bioversions 0.5.328__tar.gz → 0.5.330__tar.gz

{bioversions-0.5.328/src/bioversions.egg-info → bioversions-0.5.330}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: bioversions
-Version: 0.5.328
+Version: 0.5.330
 Summary: What's the current version for each biological database?
 Home-page: https://github.com/biopragmatics/bioversions
 Download-URL: https://github.com/biopragmatics/bioversions/releases

{bioversions-0.5.328 → bioversions-0.5.330}/docs/_data/versions.yml

@@ -1,7 +1,7 @@
 annotations:
   author: runner
-  date: '2024-03-31'
-  revision: 629
+  date: '2024-04-02'
+  revision: 631
 database:
 - name: A nomenclatural ontology for biological names
   prefix: nomen
@@ -324,6 +324,9 @@ database:
   - homepage: https://downloads.thebiogrid.org/BioGRID/Release-Archive/BIOGRID-4.4.231
     retrieved: '2024-03-25'
     version: 4.4.231
+  - homepage: https://downloads.thebiogrid.org/BioGRID/Release-Archive/BIOGRID-4.4.232
+    retrieved: '2024-04-02'
+    version: 4.4.232
   vtype: semver
 - name: Bioinformatics operations, data types, formats, identifiers and topics
   prefix: edam
@@ -733,6 +736,9 @@ database:
   - homepage: ftp://ftp.ebi.ac.uk/pub/databases/chebi/archive/rel231/
     retrieved: '2024-03-25'
     version: '231'
+  - homepage: ftp://ftp.ebi.ac.uk/pub/databases/chebi/archive/rel232/
+    retrieved: '2024-04-02'
+    version: '232'
   vtype: sequential
 - name: ChEBI Integrated Role Ontology
   prefix: chiro
@@ -4923,6 +4929,9 @@ database:
   - homepage: https://ftp.ncbi.nlm.nih.gov/pubchem/Compound/Monthly/2024-03-01
     retrieved: '2024-03-25'
     version: '2024-03-01'
+  - homepage: https://ftp.ncbi.nlm.nih.gov/pubchem/Compound/Monthly/2024-04-01
+    retrieved: '2024-04-01'
+    version: '2024-04-01'
   vtype: date
 - name: Radiation Biology Ontology
   prefix: rbo
@@ -5035,6 +5044,8 @@ database:
     version: '2024-03-25'
   - retrieved: '2024-03-27'
     version: '2024-03-26'
+  - retrieved: '2024-04-02'
+    version: '2024-03-22'
   vtype: date
 - name: Rat Strain Ontology
   prefix: rs
@@ -5320,6 +5331,9 @@ database:
   - homepage: https://download.nlm.nih.gov/umls/kss/rxnorm/RxNorm_full_03042024.zip
     retrieved: '2024-03-25'
     version: '2024-03-04'
+  - homepage: https://download.nlm.nih.gov/umls/kss/rxnorm/RxNorm_full_04012024.zip
+    retrieved: '2024-04-02'
+    version: '2024-04-01'
   vtype: date
 - name: Saccharomyces Genome Database
   prefix: sgd
@@ -6401,6 +6415,10 @@ database:
     version: '2024-03-29'
   - retrieved: '2024-03-31'
     version: '2024-03-31'
+  - retrieved: '2024-04-01'
+    version: '2024-04-01'
+  - retrieved: '2024-04-02'
+    version: '2024-04-02'
   vtype: date
 - name: SWO (The Software Ontology)
   prefix: swo
@@ -8494,6 +8512,10 @@ database:
     version: '2024-03-28'
   - retrieved: '2024-03-31'
     version: '2024-03-29'
+  - retrieved: '2024-04-01'
+    version: '2024-03-30'
+  - retrieved: '2024-04-02'
+    version: '2024-03-31'
   vtype: date
 - name: Zebrafish Phenotype Ontology
   prefix: zp

bioversions-0.5.330/docs/failures.md

@@ -0,0 +1,5 @@
+# Errors
+
+- issue parsing Drug Gene Interaction Database: 
+- failed to resolve DisGeNet
+- failed to resolve Antibody Registry

{bioversions-0.5.328 → bioversions-0.5.330}/docs/img/has_release_url.svg

@@ -6,7 +6,7 @@
   <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
    <cc:Work>
     <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
-    <dc:date>2024-03-31T00:52:16.167632</dc:date>
+    <dc:date>2024-04-02T00:49:21.282893</dc:date>
     <dc:format>image/svg+xml</dc:format>
     <dc:creator>
      <cc:Agent>

{bioversions-0.5.328 → bioversions-0.5.330}/docs/img/version_date_types.svg

@@ -6,7 +6,7 @@
   <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
    <cc:Work>
     <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
-    <dc:date>2024-03-31T00:52:16.098551</dc:date>
+    <dc:date>2024-04-02T00:49:21.230264</dc:date>
     <dc:format>image/svg+xml</dc:format>
     <dc:creator>
      <cc:Agent>

{bioversions-0.5.328 → bioversions-0.5.330}/docs/img/version_types.svg

@@ -6,7 +6,7 @@
   <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
    <cc:Work>
     <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
-    <dc:date>2024-03-31T00:52:15.992024</dc:date>
+    <dc:date>2024-04-02T00:49:21.148252</dc:date>
     <dc:format>image/svg+xml</dc:format>
     <dc:creator>
      <cc:Agent>

{bioversions-0.5.328 → bioversions-0.5.330}/setup.cfg

@@ -1,6 +1,6 @@
 [metadata]
 name = bioversions
-version = 0.5.328
+version = 0.5.330
 description = What's the current version for each biological database?
 long_description = file: README.md
 long_description_content_type = text/markdown

{bioversions-0.5.328 → bioversions-0.5.330}/src/bioversions/resources/versions.json

@@ -1,7 +1,7 @@
 {
   "annotations": {
-    "revision": 629,
-    "date": "2024-03-31",
+    "revision": 631,
+    "date": "2024-04-02",
     "author": "runner"
   },
   "database": [
@@ -589,6 +589,11 @@
           "retrieved": "2024-03-25",
           "version": "4.4.231",
           "homepage": "https://downloads.thebiogrid.org/BioGRID/Release-Archive/BIOGRID-4.4.231"
+        },
+        {
+          "retrieved": "2024-04-02",
+          "version": "4.4.232",
+          "homepage": "https://downloads.thebiogrid.org/BioGRID/Release-Archive/BIOGRID-4.4.232"
         }
       ],
       "vtype": "semver"
@@ -1349,6 +1354,11 @@
           "retrieved": "2024-03-25",
           "version": "231",
           "homepage": "ftp://ftp.ebi.ac.uk/pub/databases/chebi/archive/rel231/"
+        },
+        {
+          "retrieved": "2024-04-02",
+          "version": "232",
+          "homepage": "ftp://ftp.ebi.ac.uk/pub/databases/chebi/archive/rel232/"
         }
       ],
       "vtype": "sequential"
@@ -8920,6 +8930,11 @@
           "retrieved": "2024-03-25",
           "version": "2024-03-01",
           "homepage": "https://ftp.ncbi.nlm.nih.gov/pubchem/Compound/Monthly/2024-03-01"
+        },
+        {
+          "retrieved": "2024-04-01",
+          "version": "2024-04-01",
+          "homepage": "https://ftp.ncbi.nlm.nih.gov/pubchem/Compound/Monthly/2024-04-01"
         }
       ],
       "name": "PubChem",
@@ -9141,6 +9156,10 @@
         {
           "retrieved": "2024-03-27",
           "version": "2024-03-26"
+        },
+        {
+          "retrieved": "2024-04-02",
+          "version": "2024-03-22"
         }
       ],
       "name": "Rat Genome Database",
@@ -9654,6 +9673,11 @@
           "retrieved": "2024-03-25",
           "version": "2024-03-04",
           "homepage": "https://download.nlm.nih.gov/umls/kss/rxnorm/RxNorm_full_03042024.zip"
+        },
+        {
+          "retrieved": "2024-04-02",
+          "version": "2024-04-01",
+          "homepage": "https://download.nlm.nih.gov/umls/kss/rxnorm/RxNorm_full_04012024.zip"
         }
       ],
       "name": "RxNorm",
@@ -11795,6 +11819,14 @@
         {
           "retrieved": "2024-03-31",
           "version": "2024-03-31"
+        },
+        {
+          "retrieved": "2024-04-01",
+          "version": "2024-04-01"
+        },
+        {
+          "retrieved": "2024-04-02",
+          "version": "2024-04-02"
         }
       ],
       "name": "SwissLipids",
@@ -15553,6 +15585,14 @@
         {
           "retrieved": "2024-03-31",
           "version": "2024-03-29"
+        },
+        {
+          "retrieved": "2024-04-01",
+          "version": "2024-03-30"
+        },
+        {
+          "retrieved": "2024-04-02",
+          "version": "2024-03-31"
         }
       ],
       "name": "Zebrafish Information Network",

{bioversions-0.5.328 → bioversions-0.5.330}/src/bioversions/version.py

@@ -9,7 +9,7 @@ __all__ = [
     "VERSION",
 ]
 
-VERSION = "0.5.328"
+VERSION = "0.5.330"
 
 
 def get_git_hash() -> str:

{bioversions-0.5.328 → bioversions-0.5.330/src/bioversions.egg-info}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: bioversions
-Version: 0.5.328
+Version: 0.5.330
 Summary: What's the current version for each biological database?
 Home-page: https://github.com/biopragmatics/bioversions
 Download-URL: https://github.com/biopragmatics/bioversions/releases

bioversions-0.5.328/docs/failures.md

@@ -1,7 +0,0 @@
-# Errors
-
-- issue parsing Drug Gene Interaction Database: 
-- failed to resolve DisGeNet
-- failed to resolve Antibody Registry
-- failed to resolve National Cancer Institute Thesaurus
-- failed to resolve PathBank