bioversions 0.5.433__tar.gz → 0.5.435__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (100) hide show
  1. {bioversions-0.5.433/src/bioversions.egg-info → bioversions-0.5.435}/PKG-INFO +1 -1
  2. {bioversions-0.5.433 → bioversions-0.5.435}/docs/_data/versions.yml +26 -2
  3. {bioversions-0.5.433 → bioversions-0.5.435}/docs/img/has_release_url.svg +1 -1
  4. {bioversions-0.5.433 → bioversions-0.5.435}/docs/img/version_date_types.svg +1 -1
  5. {bioversions-0.5.433 → bioversions-0.5.435}/docs/img/version_types.svg +1 -1
  6. {bioversions-0.5.433 → bioversions-0.5.435}/setup.cfg +1 -1
  7. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/resources/versions.json +44 -2
  8. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/version.py +1 -1
  9. {bioversions-0.5.433 → bioversions-0.5.435/src/bioversions.egg-info}/PKG-INFO +1 -1
  10. {bioversions-0.5.433 → bioversions-0.5.435}/LICENSE +0 -0
  11. {bioversions-0.5.433 → bioversions-0.5.435}/MANIFEST.in +0 -0
  12. {bioversions-0.5.433 → bioversions-0.5.435}/README.md +0 -0
  13. {bioversions-0.5.433 → bioversions-0.5.435}/docs/_config.yml +0 -0
  14. {bioversions-0.5.433 → bioversions-0.5.435}/docs/_includes/footer.html +0 -0
  15. {bioversions-0.5.433 → bioversions-0.5.435}/docs/_includes/head.html +0 -0
  16. {bioversions-0.5.433 → bioversions-0.5.435}/docs/download.md +0 -0
  17. {bioversions-0.5.433 → bioversions-0.5.435}/docs/failures.md +0 -0
  18. {bioversions-0.5.433 → bioversions-0.5.435}/docs/index.md +0 -0
  19. {bioversions-0.5.433 → bioversions-0.5.435}/docs/source/logo.png +0 -0
  20. {bioversions-0.5.433 → bioversions-0.5.435}/docs/summary.md +0 -0
  21. {bioversions-0.5.433 → bioversions-0.5.435}/pyproject.toml +0 -0
  22. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/__init__.py +0 -0
  23. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/__main__.py +0 -0
  24. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/charts.py +0 -0
  25. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/cli.py +0 -0
  26. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/py.typed +0 -0
  27. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/resources/__init__.py +0 -0
  28. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/resources/update.py +0 -0
  29. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/slack_client.py +0 -0
  30. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/__init__.py +0 -0
  31. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/antibodyregistry.py +0 -0
  32. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/bigg.py +0 -0
  33. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/biogrid.py +0 -0
  34. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/cellosaurus.py +0 -0
  35. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/chebi.py +0 -0
  36. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/chembl.py +0 -0
  37. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/chemidplus.py +0 -0
  38. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/civic.py +0 -0
  39. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/complexportal.py +0 -0
  40. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/daily.py +0 -0
  41. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/depmap.py +0 -0
  42. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/dgi.py +0 -0
  43. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/disgenet.py +0 -0
  44. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/drugbank.py +0 -0
  45. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/drugcentral.py +0 -0
  46. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/ensembl.py +0 -0
  47. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/expasy.py +0 -0
  48. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/flybase.py +0 -0
  49. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/guidetopharmacology.py +0 -0
  50. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/hgnc.py +0 -0
  51. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/homologene.py +0 -0
  52. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/icd10.py +0 -0
  53. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/icd11.py +0 -0
  54. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/icf.py +0 -0
  55. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/intact.py +0 -0
  56. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/interpro.py +0 -0
  57. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/itis.py +0 -0
  58. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/kegg.py +0 -0
  59. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/mesh.py +0 -0
  60. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/mgi.py +0 -0
  61. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/mirbase.py +0 -0
  62. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/moalmanac.py +0 -0
  63. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/msigdb.py +0 -0
  64. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/ncit.py +0 -0
  65. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/npass.py +0 -0
  66. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/obo.py +0 -0
  67. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/ols.py +0 -0
  68. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/omim.py +0 -0
  69. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/oncotree.py +0 -0
  70. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/pathbank.py +0 -0
  71. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/pathwaycommons.py +0 -0
  72. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/pfam.py +0 -0
  73. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/pombase.py +0 -0
  74. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/pr.py +0 -0
  75. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/pubchem.py +0 -0
  76. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/reactome.py +0 -0
  77. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/rfam.py +0 -0
  78. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/rgd.py +0 -0
  79. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/rhea.py +0 -0
  80. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/rxnorm.py +0 -0
  81. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/sgd.py +0 -0
  82. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/slm.py +0 -0
  83. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/stringdb.py +0 -0
  84. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/umls.py +0 -0
  85. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/uniprot.py +0 -0
  86. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/unversioned.py +0 -0
  87. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/wikipathways.py +0 -0
  88. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/sources/zfin.py +0 -0
  89. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/templates/base.html +0 -0
  90. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/templates/home.html +0 -0
  91. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/twitter_client.py +0 -0
  92. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/utils.py +0 -0
  93. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions/wsgi.py +0 -0
  94. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions.egg-info/SOURCES.txt +0 -0
  95. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions.egg-info/dependency_links.txt +0 -0
  96. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions.egg-info/entry_points.txt +0 -0
  97. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions.egg-info/not-zip-safe +0 -0
  98. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions.egg-info/requires.txt +0 -0
  99. {bioversions-0.5.433 → bioversions-0.5.435}/src/bioversions.egg-info/top_level.txt +0 -0
  100. {bioversions-0.5.433 → bioversions-0.5.435}/tests/test_bioversions.py +0 -0
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: bioversions
3
- Version: 0.5.433
3
+ Version: 0.5.435
4
4
  Summary: What's the current version for each biological database?
5
5
  Home-page: https://github.com/biopragmatics/bioversions
6
6
  Download-URL: https://github.com/biopragmatics/bioversions/releases
@@ -1,7 +1,7 @@
1
1
  annotations:
2
2
  author: runner
3
- date: '2024-07-16'
4
- revision: 733
3
+ date: '2024-07-26'
4
+ revision: 735
5
5
  database:
6
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  - name: A nomenclatural ontology for biological names
7
7
  prefix: nomen
@@ -1924,6 +1924,8 @@ database:
1924
1924
  version: '2024-03-27'
1925
1925
  - retrieved: '2024-05-30'
1926
1926
  version: '2024-05-29'
1927
+ - retrieved: '2024-07-25'
1928
+ version: '2024-07-24'
1927
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  vtype: date
1928
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  - name: Experimental condition ontology
1929
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  prefix: xco
@@ -3829,6 +3831,8 @@ database:
3829
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  version: '6.23'
3830
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  - retrieved: '2024-06-11'
3831
3833
  version: '6.13'
3834
+ - retrieved: '2024-07-25'
3835
+ version: '6.24'
3832
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  vtype: semver_minor
3833
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  - name: Mouse gross anatomy and development, timed
3834
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  prefix: emap
@@ -3970,6 +3974,9 @@ database:
3970
3974
  - date: '2024-05-28'
3971
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  retrieved: '2024-06-13'
3972
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  version: 24.05d
3977
+ - date: '2024-06-24'
3978
+ retrieved: '2024-07-25'
3979
+ version: 24.06d
3973
3980
  vtype: other
3974
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  - name: NCBI Gene
3975
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  prefix: ncbigene
@@ -4403,6 +4410,12 @@ database:
4403
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  - date: '2024-07-13'
4404
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  retrieved: '2024-07-15'
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  version: July 13, 2024
4413
+ - date: '2024-07-23'
4414
+ retrieved: '2024-07-25'
4415
+ version: July 23, 2024
4416
+ - date: '2024-07-24'
4417
+ retrieved: '2024-07-26'
4418
+ version: July 24, 2024
4406
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  vtype: date
4407
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  - name: 'OntoAvida: ontology for Avida digital evolution platform'
4408
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  prefix: ontoavida
@@ -5851,6 +5864,9 @@ database:
5851
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  - date: '2024-05-29'
5852
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  retrieved: '2024-05-30'
5853
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  version: '133'
5867
+ - date: '2024-07-24'
5868
+ retrieved: '2024-07-25'
5869
+ version: '134'
5854
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  vtype: date
5855
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  - name: Rice ontology
5856
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  prefix: co_320
@@ -7617,6 +7633,10 @@ database:
7617
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  homepage: ftp://ftp.uniprot.org/pub/databases/uniprot/previous_releases/release-2024_03/
7618
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  retrieved: '2024-05-30'
7619
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  version: '2024_03'
7636
+ - date: '2024-04-01'
7637
+ homepage: ftp://ftp.uniprot.org/pub/databases/uniprot/previous_releases/release-2024_04/
7638
+ retrieved: '2024-07-26'
7639
+ version: '2024_04'
7620
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  vtype: month
7621
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  - name: Unit Ontology
7622
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  prefix: uo
@@ -9536,6 +9556,10 @@ database:
9536
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  version: '2024-07-13'
9537
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  - retrieved: '2024-07-16'
9538
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  version: '2024-07-14'
9559
+ - retrieved: '2024-07-25'
9560
+ version: '2024-07-23'
9561
+ - retrieved: '2024-07-26'
9562
+ version: '2024-07-24'
9539
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  vtype: date
9540
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  - name: Zebrafish Phenotype Ontology
9541
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  prefix: zp
@@ -6,7 +6,7 @@
6
6
  <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
7
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  <cc:Work>
8
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  <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
9
- <dc:date>2024-07-16T00:55:05.560441</dc:date>
9
+ <dc:date>2024-07-26T00:54:03.805002</dc:date>
10
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  <dc:format>image/svg+xml</dc:format>
11
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  <dc:creator>
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  <cc:Agent>
@@ -6,7 +6,7 @@
6
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  <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
7
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  <cc:Work>
8
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  <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
9
- <dc:date>2024-07-16T00:55:05.506627</dc:date>
9
+ <dc:date>2024-07-26T00:54:03.749687</dc:date>
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  <dc:format>image/svg+xml</dc:format>
11
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  <dc:creator>
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  <cc:Agent>
@@ -6,7 +6,7 @@
6
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  <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
7
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  <cc:Work>
8
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  <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
9
- <dc:date>2024-07-16T00:55:05.425631</dc:date>
9
+ <dc:date>2024-07-26T00:54:03.666479</dc:date>
10
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  <dc:format>image/svg+xml</dc:format>
11
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  <dc:creator>
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  <cc:Agent>
@@ -1,6 +1,6 @@
1
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  [metadata]
2
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  name = bioversions
3
- version = 0.5.433
3
+ version = 0.5.435
4
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  description = What's the current version for each biological database?
5
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  long_description = file: README.md
6
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  long_description_content_type = text/markdown
@@ -1,7 +1,7 @@
1
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  {
2
2
  "annotations": {
3
- "revision": 733,
4
- "date": "2024-07-16",
3
+ "revision": 735,
4
+ "date": "2024-07-26",
5
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  "author": "runner"
6
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  },
7
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  "database": [
@@ -3499,6 +3499,10 @@
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  {
3500
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  "retrieved": "2024-05-30",
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  "version": "2024-05-29"
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+ },
3503
+ {
3504
+ "retrieved": "2024-07-25",
3505
+ "version": "2024-07-24"
3502
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  }
3503
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  ],
3504
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  "vtype": "date"
@@ -6959,6 +6963,10 @@
6959
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  {
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  "retrieved": "2024-06-11",
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  "version": "6.13"
6966
+ },
6967
+ {
6968
+ "retrieved": "2024-07-25",
6969
+ "version": "6.24"
6962
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  }
6963
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  ],
6964
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  "name": "Mouse Genome Database",
@@ -7198,6 +7206,11 @@
7198
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  "retrieved": "2024-06-13",
7199
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  "version": "24.05d",
7200
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  "date": "2024-05-28"
7209
+ },
7210
+ {
7211
+ "retrieved": "2024-07-25",
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+ "version": "24.06d",
7213
+ "date": "2024-06-24"
7201
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  }
7202
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  ],
7203
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  "name": "National Cancer Institute Thesaurus",
@@ -7960,6 +7973,16 @@
7960
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  "retrieved": "2024-07-15",
7961
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  "version": "July 13, 2024",
7962
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  "date": "2024-07-13"
7976
+ },
7977
+ {
7978
+ "retrieved": "2024-07-25",
7979
+ "version": "July 23, 2024",
7980
+ "date": "2024-07-23"
7981
+ },
7982
+ {
7983
+ "retrieved": "2024-07-26",
7984
+ "version": "July 24, 2024",
7985
+ "date": "2024-07-24"
7963
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  }
7964
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  ],
7965
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  "name": "Online Mendelian Inheritance in Man",
@@ -10606,6 +10629,11 @@
10606
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  "retrieved": "2024-05-30",
10607
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  "version": "133",
10608
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  "date": "2024-05-29"
10632
+ },
10633
+ {
10634
+ "retrieved": "2024-07-25",
10635
+ "version": "134",
10636
+ "date": "2024-07-24"
10609
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  }
10610
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  ],
10611
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  "vtype": "date"
@@ -14019,6 +14047,12 @@
14019
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  "version": "2024_03",
14020
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  "homepage": "ftp://ftp.uniprot.org/pub/databases/uniprot/previous_releases/release-2024_03/",
14021
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  "date": "2024-03-01"
14050
+ },
14051
+ {
14052
+ "retrieved": "2024-07-26",
14053
+ "version": "2024_04",
14054
+ "homepage": "ftp://ftp.uniprot.org/pub/databases/uniprot/previous_releases/release-2024_04/",
14055
+ "date": "2024-04-01"
14022
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  }
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  ],
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  "vtype": "month"
@@ -17484,6 +17518,14 @@
17484
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  {
17485
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  "retrieved": "2024-07-16",
17486
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  "version": "2024-07-14"
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+ },
17522
+ {
17523
+ "retrieved": "2024-07-25",
17524
+ "version": "2024-07-23"
17525
+ },
17526
+ {
17527
+ "retrieved": "2024-07-26",
17528
+ "version": "2024-07-24"
17487
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  }
17488
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  ],
17489
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  "name": "Zebrafish Information Network",
@@ -9,7 +9,7 @@ __all__ = [
9
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  "VERSION",
10
10
  ]
11
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12
- VERSION = "0.5.433"
12
+ VERSION = "0.5.435"
13
13
 
14
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15
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  def get_git_hash() -> str:
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: bioversions
3
- Version: 0.5.433
3
+ Version: 0.5.435
4
4
  Summary: What's the current version for each biological database?
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  Home-page: https://github.com/biopragmatics/bioversions
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  Download-URL: https://github.com/biopragmatics/bioversions/releases
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