bioversions 0.5.360__tar.gz → 0.5.362__tar.gz

{bioversions-0.5.360/src/bioversions.egg-info → bioversions-0.5.362}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: bioversions
-Version: 0.5.360
+Version: 0.5.362
 Summary: What's the current version for each biological database?
 Home-page: https://github.com/biopragmatics/bioversions
 Download-URL: https://github.com/biopragmatics/bioversions/releases

{bioversions-0.5.360 → bioversions-0.5.362}/docs/_data/versions.yml

@@ -1,7 +1,7 @@
 annotations:
   author: runner
-  date: '2024-05-02'
-  revision: 661
+  date: '2024-05-04'
+  revision: 663
 database:
 - name: A nomenclatural ontology for biological names
   prefix: nomen
@@ -652,6 +652,9 @@ database:
   - date: '2024-01-30'
     retrieved: '2024-03-25'
     version: '48.0'
+  - date: '2024-05-02'
+    retrieved: '2024-05-03'
+    version: '49.0'
   vtype: sequential
 - name: Cellular Microscopy Phenotype Ontology
   prefix: cmpo
@@ -4068,6 +4071,12 @@ database:
   - date: '2024-04-30'
     retrieved: '2024-05-02'
     version: April 30, 2024
+  - date: '2024-05-01'
+    retrieved: '2024-05-03'
+    version: May 1, 2024
+  - date: '2024-05-02'
+    retrieved: '2024-05-04'
+    version: May 2, 2024
   vtype: date
 - name: 'OntoAvida: ontology for Avida digital evolution platform'
   prefix: ontoavida
@@ -6698,6 +6707,10 @@ database:
     version: '2024-05-01'
   - retrieved: '2024-05-02'
     version: '2024-05-02'
+  - retrieved: '2024-05-03'
+    version: '2024-05-03'
+  - retrieved: '2024-05-04'
+    version: '2024-05-04'
   vtype: date
 - name: SWO (The Software Ontology)
   prefix: swo
@@ -8867,6 +8880,10 @@ database:
     version: '2024-04-29'
   - retrieved: '2024-05-02'
     version: '2024-04-30'
+  - retrieved: '2024-05-03'
+    version: '2024-05-01'
+  - retrieved: '2024-05-04'
+    version: '2024-05-02'
   vtype: date
 - name: Zebrafish Phenotype Ontology
   prefix: zp

{bioversions-0.5.360 → bioversions-0.5.362}/docs/img/has_release_url.svg

@@ -6,7 +6,7 @@
   <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
    <cc:Work>
     <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
-    <dc:date>2024-05-02T00:48:04.615870</dc:date>
+    <dc:date>2024-05-04T00:47:58.056247</dc:date>
     <dc:format>image/svg+xml</dc:format>
     <dc:creator>
      <cc:Agent>

{bioversions-0.5.360 → bioversions-0.5.362}/docs/img/version_date_types.svg

@@ -6,7 +6,7 @@
   <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
    <cc:Work>
     <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
-    <dc:date>2024-05-02T00:48:04.544307</dc:date>
+    <dc:date>2024-05-04T00:47:57.986649</dc:date>
     <dc:format>image/svg+xml</dc:format>
     <dc:creator>
      <cc:Agent>

{bioversions-0.5.360 → bioversions-0.5.362}/docs/img/version_types.svg

@@ -6,7 +6,7 @@
   <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
    <cc:Work>
     <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
-    <dc:date>2024-05-02T00:48:04.436026</dc:date>
+    <dc:date>2024-05-04T00:47:57.879967</dc:date>
     <dc:format>image/svg+xml</dc:format>
     <dc:creator>
      <cc:Agent>

{bioversions-0.5.360 → bioversions-0.5.362}/setup.cfg

@@ -1,6 +1,6 @@
 [metadata]
 name = bioversions
-version = 0.5.360
+version = 0.5.362
 description = What's the current version for each biological database?
 long_description = file: README.md
 long_description_content_type = text/markdown

{bioversions-0.5.360 → bioversions-0.5.362}/src/bioversions/resources/versions.json

@@ -1,7 +1,7 @@
 {
   "annotations": {
-    "revision": 661,
-    "date": "2024-05-02",
+    "revision": 663,
+    "date": "2024-05-04",
     "author": "runner"
   },
   "database": [
@@ -1213,6 +1213,11 @@
           "retrieved": "2024-03-25",
           "version": "48.0",
           "date": "2024-01-30"
+        },
+        {
+          "retrieved": "2024-05-03",
+          "version": "49.0",
+          "date": "2024-05-02"
         }
       ],
       "name": "Cellosaurus",
@@ -7373,6 +7378,16 @@
           "retrieved": "2024-05-02",
           "version": "April 30, 2024",
           "date": "2024-04-30"
+        },
+        {
+          "retrieved": "2024-05-03",
+          "version": "May 1, 2024",
+          "date": "2024-05-01"
+        },
+        {
+          "retrieved": "2024-05-04",
+          "version": "May 2, 2024",
+          "date": "2024-05-02"
         }
       ],
       "name": "Online Mendelian Inheritance in Man",
@@ -12339,6 +12354,14 @@
         {
           "retrieved": "2024-05-02",
           "version": "2024-05-02"
+        },
+        {
+          "retrieved": "2024-05-03",
+          "version": "2024-05-03"
+        },
+        {
+          "retrieved": "2024-05-04",
+          "version": "2024-05-04"
         }
       ],
       "name": "SwissLipids",
@@ -16247,6 +16270,14 @@
         {
           "retrieved": "2024-05-02",
           "version": "2024-04-30"
+        },
+        {
+          "retrieved": "2024-05-03",
+          "version": "2024-05-01"
+        },
+        {
+          "retrieved": "2024-05-04",
+          "version": "2024-05-02"
         }
       ],
       "name": "Zebrafish Information Network",

{bioversions-0.5.360 → bioversions-0.5.362}/src/bioversions/sources/chembl.py

@@ -23,6 +23,7 @@ class ChEMBLGetter(Getter):
     homepage_fmt = "ftp://ftp.ebi.ac.uk/pub/databases/chembl/ChEMBLdb/releases/chembl_{version}"
     date_fmt = "%d/%m/%Y"
     version_type = VersionType.sequential
+    collection = ["chembl", "chembl.target", "chembl.compound", "chembl.cell"]
 
     def get(self):
         """Get the latest ChEMBL version number."""

{bioversions-0.5.360 → bioversions-0.5.362}/src/bioversions/sources/kegg.py

@@ -5,6 +5,7 @@
 from typing import Mapping
 
 from bioversions.utils import Getter, VersionType, get_soup
+import bioregistry
 
 __all__ = [
     "KEGGGetter",
@@ -19,7 +20,7 @@ class KEGGGetter(Getter):
     name = "KEGG"
     date_fmt = "%B %d, %Y"
     version_type = VersionType.semver_minor
-    collection = ["kegg.pathway", "kegg.gene", "kegg.species"]  # TODO add more
+    collection = ["kegg", *bioregistry.get_has_parts("kegg")]
 
     def get(self) -> Mapping[str, str]:
         """Get the latest KEGG version number."""

{bioversions-0.5.360 → bioversions-0.5.362}/src/bioversions/version.py

@@ -9,7 +9,7 @@ __all__ = [
     "VERSION",
 ]
 
-VERSION = "0.5.360"
+VERSION = "0.5.362"
 
 
 def get_git_hash() -> str:

{bioversions-0.5.360 → bioversions-0.5.362/src/bioversions.egg-info}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: bioversions
-Version: 0.5.360
+Version: 0.5.362
 Summary: What's the current version for each biological database?
 Home-page: https://github.com/biopragmatics/bioversions
 Download-URL: https://github.com/biopragmatics/bioversions/releases