bioversions 0.5.344__tar.gz → 0.5.346__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (100) hide show
  1. {bioversions-0.5.344/src/bioversions.egg-info → bioversions-0.5.346}/PKG-INFO +1 -1
  2. {bioversions-0.5.344 → bioversions-0.5.346}/docs/_data/versions.yml +21 -2
  3. {bioversions-0.5.344 → bioversions-0.5.346}/docs/img/has_release_url.svg +1 -1
  4. {bioversions-0.5.344 → bioversions-0.5.346}/docs/img/version_date_types.svg +1 -1
  5. {bioversions-0.5.344 → bioversions-0.5.346}/docs/img/version_types.svg +1 -1
  6. {bioversions-0.5.344 → bioversions-0.5.346}/setup.cfg +1 -1
  7. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/resources/versions.json +37 -2
  8. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/version.py +1 -1
  9. {bioversions-0.5.344 → bioversions-0.5.346/src/bioversions.egg-info}/PKG-INFO +1 -1
  10. {bioversions-0.5.344 → bioversions-0.5.346}/LICENSE +0 -0
  11. {bioversions-0.5.344 → bioversions-0.5.346}/MANIFEST.in +0 -0
  12. {bioversions-0.5.344 → bioversions-0.5.346}/README.md +0 -0
  13. {bioversions-0.5.344 → bioversions-0.5.346}/docs/_config.yml +0 -0
  14. {bioversions-0.5.344 → bioversions-0.5.346}/docs/_includes/footer.html +0 -0
  15. {bioversions-0.5.344 → bioversions-0.5.346}/docs/_includes/head.html +0 -0
  16. {bioversions-0.5.344 → bioversions-0.5.346}/docs/download.md +0 -0
  17. {bioversions-0.5.344 → bioversions-0.5.346}/docs/failures.md +0 -0
  18. {bioversions-0.5.344 → bioversions-0.5.346}/docs/index.md +0 -0
  19. {bioversions-0.5.344 → bioversions-0.5.346}/docs/source/logo.png +0 -0
  20. {bioversions-0.5.344 → bioversions-0.5.346}/docs/summary.md +0 -0
  21. {bioversions-0.5.344 → bioversions-0.5.346}/pyproject.toml +0 -0
  22. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/__init__.py +0 -0
  23. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/__main__.py +0 -0
  24. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/charts.py +0 -0
  25. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/cli.py +0 -0
  26. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/py.typed +0 -0
  27. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/resources/__init__.py +0 -0
  28. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/resources/update.py +0 -0
  29. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/slack_client.py +0 -0
  30. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/__init__.py +0 -0
  31. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/antibodyregistry.py +0 -0
  32. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/bigg.py +0 -0
  33. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/biogrid.py +0 -0
  34. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/cellosaurus.py +0 -0
  35. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/chebi.py +0 -0
  36. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/chembl.py +0 -0
  37. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/chemidplus.py +0 -0
  38. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/civic.py +0 -0
  39. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/complexportal.py +0 -0
  40. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/daily.py +0 -0
  41. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/depmap.py +0 -0
  42. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/dgi.py +0 -0
  43. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/disgenet.py +0 -0
  44. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/drugbank.py +0 -0
  45. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/drugcentral.py +0 -0
  46. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/ensembl.py +0 -0
  47. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/expasy.py +0 -0
  48. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/flybase.py +0 -0
  49. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/guidetopharmacology.py +0 -0
  50. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/hgnc.py +0 -0
  51. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/homologene.py +0 -0
  52. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/icd10.py +0 -0
  53. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/icd11.py +0 -0
  54. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/icf.py +0 -0
  55. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/intact.py +0 -0
  56. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/interpro.py +0 -0
  57. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/itis.py +0 -0
  58. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/kegg.py +0 -0
  59. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/mesh.py +0 -0
  60. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/mgi.py +0 -0
  61. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/mirbase.py +0 -0
  62. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/moalmanac.py +0 -0
  63. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/msigdb.py +0 -0
  64. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/ncit.py +0 -0
  65. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/npass.py +0 -0
  66. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/obo.py +0 -0
  67. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/ols.py +0 -0
  68. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/omim.py +0 -0
  69. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/oncotree.py +0 -0
  70. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/pathbank.py +0 -0
  71. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/pathwaycommons.py +0 -0
  72. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/pfam.py +0 -0
  73. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/pombase.py +0 -0
  74. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/pr.py +0 -0
  75. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/pubchem.py +0 -0
  76. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/reactome.py +0 -0
  77. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/rfam.py +0 -0
  78. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/rgd.py +0 -0
  79. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/rhea.py +0 -0
  80. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/rxnorm.py +0 -0
  81. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/sgd.py +0 -0
  82. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/slm.py +0 -0
  83. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/stringdb.py +0 -0
  84. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/umls.py +0 -0
  85. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/uniprot.py +0 -0
  86. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/unversioned.py +0 -0
  87. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/wikipathways.py +0 -0
  88. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/sources/zfin.py +0 -0
  89. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/templates/base.html +0 -0
  90. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/templates/home.html +0 -0
  91. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/twitter_client.py +0 -0
  92. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/utils.py +0 -0
  93. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions/wsgi.py +0 -0
  94. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions.egg-info/SOURCES.txt +0 -0
  95. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions.egg-info/dependency_links.txt +0 -0
  96. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions.egg-info/entry_points.txt +0 -0
  97. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions.egg-info/not-zip-safe +0 -0
  98. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions.egg-info/requires.txt +0 -0
  99. {bioversions-0.5.344 → bioversions-0.5.346}/src/bioversions.egg-info/top_level.txt +0 -0
  100. {bioversions-0.5.344 → bioversions-0.5.346}/tests/test_bioversions.py +0 -0
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: bioversions
3
- Version: 0.5.344
3
+ Version: 0.5.346
4
4
  Summary: What's the current version for each biological database?
5
5
  Home-page: https://github.com/biopragmatics/bioversions
6
6
  Download-URL: https://github.com/biopragmatics/bioversions/releases
@@ -1,7 +1,7 @@
1
1
  annotations:
2
2
  author: runner
3
- date: '2024-04-16'
4
- revision: 645
3
+ date: '2024-04-18'
4
+ revision: 647
5
5
  database:
6
6
  - name: A nomenclatural ontology for biological names
7
7
  prefix: nomen
@@ -2551,6 +2551,9 @@ database:
2551
2551
  - homepage: http://ftp.ebi.ac.uk/pub/databases/genenames/hgnc/archive/monthly/json/hgnc_complete_set_2024-03-01.json
2552
2552
  retrieved: '2024-03-25'
2553
2553
  version: '2024-03-01'
2554
+ - homepage: http://ftp.ebi.ac.uk/pub/databases/genenames/hgnc/archive/monthly/json/hgnc_complete_set_2024-04-01.json
2555
+ retrieved: '2024-04-18'
2556
+ version: '2024-04-01'
2554
2557
  vtype: date
2555
2558
  - name: Histopathology Ontology
2556
2559
  prefix: hpath
@@ -3142,6 +3145,8 @@ database:
3142
3145
  version: 4.1.134
3143
3146
  - retrieved: '2024-03-25'
3144
3147
  version: 4.1.141
3148
+ - retrieved: '2024-04-18'
3149
+ version: 4.1.146
3145
3150
  vtype: date
3146
3151
  - name: Mathematical modeling ontology
3147
3152
  prefix: mamo
@@ -3964,6 +3969,12 @@ database:
3964
3969
  - date: '2024-04-13'
3965
3970
  retrieved: '2024-04-15'
3966
3971
  version: April 13, 2024
3972
+ - date: '2024-04-15'
3973
+ retrieved: '2024-04-17'
3974
+ version: April 15, 2024
3975
+ - date: '2024-04-16'
3976
+ retrieved: '2024-04-18'
3977
+ version: April 16, 2024
3967
3978
  vtype: date
3968
3979
  - name: 'OntoAvida: ontology for Avida digital evolution platform'
3969
3980
  prefix: ontoavida
@@ -6545,6 +6556,10 @@ database:
6545
6556
  version: '2024-04-15'
6546
6557
  - retrieved: '2024-04-16'
6547
6558
  version: '2024-04-16'
6559
+ - retrieved: '2024-04-17'
6560
+ version: '2024-04-17'
6561
+ - retrieved: '2024-04-18'
6562
+ version: '2024-04-18'
6548
6563
  vtype: date
6549
6564
  - name: SWO (The Software Ontology)
6550
6565
  prefix: swo
@@ -8678,6 +8693,10 @@ database:
8678
8693
  version: '2024-04-13'
8679
8694
  - retrieved: '2024-04-16'
8680
8695
  version: '2024-04-14'
8696
+ - retrieved: '2024-04-17'
8697
+ version: '2024-04-15'
8698
+ - retrieved: '2024-04-18'
8699
+ version: '2024-04-16'
8681
8700
  vtype: date
8682
8701
  - name: Zebrafish Phenotype Ontology
8683
8702
  prefix: zp
@@ -6,7 +6,7 @@
6
6
  <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
7
7
  <cc:Work>
8
8
  <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
9
- <dc:date>2024-04-16T00:48:41.353477</dc:date>
9
+ <dc:date>2024-04-18T00:48:44.363822</dc:date>
10
10
  <dc:format>image/svg+xml</dc:format>
11
11
  <dc:creator>
12
12
  <cc:Agent>
@@ -6,7 +6,7 @@
6
6
  <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
7
7
  <cc:Work>
8
8
  <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
9
- <dc:date>2024-04-16T00:48:41.282908</dc:date>
9
+ <dc:date>2024-04-18T00:48:44.311344</dc:date>
10
10
  <dc:format>image/svg+xml</dc:format>
11
11
  <dc:creator>
12
12
  <cc:Agent>
@@ -6,7 +6,7 @@
6
6
  <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
7
7
  <cc:Work>
8
8
  <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
9
- <dc:date>2024-04-16T00:48:41.173956</dc:date>
9
+ <dc:date>2024-04-18T00:48:44.229609</dc:date>
10
10
  <dc:format>image/svg+xml</dc:format>
11
11
  <dc:creator>
12
12
  <cc:Agent>
@@ -1,6 +1,6 @@
1
1
  [metadata]
2
2
  name = bioversions
3
- version = 0.5.344
3
+ version = 0.5.346
4
4
  description = What's the current version for each biological database?
5
5
  long_description = file: README.md
6
6
  long_description_content_type = text/markdown
@@ -1,7 +1,7 @@
1
1
  {
2
2
  "annotations": {
3
- "revision": 645,
4
- "date": "2024-04-16",
3
+ "revision": 647,
4
+ "date": "2024-04-18",
5
5
  "author": "runner"
6
6
  },
7
7
  "database": [
@@ -4641,6 +4641,11 @@
4641
4641
  "retrieved": "2024-03-25",
4642
4642
  "version": "2024-03-01",
4643
4643
  "homepage": "http://ftp.ebi.ac.uk/pub/databases/genenames/hgnc/archive/monthly/json/hgnc_complete_set_2024-03-01.json"
4644
+ },
4645
+ {
4646
+ "retrieved": "2024-04-18",
4647
+ "version": "2024-04-01",
4648
+ "homepage": "http://ftp.ebi.ac.uk/pub/databases/genenames/hgnc/archive/monthly/json/hgnc_complete_set_2024-04-01.json"
4644
4649
  }
4645
4650
  ],
4646
4651
  "name": "HGNC",
@@ -5691,6 +5696,10 @@
5691
5696
  {
5692
5697
  "retrieved": "2024-03-25",
5693
5698
  "version": "4.1.141"
5699
+ },
5700
+ {
5701
+ "retrieved": "2024-04-18",
5702
+ "version": "4.1.146"
5694
5703
  }
5695
5704
  ],
5696
5705
  "name": "Mass spectrometry ontology",
@@ -7189,6 +7198,16 @@
7189
7198
  "retrieved": "2024-04-15",
7190
7199
  "version": "April 13, 2024",
7191
7200
  "date": "2024-04-13"
7201
+ },
7202
+ {
7203
+ "retrieved": "2024-04-17",
7204
+ "version": "April 15, 2024",
7205
+ "date": "2024-04-15"
7206
+ },
7207
+ {
7208
+ "retrieved": "2024-04-18",
7209
+ "version": "April 16, 2024",
7210
+ "date": "2024-04-16"
7192
7211
  }
7193
7212
  ],
7194
7213
  "name": "Online Mendelian Inheritance in Man",
@@ -12060,6 +12079,14 @@
12060
12079
  {
12061
12080
  "retrieved": "2024-04-16",
12062
12081
  "version": "2024-04-16"
12082
+ },
12083
+ {
12084
+ "retrieved": "2024-04-17",
12085
+ "version": "2024-04-17"
12086
+ },
12087
+ {
12088
+ "retrieved": "2024-04-18",
12089
+ "version": "2024-04-18"
12063
12090
  }
12064
12091
  ],
12065
12092
  "name": "SwissLipids",
@@ -15896,6 +15923,14 @@
15896
15923
  {
15897
15924
  "retrieved": "2024-04-16",
15898
15925
  "version": "2024-04-14"
15926
+ },
15927
+ {
15928
+ "retrieved": "2024-04-17",
15929
+ "version": "2024-04-15"
15930
+ },
15931
+ {
15932
+ "retrieved": "2024-04-18",
15933
+ "version": "2024-04-16"
15899
15934
  }
15900
15935
  ],
15901
15936
  "name": "Zebrafish Information Network",
@@ -9,7 +9,7 @@ __all__ = [
9
9
  "VERSION",
10
10
  ]
11
11
 
12
- VERSION = "0.5.344"
12
+ VERSION = "0.5.346"
13
13
 
14
14
 
15
15
  def get_git_hash() -> str:
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: bioversions
3
- Version: 0.5.344
3
+ Version: 0.5.346
4
4
  Summary: What's the current version for each biological database?
5
5
  Home-page: https://github.com/biopragmatics/bioversions
6
6
  Download-URL: https://github.com/biopragmatics/bioversions/releases
File without changes
File without changes
File without changes