bioversions 0.5.381__tar.gz → 0.5.382__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (101) hide show
  1. {bioversions-0.5.381/src/bioversions.egg-info → bioversions-0.5.382}/PKG-INFO +1 -1
  2. {bioversions-0.5.381 → bioversions-0.5.382}/docs/_data/versions.yml +9 -2
  3. bioversions-0.5.382/docs/failures.md +5 -0
  4. {bioversions-0.5.381 → bioversions-0.5.382}/docs/img/has_release_url.svg +1 -1
  5. {bioversions-0.5.381 → bioversions-0.5.382}/docs/img/version_date_types.svg +1 -1
  6. {bioversions-0.5.381 → bioversions-0.5.382}/docs/img/version_types.svg +1 -1
  7. {bioversions-0.5.381 → bioversions-0.5.382}/setup.cfg +1 -1
  8. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/resources/versions.json +15 -2
  9. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/version.py +1 -1
  10. {bioversions-0.5.381 → bioversions-0.5.382/src/bioversions.egg-info}/PKG-INFO +1 -1
  11. bioversions-0.5.381/docs/failures.md +0 -6
  12. {bioversions-0.5.381 → bioversions-0.5.382}/LICENSE +0 -0
  13. {bioversions-0.5.381 → bioversions-0.5.382}/MANIFEST.in +0 -0
  14. {bioversions-0.5.381 → bioversions-0.5.382}/README.md +0 -0
  15. {bioversions-0.5.381 → bioversions-0.5.382}/docs/_config.yml +0 -0
  16. {bioversions-0.5.381 → bioversions-0.5.382}/docs/_includes/footer.html +0 -0
  17. {bioversions-0.5.381 → bioversions-0.5.382}/docs/_includes/head.html +0 -0
  18. {bioversions-0.5.381 → bioversions-0.5.382}/docs/download.md +0 -0
  19. {bioversions-0.5.381 → bioversions-0.5.382}/docs/index.md +0 -0
  20. {bioversions-0.5.381 → bioversions-0.5.382}/docs/source/logo.png +0 -0
  21. {bioversions-0.5.381 → bioversions-0.5.382}/docs/summary.md +0 -0
  22. {bioversions-0.5.381 → bioversions-0.5.382}/pyproject.toml +0 -0
  23. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/__init__.py +0 -0
  24. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/__main__.py +0 -0
  25. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/charts.py +0 -0
  26. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/cli.py +0 -0
  27. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/py.typed +0 -0
  28. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/resources/__init__.py +0 -0
  29. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/resources/update.py +0 -0
  30. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/slack_client.py +0 -0
  31. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/__init__.py +0 -0
  32. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/antibodyregistry.py +0 -0
  33. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/bigg.py +0 -0
  34. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/biogrid.py +0 -0
  35. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/cellosaurus.py +0 -0
  36. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/chebi.py +0 -0
  37. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/chembl.py +0 -0
  38. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/chemidplus.py +0 -0
  39. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/civic.py +0 -0
  40. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/complexportal.py +0 -0
  41. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/daily.py +0 -0
  42. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/depmap.py +0 -0
  43. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/dgi.py +0 -0
  44. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/disgenet.py +0 -0
  45. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/drugbank.py +0 -0
  46. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/drugcentral.py +0 -0
  47. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/ensembl.py +0 -0
  48. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/expasy.py +0 -0
  49. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/flybase.py +0 -0
  50. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/guidetopharmacology.py +0 -0
  51. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/hgnc.py +0 -0
  52. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/homologene.py +0 -0
  53. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/icd10.py +0 -0
  54. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/icd11.py +0 -0
  55. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/icf.py +0 -0
  56. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/intact.py +0 -0
  57. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/interpro.py +0 -0
  58. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/itis.py +0 -0
  59. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/kegg.py +0 -0
  60. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/mesh.py +0 -0
  61. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/mgi.py +0 -0
  62. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/mirbase.py +0 -0
  63. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/moalmanac.py +0 -0
  64. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/msigdb.py +0 -0
  65. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/ncit.py +0 -0
  66. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/npass.py +0 -0
  67. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/obo.py +0 -0
  68. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/ols.py +0 -0
  69. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/omim.py +0 -0
  70. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/oncotree.py +0 -0
  71. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/pathbank.py +0 -0
  72. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/pathwaycommons.py +0 -0
  73. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/pfam.py +0 -0
  74. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/pombase.py +0 -0
  75. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/pr.py +0 -0
  76. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/pubchem.py +0 -0
  77. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/reactome.py +0 -0
  78. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/rfam.py +0 -0
  79. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/rgd.py +0 -0
  80. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/rhea.py +0 -0
  81. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/rxnorm.py +0 -0
  82. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/sgd.py +0 -0
  83. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/slm.py +0 -0
  84. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/stringdb.py +0 -0
  85. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/umls.py +0 -0
  86. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/uniprot.py +0 -0
  87. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/unversioned.py +0 -0
  88. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/wikipathways.py +0 -0
  89. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/sources/zfin.py +0 -0
  90. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/templates/base.html +0 -0
  91. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/templates/home.html +0 -0
  92. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/twitter_client.py +0 -0
  93. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/utils.py +0 -0
  94. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions/wsgi.py +0 -0
  95. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions.egg-info/SOURCES.txt +0 -0
  96. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions.egg-info/dependency_links.txt +0 -0
  97. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions.egg-info/entry_points.txt +0 -0
  98. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions.egg-info/not-zip-safe +0 -0
  99. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions.egg-info/requires.txt +0 -0
  100. {bioversions-0.5.381 → bioversions-0.5.382}/src/bioversions.egg-info/top_level.txt +0 -0
  101. {bioversions-0.5.381 → bioversions-0.5.382}/tests/test_bioversions.py +0 -0
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: bioversions
3
- Version: 0.5.381
3
+ Version: 0.5.382
4
4
  Summary: What's the current version for each biological database?
5
5
  Home-page: https://github.com/biopragmatics/bioversions
6
6
  Download-URL: https://github.com/biopragmatics/bioversions/releases
@@ -1,7 +1,7 @@
1
1
  annotations:
2
2
  author: runner
3
- date: '2024-05-23'
4
- revision: 682
3
+ date: '2024-05-24'
4
+ revision: 683
5
5
  database:
6
6
  - name: A nomenclatural ontology for biological names
7
7
  prefix: nomen
@@ -4157,6 +4157,9 @@ database:
4157
4157
  - date: '2024-05-21'
4158
4158
  retrieved: '2024-05-23'
4159
4159
  version: May 21, 2024
4160
+ - date: '2024-05-22'
4161
+ retrieved: '2024-05-24'
4162
+ version: May 22, 2024
4160
4163
  vtype: date
4161
4164
  - name: 'OntoAvida: ontology for Avida digital evolution platform'
4162
4165
  prefix: ontoavida
@@ -6852,6 +6855,8 @@ database:
6852
6855
  version: '2024-05-22'
6853
6856
  - retrieved: '2024-05-23'
6854
6857
  version: '2024-05-23'
6858
+ - retrieved: '2024-05-24'
6859
+ version: '2024-05-24'
6855
6860
  vtype: date
6856
6861
  - name: SWO (The Software Ontology)
6857
6862
  prefix: swo
@@ -9075,6 +9080,8 @@ database:
9075
9080
  version: '2024-05-20'
9076
9081
  - retrieved: '2024-05-23'
9077
9082
  version: '2024-05-21'
9083
+ - retrieved: '2024-05-24'
9084
+ version: '2024-05-22'
9078
9085
  vtype: date
9079
9086
  - name: Zebrafish Phenotype Ontology
9080
9087
  prefix: zp
@@ -0,0 +1,5 @@
1
+ # Errors
2
+
3
+ - issue parsing Drug Gene Interaction Database:
4
+ - failed to resolve DisGeNet
5
+ - failed to resolve Antibody Registry
@@ -6,7 +6,7 @@
6
6
  <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
7
7
  <cc:Work>
8
8
  <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
9
- <dc:date>2024-05-23T00:50:24.754181</dc:date>
9
+ <dc:date>2024-05-24T00:50:32.781631</dc:date>
10
10
  <dc:format>image/svg+xml</dc:format>
11
11
  <dc:creator>
12
12
  <cc:Agent>
@@ -6,7 +6,7 @@
6
6
  <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
7
7
  <cc:Work>
8
8
  <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
9
- <dc:date>2024-05-23T00:50:24.683148</dc:date>
9
+ <dc:date>2024-05-24T00:50:32.710721</dc:date>
10
10
  <dc:format>image/svg+xml</dc:format>
11
11
  <dc:creator>
12
12
  <cc:Agent>
@@ -6,7 +6,7 @@
6
6
  <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
7
7
  <cc:Work>
8
8
  <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
9
- <dc:date>2024-05-23T00:50:24.574049</dc:date>
9
+ <dc:date>2024-05-24T00:50:32.602871</dc:date>
10
10
  <dc:format>image/svg+xml</dc:format>
11
11
  <dc:creator>
12
12
  <cc:Agent>
@@ -1,6 +1,6 @@
1
1
  [metadata]
2
2
  name = bioversions
3
- version = 0.5.381
3
+ version = 0.5.382
4
4
  description = What's the current version for each biological database?
5
5
  long_description = file: README.md
6
6
  long_description_content_type = text/markdown
@@ -1,7 +1,7 @@
1
1
  {
2
2
  "annotations": {
3
- "revision": 682,
4
- "date": "2024-05-23",
3
+ "revision": 683,
4
+ "date": "2024-05-24",
5
5
  "author": "runner"
6
6
  },
7
7
  "database": [
@@ -7532,6 +7532,11 @@
7532
7532
  "retrieved": "2024-05-23",
7533
7533
  "version": "May 21, 2024",
7534
7534
  "date": "2024-05-21"
7535
+ },
7536
+ {
7537
+ "retrieved": "2024-05-24",
7538
+ "version": "May 22, 2024",
7539
+ "date": "2024-05-22"
7535
7540
  }
7536
7541
  ],
7537
7542
  "name": "Online Mendelian Inheritance in Man",
@@ -12627,6 +12632,10 @@
12627
12632
  {
12628
12633
  "retrieved": "2024-05-23",
12629
12634
  "version": "2024-05-23"
12635
+ },
12636
+ {
12637
+ "retrieved": "2024-05-24",
12638
+ "version": "2024-05-24"
12630
12639
  }
12631
12640
  ],
12632
12641
  "name": "SwissLipids",
@@ -16641,6 +16650,10 @@
16641
16650
  {
16642
16651
  "retrieved": "2024-05-23",
16643
16652
  "version": "2024-05-21"
16653
+ },
16654
+ {
16655
+ "retrieved": "2024-05-24",
16656
+ "version": "2024-05-22"
16644
16657
  }
16645
16658
  ],
16646
16659
  "name": "Zebrafish Information Network",
@@ -9,7 +9,7 @@ __all__ = [
9
9
  "VERSION",
10
10
  ]
11
11
 
12
- VERSION = "0.5.381"
12
+ VERSION = "0.5.382"
13
13
 
14
14
 
15
15
  def get_git_hash() -> str:
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: bioversions
3
- Version: 0.5.381
3
+ Version: 0.5.382
4
4
  Summary: What's the current version for each biological database?
5
5
  Home-page: https://github.com/biopragmatics/bioversions
6
6
  Download-URL: https://github.com/biopragmatics/bioversions/releases
@@ -1,6 +0,0 @@
1
- # Errors
2
-
3
- - issue parsing Drug Gene Interaction Database:
4
- - failed to resolve DisGeNet
5
- - failed to resolve Antibody Registry
6
- - failed to resolve National Cancer Institute Thesaurus
File without changes
File without changes
File without changes