bioversions 0.5.418__tar.gz → 0.5.420__tar.gz

{bioversions-0.5.418/src/bioversions.egg-info → bioversions-0.5.420}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: bioversions
-Version: 0.5.418
+Version: 0.5.420
 Summary: What's the current version for each biological database?
 Home-page: https://github.com/biopragmatics/bioversions
 Download-URL: https://github.com/biopragmatics/bioversions/releases

{bioversions-0.5.418 → bioversions-0.5.420}/docs/_data/versions.yml

@@ -1,7 +1,7 @@
 annotations:
   author: runner
-  date: '2024-07-01'
-  revision: 719
+  date: '2024-07-03'
+  revision: 721
 database:
 - name: A nomenclatural ontology for biological names
   prefix: nomen
@@ -339,6 +339,9 @@ database:
   - homepage: https://downloads.thebiogrid.org/BioGRID/Release-Archive/BIOGRID-4.4.234
     retrieved: '2024-06-02'
     version: 4.4.234
+  - homepage: https://downloads.thebiogrid.org/BioGRID/Release-Archive/BIOGRID-4.4.235
+    retrieved: '2024-07-02'
+    version: 4.4.235
   vtype: semver
 - name: Bioinformatics operations, data types, formats, identifiers and topics
   prefix: edam
@@ -774,6 +777,9 @@ database:
   - homepage: ftp://ftp.ebi.ac.uk/pub/databases/chebi/archive/rel234/
     retrieved: '2024-06-02'
     version: '234'
+  - homepage: ftp://ftp.ebi.ac.uk/pub/databases/chebi/archive/rel235/
+    retrieved: '2024-07-02'
+    version: '235'
   vtype: sequential
 - name: ChEBI Integrated Role Ontology
   prefix: chiro
@@ -895,6 +901,8 @@ database:
     version: 01-May-2024
   - retrieved: '2024-06-02'
     version: 01-Jun-2024
+  - retrieved: '2024-07-02'
+    version: 01-Jul-2024
   vtype: date
 - name: clinical LABoratory Ontology
   prefix: labo
@@ -3167,6 +3175,8 @@ database:
     version: 28-Feb-2024
   - retrieved: '2024-05-01'
     version: 26-Apr-2024
+  - retrieved: '2024-07-02'
+    version: 26-Jun-2024
   vtype: date
 - name: KEGG
   prefix: kegg.pathway
@@ -4356,6 +4366,9 @@ database:
   - date: '2024-06-29'
     retrieved: '2024-07-01'
     version: June 29, 2024
+  - date: '2024-07-01'
+    retrieved: '2024-07-03'
+    version: July 1, 2024
   vtype: date
 - name: 'OntoAvida: ontology for Avida digital evolution platform'
   prefix: ontoavida
@@ -5264,6 +5277,10 @@ database:
     homepage: https://www.pombase.org/data/releases/pombase-2024-06-01/
     retrieved: '2024-06-03'
     version: '2024-06-01'
+  - date: '2024-07-01'
+    homepage: https://www.pombase.org/data/releases/pombase-2024-07-01/
+    retrieved: '2024-07-02'
+    version: '2024-07-01'
   vtype: date
 - name: Population and Community Ontology
   prefix: pco
@@ -5904,6 +5921,9 @@ database:
   - homepage: https://download.nlm.nih.gov/umls/kss/rxnorm/RxNorm_full_06032024.zip
     retrieved: '2024-06-04'
     version: '2024-06-03'
+  - homepage: https://download.nlm.nih.gov/umls/kss/rxnorm/RxNorm_full_07012024.zip
+    retrieved: '2024-07-02'
+    version: '2024-07-01'
   vtype: date
 - name: Saccharomyces Genome Database
   prefix: sgd
@@ -9450,6 +9470,10 @@ database:
     version: '2024-06-28'
   - retrieved: '2024-07-01'
     version: '2024-06-29'
+  - retrieved: '2024-07-02'
+    version: '2024-06-30'
+  - retrieved: '2024-07-03'
+    version: '2024-07-01'
   vtype: date
 - name: Zebrafish Phenotype Ontology
   prefix: zp

{bioversions-0.5.418 → bioversions-0.5.420}/docs/failures.md

@@ -3,6 +3,5 @@
 - issue parsing Drug Gene Interaction Database: 
 - failed to resolve DisGeNet
 - failed to resolve Antibody Registry
-- failed to resolve National Cancer Institute Thesaurus
-- failed to resolve PathBank
+- failed to resolve NPASS
 - failed to resolve SwissLipids

{bioversions-0.5.418 → bioversions-0.5.420}/docs/img/has_release_url.svg

@@ -6,7 +6,7 @@
   <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
    <cc:Work>
     <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
-    <dc:date>2024-07-01T00:59:30.750067</dc:date>
+    <dc:date>2024-07-03T00:53:25.441621</dc:date>
     <dc:format>image/svg+xml</dc:format>
     <dc:creator>
      <cc:Agent>

{bioversions-0.5.418 → bioversions-0.5.420}/docs/img/version_date_types.svg

@@ -6,7 +6,7 @@
   <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
    <cc:Work>
     <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
-    <dc:date>2024-07-01T00:59:30.695757</dc:date>
+    <dc:date>2024-07-03T00:53:25.388197</dc:date>
     <dc:format>image/svg+xml</dc:format>
     <dc:creator>
      <cc:Agent>

{bioversions-0.5.418 → bioversions-0.5.420}/docs/img/version_types.svg

@@ -6,7 +6,7 @@
   <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
    <cc:Work>
     <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
-    <dc:date>2024-07-01T00:59:30.613128</dc:date>
+    <dc:date>2024-07-03T00:53:25.306578</dc:date>
     <dc:format>image/svg+xml</dc:format>
     <dc:creator>
      <cc:Agent>

{bioversions-0.5.418 → bioversions-0.5.420}/setup.cfg

@@ -1,6 +1,6 @@
 [metadata]
 name = bioversions
-version = 0.5.418
+version = 0.5.420
 description = What's the current version for each biological database?
 long_description = file: README.md
 long_description_content_type = text/markdown

{bioversions-0.5.418 → bioversions-0.5.420}/src/bioversions/resources/versions.json

@@ -1,7 +1,7 @@
 {
   "annotations": {
-    "revision": 719,
-    "date": "2024-07-01",
+    "revision": 721,
+    "date": "2024-07-03",
     "author": "runner"
   },
   "database": [
@@ -616,6 +616,11 @@
           "retrieved": "2024-06-02",
           "version": "4.4.234",
           "homepage": "https://downloads.thebiogrid.org/BioGRID/Release-Archive/BIOGRID-4.4.234"
+        },
+        {
+          "retrieved": "2024-07-02",
+          "version": "4.4.235",
+          "homepage": "https://downloads.thebiogrid.org/BioGRID/Release-Archive/BIOGRID-4.4.235"
         }
       ],
       "vtype": "semver"
@@ -1424,6 +1429,11 @@
           "retrieved": "2024-06-02",
           "version": "234",
           "homepage": "ftp://ftp.ebi.ac.uk/pub/databases/chebi/archive/rel234/"
+        },
+        {
+          "retrieved": "2024-07-02",
+          "version": "235",
+          "homepage": "ftp://ftp.ebi.ac.uk/pub/databases/chebi/archive/rel235/"
         }
       ],
       "vtype": "sequential"
@@ -1633,6 +1643,10 @@
         {
           "retrieved": "2024-06-02",
           "version": "01-Jun-2024"
+        },
+        {
+          "retrieved": "2024-07-02",
+          "version": "01-Jul-2024"
         }
       ],
       "name": "CiVIC",
@@ -5738,6 +5752,10 @@
         {
           "retrieved": "2024-05-01",
           "version": "26-Apr-2024"
+        },
+        {
+          "retrieved": "2024-07-02",
+          "version": "26-Jun-2024"
         }
       ],
       "name": "ITIS",
@@ -7881,6 +7899,11 @@
           "retrieved": "2024-07-01",
           "version": "June 29, 2024",
           "date": "2024-06-29"
+        },
+        {
+          "retrieved": "2024-07-03",
+          "version": "July 1, 2024",
+          "date": "2024-07-01"
         }
       ],
       "name": "Online Mendelian Inheritance in Man",
@@ -9525,6 +9548,12 @@
           "version": "2024-06-01",
           "homepage": "https://www.pombase.org/data/releases/pombase-2024-06-01/",
           "date": "2024-06-01"
+        },
+        {
+          "retrieved": "2024-07-02",
+          "version": "2024-07-01",
+          "homepage": "https://www.pombase.org/data/releases/pombase-2024-07-01/",
+          "date": "2024-07-01"
         }
       ],
       "name": "PomBase",
@@ -10697,6 +10726,11 @@
           "retrieved": "2024-06-04",
           "version": "2024-06-03",
           "homepage": "https://download.nlm.nih.gov/umls/kss/rxnorm/RxNorm_full_06032024.zip"
+        },
+        {
+          "retrieved": "2024-07-02",
+          "version": "2024-07-01",
+          "homepage": "https://download.nlm.nih.gov/umls/kss/rxnorm/RxNorm_full_07012024.zip"
         }
       ],
       "name": "RxNorm",
@@ -17332,6 +17366,14 @@
         {
           "retrieved": "2024-07-01",
           "version": "2024-06-29"
+        },
+        {
+          "retrieved": "2024-07-02",
+          "version": "2024-06-30"
+        },
+        {
+          "retrieved": "2024-07-03",
+          "version": "2024-07-01"
         }
       ],
       "name": "Zebrafish Information Network",

{bioversions-0.5.418 → bioversions-0.5.420}/src/bioversions/version.py

@@ -9,7 +9,7 @@ __all__ = [
     "VERSION",
 ]
 
-VERSION = "0.5.418"
+VERSION = "0.5.420"
 
 
 def get_git_hash() -> str:

{bioversions-0.5.418 → bioversions-0.5.420/src/bioversions.egg-info}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: bioversions
-Version: 0.5.418
+Version: 0.5.420
 Summary: What's the current version for each biological database?
 Home-page: https://github.com/biopragmatics/bioversions
 Download-URL: https://github.com/biopragmatics/bioversions/releases