bioversions 0.5.334__tar.gz → 0.5.335__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (100) hide show
  1. {bioversions-0.5.334/src/bioversions.egg-info → bioversions-0.5.335}/PKG-INFO +1 -1
  2. {bioversions-0.5.334 → bioversions-0.5.335}/docs/_data/versions.yml +11 -2
  3. {bioversions-0.5.334 → bioversions-0.5.335}/docs/failures.md +1 -1
  4. {bioversions-0.5.334 → bioversions-0.5.335}/docs/img/has_release_url.svg +27 -27
  5. {bioversions-0.5.334 → bioversions-0.5.335}/docs/img/version_date_types.svg +62 -62
  6. {bioversions-0.5.334 → bioversions-0.5.335}/docs/img/version_types.svg +73 -73
  7. {bioversions-0.5.334 → bioversions-0.5.335}/setup.cfg +1 -1
  8. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/resources/versions.json +19 -2
  9. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/version.py +1 -1
  10. {bioversions-0.5.334 → bioversions-0.5.335/src/bioversions.egg-info}/PKG-INFO +1 -1
  11. {bioversions-0.5.334 → bioversions-0.5.335}/LICENSE +0 -0
  12. {bioversions-0.5.334 → bioversions-0.5.335}/MANIFEST.in +0 -0
  13. {bioversions-0.5.334 → bioversions-0.5.335}/README.md +0 -0
  14. {bioversions-0.5.334 → bioversions-0.5.335}/docs/_config.yml +0 -0
  15. {bioversions-0.5.334 → bioversions-0.5.335}/docs/_includes/footer.html +0 -0
  16. {bioversions-0.5.334 → bioversions-0.5.335}/docs/_includes/head.html +0 -0
  17. {bioversions-0.5.334 → bioversions-0.5.335}/docs/download.md +0 -0
  18. {bioversions-0.5.334 → bioversions-0.5.335}/docs/index.md +0 -0
  19. {bioversions-0.5.334 → bioversions-0.5.335}/docs/source/logo.png +0 -0
  20. {bioversions-0.5.334 → bioversions-0.5.335}/docs/summary.md +0 -0
  21. {bioversions-0.5.334 → bioversions-0.5.335}/pyproject.toml +0 -0
  22. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/__init__.py +0 -0
  23. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/__main__.py +0 -0
  24. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/charts.py +0 -0
  25. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/cli.py +0 -0
  26. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/py.typed +0 -0
  27. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/resources/__init__.py +0 -0
  28. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/resources/update.py +0 -0
  29. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/slack_client.py +0 -0
  30. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/__init__.py +0 -0
  31. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/antibodyregistry.py +0 -0
  32. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/bigg.py +0 -0
  33. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/biogrid.py +0 -0
  34. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/cellosaurus.py +0 -0
  35. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/chebi.py +0 -0
  36. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/chembl.py +0 -0
  37. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/chemidplus.py +0 -0
  38. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/civic.py +0 -0
  39. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/complexportal.py +0 -0
  40. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/daily.py +0 -0
  41. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/depmap.py +0 -0
  42. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/dgi.py +0 -0
  43. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/disgenet.py +0 -0
  44. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/drugbank.py +0 -0
  45. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/drugcentral.py +0 -0
  46. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/ensembl.py +0 -0
  47. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/expasy.py +0 -0
  48. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/flybase.py +0 -0
  49. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/guidetopharmacology.py +0 -0
  50. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/hgnc.py +0 -0
  51. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/homologene.py +0 -0
  52. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/icd10.py +0 -0
  53. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/icd11.py +0 -0
  54. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/icf.py +0 -0
  55. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/intact.py +0 -0
  56. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/interpro.py +0 -0
  57. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/itis.py +0 -0
  58. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/kegg.py +0 -0
  59. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/mesh.py +0 -0
  60. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/mgi.py +0 -0
  61. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/mirbase.py +0 -0
  62. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/moalmanac.py +0 -0
  63. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/msigdb.py +0 -0
  64. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/ncit.py +0 -0
  65. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/npass.py +0 -0
  66. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/obo.py +0 -0
  67. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/ols.py +0 -0
  68. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/omim.py +0 -0
  69. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/oncotree.py +0 -0
  70. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/pathbank.py +0 -0
  71. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/pathwaycommons.py +0 -0
  72. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/pfam.py +0 -0
  73. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/pombase.py +0 -0
  74. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/pr.py +0 -0
  75. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/pubchem.py +0 -0
  76. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/reactome.py +0 -0
  77. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/rfam.py +0 -0
  78. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/rgd.py +0 -0
  79. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/rhea.py +0 -0
  80. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/rxnorm.py +0 -0
  81. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/sgd.py +0 -0
  82. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/slm.py +0 -0
  83. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/stringdb.py +0 -0
  84. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/umls.py +0 -0
  85. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/uniprot.py +0 -0
  86. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/unversioned.py +0 -0
  87. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/wikipathways.py +0 -0
  88. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/sources/zfin.py +0 -0
  89. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/templates/base.html +0 -0
  90. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/templates/home.html +0 -0
  91. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/twitter_client.py +0 -0
  92. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/utils.py +0 -0
  93. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/wsgi.py +0 -0
  94. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions.egg-info/SOURCES.txt +0 -0
  95. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions.egg-info/dependency_links.txt +0 -0
  96. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions.egg-info/entry_points.txt +0 -0
  97. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions.egg-info/not-zip-safe +0 -0
  98. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions.egg-info/requires.txt +0 -0
  99. {bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions.egg-info/top_level.txt +0 -0
  100. {bioversions-0.5.334 → bioversions-0.5.335}/tests/test_bioversions.py +0 -0
{bioversions-0.5.334/src/bioversions.egg-info → bioversions-0.5.335}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: bioversions
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- Version: 0.5.334
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+ Version: 0.5.335
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  Summary: What's the current version for each biological database?
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  Home-page: https://github.com/biopragmatics/bioversions
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  Download-URL: https://github.com/biopragmatics/bioversions/releases
{bioversions-0.5.334 → bioversions-0.5.335}/docs/_data/versions.yml RENAMED
@@ -1,7 +1,7 @@
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  annotations:
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  author: runner
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- date: '2024-04-06'
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- revision: 635
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+ date: '2024-04-07'
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+ revision: 636
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  database:
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  - name: A nomenclatural ontology for biological names
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  prefix: nomen
@@ -2687,6 +2687,8 @@ database:
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  version: '2023-10-09'
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  - retrieved: '2024-03-25'
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  version: '2024-03-06'
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+ - retrieved: '2024-04-07'
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+ version: '2024-04-03'
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  vtype: date
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  - name: Human Reference Atlas Common Coordinate Framework Ontology
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  prefix: ccf
@@ -3915,6 +3917,9 @@ database:
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  - date: '2024-04-04'
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  retrieved: '2024-04-06'
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  version: April 4, 2024
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+ - date: '2024-04-05'
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+ retrieved: '2024-04-07'
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+ version: April 5, 2024
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  vtype: date
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  - name: 'OntoAvida: ontology for Avida digital evolution platform'
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  prefix: ontoavida
@@ -6468,6 +6473,8 @@ database:
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  version: '2024-04-05'
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  - retrieved: '2024-04-06'
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  - name: SWO (The Software Ontology)
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@@ -8575,6 +8582,8 @@ database:
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  - retrieved: '2024-04-06'
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  version: '2024-04-04'
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+ - retrieved: '2024-04-07'
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+ version: '2024-04-05'
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  vtype: date
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  - name: Zebrafish Phenotype Ontology
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  prefix: zp
{bioversions-0.5.334 → bioversions-0.5.335}/docs/failures.md RENAMED
@@ -3,4 +3,4 @@
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  - issue parsing Drug Gene Interaction Database:
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  - failed to resolve DisGeNet
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  - failed to resolve Antibody Registry
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- - failed to resolve NPASS
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+ - failed to resolve PathBank
{bioversions-0.5.334 → bioversions-0.5.335}/docs/img/has_release_url.svg RENAMED
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{bioversions-0.5.334 → bioversions-0.5.335}/docs/img/version_date_types.svg RENAMED
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{bioversions-0.5.334 → bioversions-0.5.335}/setup.cfg RENAMED
@@ -1,6 +1,6 @@
1
1
  [metadata]
2
2
  name = bioversions
3
- version = 0.5.334
3
+ version = 0.5.335
4
4
  description = What's the current version for each biological database?
5
5
  long_description = file: README.md
6
6
  long_description_content_type = text/markdown
{bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/resources/versions.json RENAMED
@@ -1,7 +1,7 @@
1
1
  {
2
2
  "annotations": {
3
- "revision": 635,
4
- "date": "2024-04-06",
3
+ "revision": 636,
4
+ "date": "2024-04-07",
5
5
  "author": "runner"
6
6
  },
7
7
  "database": [
@@ -4887,6 +4887,10 @@
4887
4887
  {
4888
4888
  "retrieved": "2024-03-25",
4889
4889
  "version": "2024-03-06"
4890
+ },
4891
+ {
4892
+ "retrieved": "2024-04-07",
4893
+ "version": "2024-04-03"
4890
4894
  }
4891
4895
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4892
4896
  "vtype": "date"
@@ -7104,6 +7108,11 @@
7104
7108
  "retrieved": "2024-04-06",
7105
7109
  "version": "April 4, 2024",
7106
7110
  "date": "2024-04-04"
7111
+ },
7112
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7113
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7114
+ "version": "April 5, 2024",
7115
+ "date": "2024-04-05"
7107
7116
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7108
7117
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7109
7118
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@@ -11921,6 +11930,10 @@
11921
11930
  {
11922
11931
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11923
11932
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11933
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11934
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11935
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11936
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11924
11937
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11925
11938
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11926
11939
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@@ -15707,6 +15720,10 @@
15707
15720
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15708
15721
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15709
15722
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15723
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15725
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15726
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15710
15727
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15711
15728
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15712
15729
  "name": "Zebrafish Information Network",
{bioversions-0.5.334 → bioversions-0.5.335}/src/bioversions/version.py RENAMED
@@ -9,7 +9,7 @@ __all__ = [
9
9
  "VERSION",
10
10
  ]
11
11
 
12
- VERSION = "0.5.334"
12
+ VERSION = "0.5.335"
13
13
 
14
14
 
15
15
  def get_git_hash() -> str:
{bioversions-0.5.334 → bioversions-0.5.335/src/bioversions.egg-info}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: bioversions
3
- Version: 0.5.334
3
+ Version: 0.5.335
4
4
  Summary: What's the current version for each biological database?
5
5
  Home-page: https://github.com/biopragmatics/bioversions
6
6
  Download-URL: https://github.com/biopragmatics/bioversions/releases
{bioversions-0.5.334 → bioversions-0.5.335}/LICENSE RENAMED
File without changes
{bioversions-0.5.334 → bioversions-0.5.335}/MANIFEST.in RENAMED
File without changes
{bioversions-0.5.334 → bioversions-0.5.335}/README.md RENAMED
File without changes