024-06-28"
2626
+ },
2627
+ {
2628
+ "retrieved": "2024-08-01",
2629
+ "version": "2024-07-31",
2630
+ "homepage": "https://github.com/DiseaseOntology/HumanDiseaseOntology/tree/main/src/ontology/releases/2024-07-31",
2631
+ "date": "2024-07-31"
2622
2632
  }
2623
2633
  ],
2624
2634
  "vtype": "date"
@@ -6977,6 +6987,10 @@
6977
6987
  {
6978
6988
  "retrieved": "2024-07-30",
6979
6989
  "version": "6.13"
6990
+ },
6991
+ {
6992
+ "retrieved": "2024-07-31",
6993
+ "version": "6.24"
6980
6994
  }
6981
6995
  ],
6982
6996
  "name": "Mouse Genome Database",
@@ -8003,6 +8017,16 @@
8003
8017
  "retrieved": "2024-07-28",
8004
8018
  "version": "July 26, 2024",
8005
8019
  "date": "2024-07-26"
8020
+ },
8021
+ {
8022
+ "retrieved": "2024-07-31",
8023
+ "version": "July 29, 2024",
8024
+ "date": "2024-07-29"
8025
+ },
8026
+ {
8027
+ "retrieved": "2024-08-01",
8028
+ "version": "July 30, 2024",
8029
+ "date": "2024-07-30"
8006
8030
  }
8007
8031
  ],
8008
8032
  "name": "Online Mendelian Inheritance in Man",
@@ -10007,6 +10031,11 @@
10007
10031
  "retrieved": "2024-07-01",
10008
10032
  "version": "2024-07-01",
10009
10033
  "homepage": "https://ftp.ncbi.nlm.nih.gov/pubchem/Compound/Monthly/2024-07-01"
10034
+ },
10035
+ {
10036
+ "retrieved": "2024-08-01",
10037
+ "version": "2024-08-01",
10038
+ "homepage": "https://ftp.ncbi.nlm.nih.gov/pubchem/Compound/Monthly/2024-08-01"
10010
10039
  }
10011
10040
  ],
10012
10041
  "name": "PubChem",
@@ -17562,6 +17591,14 @@
17562
17591
  {
17563
17592
  "retrieved": "2024-07-30",
17564
17593
  "version": "2024-07-28"
17594
+ },
17595
+ {
17596
+ "retrieved": "2024-07-31",
17597
+ "version": "2024-07-29"
17598
+ },
17599
+ {
17600
+ "retrieved": "2024-08-01",
17601
+ "version": "2024-07-30"
17565
17602
  }
17566
17603
  ],
17567
17604
  "name": "Zebrafish Information Network",
@@ -9,7 +9,7 @@ __all__ = [
9
9
  "VERSION",
10
10
  ]
11
11
 
12
- VERSION = "0.5.439"
12
+ VERSION = "0.5.441"
13
13
 
14
14
 
15
15
  def get_git_hash() -> str:
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: bioversions
3
- Version: 0.5.439
3
+ Version: 0.5.441
4
4
  Summary: What's the current version for each biological database?
5
5
  Home-page: https://github.com/biopragmatics/bioversions
6
6
  Download-URL: https://github.com/biopragmatics/bioversions/releases
File without changes
File without changes
File without changes