bioversions 0.5.435__tar.gz → 0.5.436__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (100) hide show
  1. {bioversions-0.5.435/src/bioversions.egg-info → bioversions-0.5.436}/PKG-INFO +1 -1
  2. {bioversions-0.5.435 → bioversions-0.5.436}/docs/_data/versions.yml +7 -2
  3. {bioversions-0.5.435 → bioversions-0.5.436}/docs/failures.md +1 -0
  4. {bioversions-0.5.435 → bioversions-0.5.436}/docs/img/has_release_url.svg +1 -1
  5. {bioversions-0.5.435 → bioversions-0.5.436}/docs/img/version_date_types.svg +1 -1
  6. {bioversions-0.5.435 → bioversions-0.5.436}/docs/img/version_types.svg +1 -1
  7. {bioversions-0.5.435 → bioversions-0.5.436}/setup.cfg +1 -1
  8. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/resources/versions.json +11 -2
  9. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/version.py +1 -1
  10. {bioversions-0.5.435 → bioversions-0.5.436/src/bioversions.egg-info}/PKG-INFO +1 -1
  11. {bioversions-0.5.435 → bioversions-0.5.436}/LICENSE +0 -0
  12. {bioversions-0.5.435 → bioversions-0.5.436}/MANIFEST.in +0 -0
  13. {bioversions-0.5.435 → bioversions-0.5.436}/README.md +0 -0
  14. {bioversions-0.5.435 → bioversions-0.5.436}/docs/_config.yml +0 -0
  15. {bioversions-0.5.435 → bioversions-0.5.436}/docs/_includes/footer.html +0 -0
  16. {bioversions-0.5.435 → bioversions-0.5.436}/docs/_includes/head.html +0 -0
  17. {bioversions-0.5.435 → bioversions-0.5.436}/docs/download.md +0 -0
  18. {bioversions-0.5.435 → bioversions-0.5.436}/docs/index.md +0 -0
  19. {bioversions-0.5.435 → bioversions-0.5.436}/docs/source/logo.png +0 -0
  20. {bioversions-0.5.435 → bioversions-0.5.436}/docs/summary.md +0 -0
  21. {bioversions-0.5.435 → bioversions-0.5.436}/pyproject.toml +0 -0
  22. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/__init__.py +0 -0
  23. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/__main__.py +0 -0
  24. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/charts.py +0 -0
  25. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/cli.py +0 -0
  26. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/py.typed +0 -0
  27. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/resources/__init__.py +0 -0
  28. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/resources/update.py +0 -0
  29. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/slack_client.py +0 -0
  30. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/__init__.py +0 -0
  31. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/antibodyregistry.py +0 -0
  32. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/bigg.py +0 -0
  33. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/biogrid.py +0 -0
  34. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/cellosaurus.py +0 -0
  35. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/chebi.py +0 -0
  36. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/chembl.py +0 -0
  37. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/chemidplus.py +0 -0
  38. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/civic.py +0 -0
  39. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/complexportal.py +0 -0
  40. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/daily.py +0 -0
  41. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/depmap.py +0 -0
  42. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/dgi.py +0 -0
  43. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/disgenet.py +0 -0
  44. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/drugbank.py +0 -0
  45. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/drugcentral.py +0 -0
  46. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/ensembl.py +0 -0
  47. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/expasy.py +0 -0
  48. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/flybase.py +0 -0
  49. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/guidetopharmacology.py +0 -0
  50. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/hgnc.py +0 -0
  51. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/homologene.py +0 -0
  52. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/icd10.py +0 -0
  53. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/icd11.py +0 -0
  54. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/icf.py +0 -0
  55. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/intact.py +0 -0
  56. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/interpro.py +0 -0
  57. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/itis.py +0 -0
  58. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/kegg.py +0 -0
  59. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/mesh.py +0 -0
  60. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/mgi.py +0 -0
  61. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/mirbase.py +0 -0
  62. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/moalmanac.py +0 -0
  63. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/msigdb.py +0 -0
  64. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/ncit.py +0 -0
  65. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/npass.py +0 -0
  66. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/obo.py +0 -0
  67. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/ols.py +0 -0
  68. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/omim.py +0 -0
  69. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/oncotree.py +0 -0
  70. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/pathbank.py +0 -0
  71. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/pathwaycommons.py +0 -0
  72. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/pfam.py +0 -0
  73. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/pombase.py +0 -0
  74. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/pr.py +0 -0
  75. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/pubchem.py +0 -0
  76. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/reactome.py +0 -0
  77. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/rfam.py +0 -0
  78. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/rgd.py +0 -0
  79. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/rhea.py +0 -0
  80. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/rxnorm.py +0 -0
  81. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/sgd.py +0 -0
  82. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/slm.py +0 -0
  83. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/stringdb.py +0 -0
  84. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/umls.py +0 -0
  85. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/uniprot.py +0 -0
  86. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/unversioned.py +0 -0
  87. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/wikipathways.py +0 -0
  88. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/sources/zfin.py +0 -0
  89. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/templates/base.html +0 -0
  90. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/templates/home.html +0 -0
  91. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/twitter_client.py +0 -0
  92. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/utils.py +0 -0
  93. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/wsgi.py +0 -0
  94. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions.egg-info/SOURCES.txt +0 -0
  95. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions.egg-info/dependency_links.txt +0 -0
  96. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions.egg-info/entry_points.txt +0 -0
  97. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions.egg-info/not-zip-safe +0 -0
  98. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions.egg-info/requires.txt +0 -0
  99. {bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions.egg-info/top_level.txt +0 -0
  100. {bioversions-0.5.435 → bioversions-0.5.436}/tests/test_bioversions.py +0 -0
{bioversions-0.5.435/src/bioversions.egg-info → bioversions-0.5.436}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: bioversions
3
- Version: 0.5.435
3
+ Version: 0.5.436
4
4
  Summary: What's the current version for each biological database?
5
5
  Home-page: https://github.com/biopragmatics/bioversions
6
6
  Download-URL: https://github.com/biopragmatics/bioversions/releases
{bioversions-0.5.435 → bioversions-0.5.436}/docs/_data/versions.yml RENAMED
@@ -1,7 +1,7 @@
1
1
  annotations:
2
2
  author: runner
3
- date: '2024-07-26'
4
- revision: 735
3
+ date: '2024-07-27'
4
+ revision: 736
5
5
  database:
6
6
  - name: A nomenclatural ontology for biological names
7
7
  prefix: nomen
@@ -4416,6 +4416,9 @@ database:
4416
4416
  - date: '2024-07-24'
4417
4417
  retrieved: '2024-07-26'
4418
4418
  version: July 24, 2024
4419
+ - date: '2024-07-25'
4420
+ retrieved: '2024-07-27'
4421
+ version: July 25, 2024
4419
4422
  vtype: date
4420
4423
  - name: 'OntoAvida: ontology for Avida digital evolution platform'
4421
4424
  prefix: ontoavida
@@ -9560,6 +9563,8 @@ database:
9560
9563
  version: '2024-07-23'
9561
9564
  - retrieved: '2024-07-26'
9562
9565
  version: '2024-07-24'
9566
+ - retrieved: '2024-07-27'
9567
+ version: '2024-07-25'
9563
9568
  vtype: date
9564
9569
  - name: Zebrafish Phenotype Ontology
9565
9570
  prefix: zp
{bioversions-0.5.435 → bioversions-0.5.436}/docs/failures.md RENAMED
@@ -3,4 +3,5 @@
3
3
  - issue parsing Drug Gene Interaction Database:
4
4
  - failed to resolve DisGeNet
5
5
  - failed to resolve Antibody Registry
6
+ - failed to resolve PathBank
6
7
  - failed to resolve SwissLipids
{bioversions-0.5.435 → bioversions-0.5.436}/docs/img/has_release_url.svg RENAMED
@@ -6,7 +6,7 @@
6
6
  <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
7
7
  <cc:Work>
8
8
  <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
9
- <dc:date>2024-07-26T00:54:03.805002</dc:date>
9
+ <dc:date>2024-07-27T00:54:08.265394</dc:date>
10
10
  <dc:format>image/svg+xml</dc:format>
11
11
  <dc:creator>
12
12
  <cc:Agent>
{bioversions-0.5.435 → bioversions-0.5.436}/docs/img/version_date_types.svg RENAMED
@@ -6,7 +6,7 @@
6
6
  <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
7
7
  <cc:Work>
8
8
  <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
9
- <dc:date>2024-07-26T00:54:03.749687</dc:date>
9
+ <dc:date>2024-07-27T00:54:08.212595</dc:date>
10
10
  <dc:format>image/svg+xml</dc:format>
11
11
  <dc:creator>
12
12
  <cc:Agent>
{bioversions-0.5.435 → bioversions-0.5.436}/docs/img/version_types.svg RENAMED
@@ -6,7 +6,7 @@
6
6
  <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
7
7
  <cc:Work>
8
8
  <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
9
- <dc:date>2024-07-26T00:54:03.666479</dc:date>
9
+ <dc:date>2024-07-27T00:54:08.131829</dc:date>
10
10
  <dc:format>image/svg+xml</dc:format>
11
11
  <dc:creator>
12
12
  <cc:Agent>
{bioversions-0.5.435 → bioversions-0.5.436}/setup.cfg RENAMED
@@ -1,6 +1,6 @@
1
1
  [metadata]
2
2
  name = bioversions
3
- version = 0.5.435
3
+ version = 0.5.436
4
4
  description = What's the current version for each biological database?
5
5
  long_description = file: README.md
6
6
  long_description_content_type = text/markdown
{bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/resources/versions.json RENAMED
@@ -1,7 +1,7 @@
1
1
  {
2
2
  "annotations": {
3
- "revision": 735,
4
- "date": "2024-07-26",
3
+ "revision": 736,
4
+ "date": "2024-07-27",
5
5
  "author": "runner"
6
6
  },
7
7
  "database": [
@@ -7983,6 +7983,11 @@
7983
7983
  "retrieved": "2024-07-26",
7984
7984
  "version": "July 24, 2024",
7985
7985
  "date": "2024-07-24"
7986
+ },
7987
+ {
7988
+ "retrieved": "2024-07-27",
7989
+ "version": "July 25, 2024",
7990
+ "date": "2024-07-25"
7986
7991
  }
7987
7992
  ],
7988
7993
  "name": "Online Mendelian Inheritance in Man",
@@ -17526,6 +17531,10 @@
17526
17531
  {
17527
17532
  "retrieved": "2024-07-26",
17528
17533
  "version": "2024-07-24"
17534
+ },
17535
+ {
17536
+ "retrieved": "2024-07-27",
17537
+ "version": "2024-07-25"
17529
17538
  }
17530
17539
  ],
17531
17540
  "name": "Zebrafish Information Network",
{bioversions-0.5.435 → bioversions-0.5.436}/src/bioversions/version.py RENAMED
@@ -9,7 +9,7 @@ __all__ = [
9
9
  "VERSION",
10
10
  ]
11
11
 
12
- VERSION = "0.5.435"
12
+ VERSION = "0.5.436"
13
13
 
14
14
 
15
15
  def get_git_hash() -> str:
{bioversions-0.5.435 → bioversions-0.5.436/src/bioversions.egg-info}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: bioversions
3
- Version: 0.5.435
3
+ Version: 0.5.436
4
4
  Summary: What's the current version for each biological database?
5
5
  Home-page: https://github.com/biopragmatics/bioversions
6
6
  Download-URL: https://github.com/biopragmatics/bioversions/releases
{bioversions-0.5.435 → bioversions-0.5.436}/LICENSE RENAMED
File without changes
{bioversions-0.5.435 → bioversions-0.5.436}/MANIFEST.in RENAMED
File without changes
{bioversions-0.5.435 → bioversions-0.5.436}/README.md RENAMED
File without changes