PyPI - bioversions - Versions diffs - 0.5.418__tar.gz → 0.5.419__tar.gz - Mend

bioversions 0.5.418tar.gz → 0.5.419tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (100) hide show

{bioversions-0.5.418/src/bioversions.egg-info → bioversions-0.5.419}/PKG-INFO RENAMED Viewed

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: bioversions
-Version: 0.5.418
+Version: 0.5.419
 Summary: What's the current version for each biological database?
 Home-page: https://github.com/biopragmatics/bioversions
 Download-URL: https://github.com/biopragmatics/bioversions/releases

{bioversions-0.5.418 → bioversions-0.5.419}/docs/_data/versions.yml RENAMED Viewed

@@ -1,7 +1,7 @@
 annotations:
   author: runner
-  date: '2024-07-01'
-  revision: 719
+  date: '2024-07-02'
+  revision: 720
 database:
 - name: A nomenclatural ontology for biological names
   prefix: nomen
@@ -339,6 +339,9 @@ database:
   - homepage: https://downloads.thebiogrid.org/BioGRID/Release-Archive/BIOGRID-4.4.234
     retrieved: '2024-06-02'
     version: 4.4.234
+  - homepage: https://downloads.thebiogrid.org/BioGRID/Release-Archive/BIOGRID-4.4.235
+    retrieved: '2024-07-02'
+    version: 4.4.235
   vtype: semver
 - name: Bioinformatics operations, data types, formats, identifiers and topics
   prefix: edam
@@ -774,6 +777,9 @@ database:
   - homepage: ftp://ftp.ebi.ac.uk/pub/databases/chebi/archive/rel234/
     retrieved: '2024-06-02'
     version: '234'
+  - homepage: ftp://ftp.ebi.ac.uk/pub/databases/chebi/archive/rel235/
+    retrieved: '2024-07-02'
+    version: '235'
   vtype: sequential
 - name: ChEBI Integrated Role Ontology
   prefix: chiro
@@ -895,6 +901,8 @@ database:
     version: 01-May-2024
   - retrieved: '2024-06-02'
     version: 01-Jun-2024
+  - retrieved: '2024-07-02'
+    version: 01-Jul-2024
   vtype: date
 - name: clinical LABoratory Ontology
   prefix: labo
@@ -3167,6 +3175,8 @@ database:
     version: 28-Feb-2024
   - retrieved: '2024-05-01'
     version: 26-Apr-2024
+  - retrieved: '2024-07-02'
+    version: 26-Jun-2024
   vtype: date
 - name: KEGG
   prefix: kegg.pathway
@@ -5264,6 +5274,10 @@ database:
     homepage: https://www.pombase.org/data/releases/pombase-2024-06-01/
     retrieved: '2024-06-03'
     version: '2024-06-01'
+  - date: '2024-07-01'
+    homepage: https://www.pombase.org/data/releases/pombase-2024-07-01/
+    retrieved: '2024-07-02'
+    version: '2024-07-01'
   vtype: date
 - name: Population and Community Ontology
   prefix: pco
@@ -5904,6 +5918,9 @@ database:
   - homepage: https://download.nlm.nih.gov/umls/kss/rxnorm/RxNorm_full_06032024.zip
     retrieved: '2024-06-04'
     version: '2024-06-03'
+  - homepage: https://download.nlm.nih.gov/umls/kss/rxnorm/RxNorm_full_07012024.zip
+    retrieved: '2024-07-02'
+    version: '2024-07-01'
   vtype: date
 - name: Saccharomyces Genome Database
   prefix: sgd
@@ -9450,6 +9467,8 @@ database:
     version: '2024-06-28'
   - retrieved: '2024-07-01'
     version: '2024-06-29'
+  - retrieved: '2024-07-02'
+    version: '2024-06-30'
   vtype: date
 - name: Zebrafish Phenotype Ontology
   prefix: zp

{bioversions-0.5.418 → bioversions-0.5.419}/docs/failures.md RENAMED Viewed

@@ -3,6 +3,6 @@
 - issue parsing Drug Gene Interaction Database:
 - failed to resolve DisGeNet
 - failed to resolve Antibody Registry
-- failed to resolve National Cancer Institute Thesaurus
+- failed to resolve NPASS
 - failed to resolve PathBank
 - failed to resolve SwissLipids

{bioversions-0.5.418 → bioversions-0.5.419}/docs/img/has_release_url.svg RENAMED Viewed

@@ -6,7 +6,7 @@
   <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
    <cc:Work>
     <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
-    <dc:date>2024-07-01T00:59:30.750067</dc:date>
+    <dc:date>2024-07-02T00:53:32.938718</dc:date>
     <dc:format>image/svg+xml</dc:format>
     <dc:creator>
      <cc:Agent>

{bioversions-0.5.418 → bioversions-0.5.419}/docs/img/version_date_types.svg RENAMED Viewed

@@ -6,7 +6,7 @@
   <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
    <cc:Work>
     <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
-    <dc:date>2024-07-01T00:59:30.695757</dc:date>
+    <dc:date>2024-07-02T00:53:32.885801</dc:date>
     <dc:format>image/svg+xml</dc:format>
     <dc:creator>
      <cc:Agent>

{bioversions-0.5.418 → bioversions-0.5.419}/docs/img/version_types.svg RENAMED Viewed

@@ -6,7 +6,7 @@
   <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
    <cc:Work>
     <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
-    <dc:date>2024-07-01T00:59:30.613128</dc:date>
+    <dc:date>2024-07-02T00:53:32.803869</dc:date>
     <dc:format>image/svg+xml</dc:format>
     <dc:creator>
      <cc:Agent>

{bioversions-0.5.418 → bioversions-0.5.419}/setup.cfg RENAMED Viewed

@@ -1,6 +1,6 @@
 [metadata]
 name = bioversions
-version = 0.5.418
+version = 0.5.419
 description = What's the current version for each biological database?
 long_description = file: README.md
 long_description_content_type = text/markdown

{bioversions-0.5.418 → bioversions-0.5.419}/src/bioversions/resources/versions.json RENAMED Viewed

@@ -1,7 +1,7 @@
 {
   "annotations": {
-    "revision": 719,
-    "date": "2024-07-01",
+    "revision": 720,
+    "date": "2024-07-02",
     "author": "runner"
   },
   "database": [
@@ -616,6 +616,11 @@
           "retrieved": "2024-06-02",
           "version": "4.4.234",
           "homepage": "https://downloads.thebiogrid.org/BioGRID/Release-Archive/BIOGRID-4.4.234"
+        },
+        {
+          "retrieved": "2024-07-02",
+          "version": "4.4.235",
+          "homepage": "https://downloads.thebiogrid.org/BioGRID/Release-Archive/BIOGRID-4.4.235"
         }
       ],
       "vtype": "semver"
@@ -1424,6 +1429,11 @@
           "retrieved": "2024-06-02",
           "version": "234",
           "homepage": "ftp://ftp.ebi.ac.uk/pub/databases/chebi/archive/rel234/"
+        },
+        {
+          "retrieved": "2024-07-02",
+          "version": "235",
+          "homepage": "ftp://ftp.ebi.ac.uk/pub/databases/chebi/archive/rel235/"
         }
       ],
       "vtype": "sequential"
@@ -1633,6 +1643,10 @@
         {
           "retrieved": "2024-06-02",
           "version": "01-Jun-2024"
+        },
+        {
+          "retrieved": "2024-07-02",
+          "version": "01-Jul-2024"
         }
       ],
       "name": "CiVIC",
@@ -5738,6 +5752,10 @@
         {
           "retrieved": "2024-05-01",
           "version": "26-Apr-2024"
+        },
+        {
+          "retrieved": "2024-07-02",
+          "version": "26-Jun-2024"
         }
       ],
       "name": "ITIS",
@@ -9525,6 +9543,12 @@
           "version": "2024-06-01",
           "homepage": "https://www.pombase.org/data/releases/pombase-2024-06-01/",
           "date": "2024-06-01"
+        },
+        {
+          "retrieved": "2024-07-02",
+          "version": "2024-07-01",
+          "homepage": "https://www.pombase.org/data/releases/pombase-2024-07-01/",
+          "date": "2024-07-01"
         }
       ],
       "name": "PomBase",
@@ -10697,6 +10721,11 @@
           "retrieved": "2024-06-04",
           "version": "2024-06-03",
           "homepage": "https://download.nlm.nih.gov/umls/kss/rxnorm/RxNorm_full_06032024.zip"
+        },
+        {
+          "retrieved": "2024-07-02",
+          "version": "2024-07-01",
+          "homepage": "https://download.nlm.nih.gov/umls/kss/rxnorm/RxNorm_full_07012024.zip"
         }
       ],
       "name": "RxNorm",
@@ -17332,6 +17361,10 @@
         {
           "retrieved": "2024-07-01",
           "version": "2024-06-29"
+        },
+        {
+          "retrieved": "2024-07-02",
+          "version": "2024-06-30"
         }
       ],
       "name": "Zebrafish Information Network",

{bioversions-0.5.418 → bioversions-0.5.419}/src/bioversions/version.py RENAMED Viewed

@@ -9,7 +9,7 @@ __all__ = [
     "VERSION",
 ]
-VERSION = "0.5.418"
+VERSION = "0.5.419"
 def get_git_hash() -> str:

{bioversions-0.5.418 → bioversions-0.5.419/src/bioversions.egg-info}/PKG-INFO RENAMED Viewed

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: bioversions
-Version: 0.5.418
+Version: 0.5.419
 Summary: What's the current version for each biological database?
 Home-page: https://github.com/biopragmatics/bioversions
 Download-URL: https://github.com/biopragmatics/bioversions/releases