bioversions 0.5.380__tar.gz → 0.5.381__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (101) hide show
  1. {bioversions-0.5.380/src/bioversions.egg-info → bioversions-0.5.381}/PKG-INFO +1 -1
  2. {bioversions-0.5.380 → bioversions-0.5.381}/docs/_data/versions.yml +9 -2
  3. bioversions-0.5.381/docs/failures.md +6 -0
  4. {bioversions-0.5.380 → bioversions-0.5.381}/docs/img/has_release_url.svg +1 -1
  5. {bioversions-0.5.380 → bioversions-0.5.381}/docs/img/version_date_types.svg +1 -1
  6. {bioversions-0.5.380 → bioversions-0.5.381}/docs/img/version_types.svg +1 -1
  7. {bioversions-0.5.380 → bioversions-0.5.381}/setup.cfg +1 -1
  8. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/resources/versions.json +15 -2
  9. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/version.py +1 -1
  10. {bioversions-0.5.380 → bioversions-0.5.381/src/bioversions.egg-info}/PKG-INFO +1 -1
  11. bioversions-0.5.380/docs/failures.md +0 -5
  12. {bioversions-0.5.380 → bioversions-0.5.381}/LICENSE +0 -0
  13. {bioversions-0.5.380 → bioversions-0.5.381}/MANIFEST.in +0 -0
  14. {bioversions-0.5.380 → bioversions-0.5.381}/README.md +0 -0
  15. {bioversions-0.5.380 → bioversions-0.5.381}/docs/_config.yml +0 -0
  16. {bioversions-0.5.380 → bioversions-0.5.381}/docs/_includes/footer.html +0 -0
  17. {bioversions-0.5.380 → bioversions-0.5.381}/docs/_includes/head.html +0 -0
  18. {bioversions-0.5.380 → bioversions-0.5.381}/docs/download.md +0 -0
  19. {bioversions-0.5.380 → bioversions-0.5.381}/docs/index.md +0 -0
  20. {bioversions-0.5.380 → bioversions-0.5.381}/docs/source/logo.png +0 -0
  21. {bioversions-0.5.380 → bioversions-0.5.381}/docs/summary.md +0 -0
  22. {bioversions-0.5.380 → bioversions-0.5.381}/pyproject.toml +0 -0
  23. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/__init__.py +0 -0
  24. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/__main__.py +0 -0
  25. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/charts.py +0 -0
  26. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/cli.py +0 -0
  27. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/py.typed +0 -0
  28. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/resources/__init__.py +0 -0
  29. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/resources/update.py +0 -0
  30. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/slack_client.py +0 -0
  31. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/__init__.py +0 -0
  32. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/antibodyregistry.py +0 -0
  33. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/bigg.py +0 -0
  34. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/biogrid.py +0 -0
  35. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/cellosaurus.py +0 -0
  36. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/chebi.py +0 -0
  37. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/chembl.py +0 -0
  38. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/chemidplus.py +0 -0
  39. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/civic.py +0 -0
  40. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/complexportal.py +0 -0
  41. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/daily.py +0 -0
  42. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/depmap.py +0 -0
  43. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/dgi.py +0 -0
  44. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/disgenet.py +0 -0
  45. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/drugbank.py +0 -0
  46. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/drugcentral.py +0 -0
  47. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/ensembl.py +0 -0
  48. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/expasy.py +0 -0
  49. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/flybase.py +0 -0
  50. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/guidetopharmacology.py +0 -0
  51. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/hgnc.py +0 -0
  52. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/homologene.py +0 -0
  53. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/icd10.py +0 -0
  54. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/icd11.py +0 -0
  55. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/icf.py +0 -0
  56. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/intact.py +0 -0
  57. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/interpro.py +0 -0
  58. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/itis.py +0 -0
  59. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/kegg.py +0 -0
  60. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/mesh.py +0 -0
  61. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/mgi.py +0 -0
  62. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/mirbase.py +0 -0
  63. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/moalmanac.py +0 -0
  64. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/msigdb.py +0 -0
  65. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/ncit.py +0 -0
  66. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/npass.py +0 -0
  67. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/obo.py +0 -0
  68. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/ols.py +0 -0
  69. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/omim.py +0 -0
  70. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/oncotree.py +0 -0
  71. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/pathbank.py +0 -0
  72. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/pathwaycommons.py +0 -0
  73. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/pfam.py +0 -0
  74. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/pombase.py +0 -0
  75. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/pr.py +0 -0
  76. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/pubchem.py +0 -0
  77. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/reactome.py +0 -0
  78. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/rfam.py +0 -0
  79. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/rgd.py +0 -0
  80. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/rhea.py +0 -0
  81. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/rxnorm.py +0 -0
  82. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/sgd.py +0 -0
  83. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/slm.py +0 -0
  84. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/stringdb.py +0 -0
  85. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/umls.py +0 -0
  86. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/uniprot.py +0 -0
  87. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/unversioned.py +0 -0
  88. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/wikipathways.py +0 -0
  89. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/sources/zfin.py +0 -0
  90. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/templates/base.html +0 -0
  91. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/templates/home.html +0 -0
  92. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/twitter_client.py +0 -0
  93. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/utils.py +0 -0
  94. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions/wsgi.py +0 -0
  95. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions.egg-info/SOURCES.txt +0 -0
  96. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions.egg-info/dependency_links.txt +0 -0
  97. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions.egg-info/entry_points.txt +0 -0
  98. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions.egg-info/not-zip-safe +0 -0
  99. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions.egg-info/requires.txt +0 -0
  100. {bioversions-0.5.380 → bioversions-0.5.381}/src/bioversions.egg-info/top_level.txt +0 -0
  101. {bioversions-0.5.380 → bioversions-0.5.381}/tests/test_bioversions.py +0 -0
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: bioversions
3
- Version: 0.5.380
3
+ Version: 0.5.381
4
4
  Summary: What's the current version for each biological database?
5
5
  Home-page: https://github.com/biopragmatics/bioversions
6
6
  Download-URL: https://github.com/biopragmatics/bioversions/releases
@@ -1,7 +1,7 @@
1
1
  annotations:
2
2
  author: runner
3
- date: '2024-05-22'
4
- revision: 681
3
+ date: '2024-05-23'
4
+ revision: 682
5
5
  database:
6
6
  - name: A nomenclatural ontology for biological names
7
7
  prefix: nomen
@@ -4154,6 +4154,9 @@ database:
4154
4154
  - date: '2024-05-20'
4155
4155
  retrieved: '2024-05-22'
4156
4156
  version: May 20, 2024
4157
+ - date: '2024-05-21'
4158
+ retrieved: '2024-05-23'
4159
+ version: May 21, 2024
4157
4160
  vtype: date
4158
4161
  - name: 'OntoAvida: ontology for Avida digital evolution platform'
4159
4162
  prefix: ontoavida
@@ -6847,6 +6850,8 @@ database:
6847
6850
  version: '2024-05-21'
6848
6851
  - retrieved: '2024-05-22'
6849
6852
  version: '2024-05-22'
6853
+ - retrieved: '2024-05-23'
6854
+ version: '2024-05-23'
6850
6855
  vtype: date
6851
6856
  - name: SWO (The Software Ontology)
6852
6857
  prefix: swo
@@ -9068,6 +9073,8 @@ database:
9068
9073
  version: '2024-05-19'
9069
9074
  - retrieved: '2024-05-22'
9070
9075
  version: '2024-05-20'
9076
+ - retrieved: '2024-05-23'
9077
+ version: '2024-05-21'
9071
9078
  vtype: date
9072
9079
  - name: Zebrafish Phenotype Ontology
9073
9080
  prefix: zp
@@ -0,0 +1,6 @@
1
+ # Errors
2
+
3
+ - issue parsing Drug Gene Interaction Database:
4
+ - failed to resolve DisGeNet
5
+ - failed to resolve Antibody Registry
6
+ - failed to resolve National Cancer Institute Thesaurus
@@ -6,7 +6,7 @@
6
6
  <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
7
7
  <cc:Work>
8
8
  <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
9
- <dc:date>2024-05-22T00:50:50.257712</dc:date>
9
+ <dc:date>2024-05-23T00:50:24.754181</dc:date>
10
10
  <dc:format>image/svg+xml</dc:format>
11
11
  <dc:creator>
12
12
  <cc:Agent>
@@ -6,7 +6,7 @@
6
6
  <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
7
7
  <cc:Work>
8
8
  <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
9
- <dc:date>2024-05-22T00:50:50.185966</dc:date>
9
+ <dc:date>2024-05-23T00:50:24.683148</dc:date>
10
10
  <dc:format>image/svg+xml</dc:format>
11
11
  <dc:creator>
12
12
  <cc:Agent>
@@ -6,7 +6,7 @@
6
6
  <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
7
7
  <cc:Work>
8
8
  <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
9
- <dc:date>2024-05-22T00:50:50.078092</dc:date>
9
+ <dc:date>2024-05-23T00:50:24.574049</dc:date>
10
10
  <dc:format>image/svg+xml</dc:format>
11
11
  <dc:creator>
12
12
  <cc:Agent>
@@ -1,6 +1,6 @@
1
1
  [metadata]
2
2
  name = bioversions
3
- version = 0.5.380
3
+ version = 0.5.381
4
4
  description = What's the current version for each biological database?
5
5
  long_description = file: README.md
6
6
  long_description_content_type = text/markdown
@@ -1,7 +1,7 @@
1
1
  {
2
2
  "annotations": {
3
- "revision": 681,
4
- "date": "2024-05-22",
3
+ "revision": 682,
4
+ "date": "2024-05-23",
5
5
  "author": "runner"
6
6
  },
7
7
  "database": [
@@ -7527,6 +7527,11 @@
7527
7527
  "retrieved": "2024-05-22",
7528
7528
  "version": "May 20, 2024",
7529
7529
  "date": "2024-05-20"
7530
+ },
7531
+ {
7532
+ "retrieved": "2024-05-23",
7533
+ "version": "May 21, 2024",
7534
+ "date": "2024-05-21"
7530
7535
  }
7531
7536
  ],
7532
7537
  "name": "Online Mendelian Inheritance in Man",
@@ -12618,6 +12623,10 @@
12618
12623
  {
12619
12624
  "retrieved": "2024-05-22",
12620
12625
  "version": "2024-05-22"
12626
+ },
12627
+ {
12628
+ "retrieved": "2024-05-23",
12629
+ "version": "2024-05-23"
12621
12630
  }
12622
12631
  ],
12623
12632
  "name": "SwissLipids",
@@ -16628,6 +16637,10 @@
16628
16637
  {
16629
16638
  "retrieved": "2024-05-22",
16630
16639
  "version": "2024-05-20"
16640
+ },
16641
+ {
16642
+ "retrieved": "2024-05-23",
16643
+ "version": "2024-05-21"
16631
16644
  }
16632
16645
  ],
16633
16646
  "name": "Zebrafish Information Network",
@@ -9,7 +9,7 @@ __all__ = [
9
9
  "VERSION",
10
10
  ]
11
11
 
12
- VERSION = "0.5.380"
12
+ VERSION = "0.5.381"
13
13
 
14
14
 
15
15
  def get_git_hash() -> str:
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: bioversions
3
- Version: 0.5.380
3
+ Version: 0.5.381
4
4
  Summary: What's the current version for each biological database?
5
5
  Home-page: https://github.com/biopragmatics/bioversions
6
6
  Download-URL: https://github.com/biopragmatics/bioversions/releases
@@ -1,5 +0,0 @@
1
- # Errors
2
-
3
- - issue parsing Drug Gene Interaction Database:
4
- - failed to resolve DisGeNet
5
- - failed to resolve Antibody Registry
File without changes
File without changes
File without changes