bioversions 0.5.288__tar.gz → 0.5.290__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (95) hide show
  1. {bioversions-0.5.288/src/bioversions.egg-info → bioversions-0.5.290}/PKG-INFO +1 -1
  2. {bioversions-0.5.288 → bioversions-0.5.290}/docs/_data/versions.yml +20 -2
  3. {bioversions-0.5.288 → bioversions-0.5.290}/docs/img/has_release_url.svg +1 -1
  4. {bioversions-0.5.288 → bioversions-0.5.290}/docs/img/version_date_types.svg +1 -1
  5. {bioversions-0.5.288 → bioversions-0.5.290}/docs/img/version_types.svg +1 -1
  6. {bioversions-0.5.288 → bioversions-0.5.290}/setup.cfg +1 -1
  7. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/resources/versions.json +36 -2
  8. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/version.py +1 -1
  9. {bioversions-0.5.288 → bioversions-0.5.290/src/bioversions.egg-info}/PKG-INFO +1 -1
  10. {bioversions-0.5.288 → bioversions-0.5.290}/LICENSE +0 -0
  11. {bioversions-0.5.288 → bioversions-0.5.290}/MANIFEST.in +0 -0
  12. {bioversions-0.5.288 → bioversions-0.5.290}/README.md +0 -0
  13. {bioversions-0.5.288 → bioversions-0.5.290}/docs/_config.yml +0 -0
  14. {bioversions-0.5.288 → bioversions-0.5.290}/docs/_includes/footer.html +0 -0
  15. {bioversions-0.5.288 → bioversions-0.5.290}/docs/_includes/head.html +0 -0
  16. {bioversions-0.5.288 → bioversions-0.5.290}/docs/download.md +0 -0
  17. {bioversions-0.5.288 → bioversions-0.5.290}/docs/failures.md +0 -0
  18. {bioversions-0.5.288 → bioversions-0.5.290}/docs/index.md +0 -0
  19. {bioversions-0.5.288 → bioversions-0.5.290}/docs/source/logo.png +0 -0
  20. {bioversions-0.5.288 → bioversions-0.5.290}/docs/summary.md +0 -0
  21. {bioversions-0.5.288 → bioversions-0.5.290}/pyproject.toml +0 -0
  22. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/__init__.py +0 -0
  23. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/__main__.py +0 -0
  24. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/charts.py +0 -0
  25. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/cli.py +0 -0
  26. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/py.typed +0 -0
  27. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/resources/__init__.py +0 -0
  28. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/resources/update.py +0 -0
  29. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/slack_client.py +0 -0
  30. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/__init__.py +0 -0
  31. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/antibodyregistry.py +0 -0
  32. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/bigg.py +0 -0
  33. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/biogrid.py +0 -0
  34. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/cellosaurus.py +0 -0
  35. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/chebi.py +0 -0
  36. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/chembl.py +0 -0
  37. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/chemidplus.py +0 -0
  38. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/complexportal.py +0 -0
  39. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/daily.py +0 -0
  40. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/depmap.py +0 -0
  41. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/dgi.py +0 -0
  42. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/disgenet.py +0 -0
  43. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/drugbank.py +0 -0
  44. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/drugcentral.py +0 -0
  45. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/ensembl.py +0 -0
  46. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/expasy.py +0 -0
  47. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/flybase.py +0 -0
  48. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/guidetopharmacology.py +0 -0
  49. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/hgnc.py +0 -0
  50. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/homologene.py +0 -0
  51. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/intact.py +0 -0
  52. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/interpro.py +0 -0
  53. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/itis.py +0 -0
  54. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/kegg.py +0 -0
  55. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/mesh.py +0 -0
  56. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/mgi.py +0 -0
  57. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/mirbase.py +0 -0
  58. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/moalmanac.py +0 -0
  59. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/msigdb.py +0 -0
  60. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/ncit.py +0 -0
  61. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/npass.py +0 -0
  62. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/obo.py +0 -0
  63. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/ols.py +0 -0
  64. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/oncotree.py +0 -0
  65. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/pathbank.py +0 -0
  66. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/pathwaycommons.py +0 -0
  67. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/pfam.py +0 -0
  68. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/pombase.py +0 -0
  69. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/pr.py +0 -0
  70. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/pubchem.py +0 -0
  71. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/reactome.py +0 -0
  72. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/rfam.py +0 -0
  73. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/rgd.py +0 -0
  74. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/rhea.py +0 -0
  75. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/rxnorm.py +0 -0
  76. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/sgd.py +0 -0
  77. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/slm.py +0 -0
  78. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/stringdb.py +0 -0
  79. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/umls.py +0 -0
  80. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/uniprot.py +0 -0
  81. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/unversioned.py +0 -0
  82. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/wikipathways.py +0 -0
  83. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/sources/zfin.py +0 -0
  84. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/templates/base.html +0 -0
  85. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/templates/home.html +0 -0
  86. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/twitter_client.py +0 -0
  87. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/utils.py +0 -0
  88. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions/wsgi.py +0 -0
  89. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions.egg-info/SOURCES.txt +0 -0
  90. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions.egg-info/dependency_links.txt +0 -0
  91. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions.egg-info/entry_points.txt +0 -0
  92. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions.egg-info/not-zip-safe +0 -0
  93. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions.egg-info/requires.txt +0 -0
  94. {bioversions-0.5.288 → bioversions-0.5.290}/src/bioversions.egg-info/top_level.txt +0 -0
  95. {bioversions-0.5.288 → bioversions-0.5.290}/tests/test_bioversions.py +0 -0
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: bioversions
3
- Version: 0.5.288
3
+ Version: 0.5.290
4
4
  Summary: What's the current version for each biological database?
5
5
  Home-page: https://github.com/biopragmatics/bioversions
6
6
  Download-URL: https://github.com/biopragmatics/bioversions/releases
@@ -1,7 +1,7 @@
1
1
  annotations:
2
2
  author: runner
3
- date: '2023-11-14'
4
- revision: 590
3
+ date: '2023-11-16'
4
+ revision: 592
5
5
  database:
6
6
  - name: A nomenclatural ontology for biological names
7
7
  prefix: nomen
@@ -1440,6 +1440,9 @@ database:
1440
1440
  - date: '2023-05-10'
1441
1441
  retrieved: '2023-06-14'
1442
1442
  version: '53'
1443
+ - date: '2023-11-01'
1444
+ retrieved: '2023-11-15'
1445
+ version: '54'
1443
1446
  vtype: date
1444
1447
  - name: eagle-i resource ontology
1445
1448
  prefix: ero
@@ -1875,6 +1878,8 @@ database:
1875
1878
  version: '2023-09-06'
1876
1879
  - retrieved: '2023-11-02'
1877
1880
  version: '2023-10-06'
1881
+ - retrieved: '2023-11-16'
1882
+ version: '2023-11-03'
1878
1883
  vtype: date
1879
1884
  - name: Flora Phenotype Ontology
1880
1885
  prefix: flopo
@@ -2219,6 +2224,8 @@ database:
2219
2224
  version: '2023-08-09'
2220
2225
  - retrieved: '2023-11-11'
2221
2226
  version: '2023-11-02'
2227
+ - retrieved: '2023-11-16'
2228
+ version: '2023-11-09'
2222
2229
  vtype: semver
2223
2230
  - name: Glycan Naming and Subsumption Ontology (GNOme)
2224
2231
  prefix: gno
@@ -4755,6 +4762,9 @@ database:
4755
4762
  - homepage: ftp://ftp.ebi.ac.uk/pub/databases/Rfam/14.9/
4756
4763
  retrieved: '2023-03-24'
4757
4764
  version: '14.9'
4765
+ - homepage: ftp://ftp.ebi.ac.uk/pub/databases/Rfam/14.10/
4766
+ retrieved: '2023-11-15'
4767
+ version: '14.10'
4758
4768
  vtype: semver_minor
4759
4769
  - name: Rhea
4760
4770
  prefix: rhea
@@ -5904,6 +5914,10 @@ database:
5904
5914
  version: '2023-11-12'
5905
5915
  - retrieved: '2023-11-14'
5906
5916
  version: '2023-11-13'
5917
+ - retrieved: '2023-11-15'
5918
+ version: '2023-11-15'
5919
+ - retrieved: '2023-11-16'
5920
+ version: '2023-11-16'
5907
5921
  vtype: date
5908
5922
  - name: SWO (The Software Ontology)
5909
5923
  prefix: swo
@@ -7875,6 +7889,10 @@ database:
7875
7889
  version: '2023-11-11'
7876
7890
  - retrieved: '2023-11-14'
7877
7891
  version: '2023-11-12'
7892
+ - retrieved: '2023-11-15'
7893
+ version: '2023-11-13'
7894
+ - retrieved: '2023-11-16'
7895
+ version: '2023-11-14'
7878
7896
  vtype: date
7879
7897
  - name: Zebrafish Phenotype Ontology
7880
7898
  prefix: zp
@@ -6,7 +6,7 @@
6
6
  <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
7
7
  <cc:Work>
8
8
  <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
9
- <dc:date>2023-11-14T00:46:26.606958</dc:date>
9
+ <dc:date>2023-11-16T00:49:08.425213</dc:date>
10
10
  <dc:format>image/svg+xml</dc:format>
11
11
  <dc:creator>
12
12
  <cc:Agent>
@@ -6,7 +6,7 @@
6
6
  <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
7
7
  <cc:Work>
8
8
  <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
9
- <dc:date>2023-11-14T00:46:26.544656</dc:date>
9
+ <dc:date>2023-11-16T00:49:08.375599</dc:date>
10
10
  <dc:format>image/svg+xml</dc:format>
11
11
  <dc:creator>
12
12
  <cc:Agent>
@@ -6,7 +6,7 @@
6
6
  <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
7
7
  <cc:Work>
8
8
  <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
9
- <dc:date>2023-11-14T00:46:26.450157</dc:date>
9
+ <dc:date>2023-11-16T00:49:08.299587</dc:date>
10
10
  <dc:format>image/svg+xml</dc:format>
11
11
  <dc:creator>
12
12
  <cc:Agent>
@@ -1,6 +1,6 @@
1
1
  [metadata]
2
2
  name = bioversions
3
- version = 0.5.288
3
+ version = 0.5.290
4
4
  description = What's the current version for each biological database?
5
5
  long_description = file: README.md
6
6
  long_description_content_type = text/markdown
@@ -1,7 +1,7 @@
1
1
  {
2
2
  "annotations": {
3
- "revision": 590,
4
- "date": "2023-11-14",
3
+ "revision": 592,
4
+ "date": "2023-11-16",
5
5
  "author": "runner"
6
6
  },
7
7
  "database": [
@@ -2603,6 +2603,11 @@
2603
2603
  "retrieved": "2023-06-14",
2604
2604
  "version": "53",
2605
2605
  "date": "2023-05-10"
2606
+ },
2607
+ {
2608
+ "retrieved": "2023-11-15",
2609
+ "version": "54",
2610
+ "date": "2023-11-01"
2606
2611
  }
2607
2612
  ],
2608
2613
  "vtype": "date"
@@ -3435,6 +3440,10 @@
3435
3440
  {
3436
3441
  "retrieved": "2023-11-02",
3437
3442
  "version": "2023-10-06"
3443
+ },
3444
+ {
3445
+ "retrieved": "2023-11-16",
3446
+ "version": "2023-11-03"
3438
3447
  }
3439
3448
  ],
3440
3449
  "vtype": "date"
@@ -4044,6 +4053,10 @@
4044
4053
  {
4045
4054
  "retrieved": "2023-11-11",
4046
4055
  "version": "2023-11-02"
4056
+ },
4057
+ {
4058
+ "retrieved": "2023-11-16",
4059
+ "version": "2023-11-09"
4047
4060
  }
4048
4061
  ],
4049
4062
  "name": "Glycan Naming and Subsumption Ontology",
@@ -8662,6 +8675,11 @@
8662
8675
  "retrieved": "2023-03-24",
8663
8676
  "version": "14.9",
8664
8677
  "homepage": "ftp://ftp.ebi.ac.uk/pub/databases/Rfam/14.9/"
8678
+ },
8679
+ {
8680
+ "retrieved": "2023-11-15",
8681
+ "version": "14.10",
8682
+ "homepage": "ftp://ftp.ebi.ac.uk/pub/databases/Rfam/14.10/"
8665
8683
  }
8666
8684
  ],
8667
8685
  "vtype": "semver_minor"
@@ -10898,6 +10916,14 @@
10898
10916
  {
10899
10917
  "retrieved": "2023-11-14",
10900
10918
  "version": "2023-11-13"
10919
+ },
10920
+ {
10921
+ "retrieved": "2023-11-15",
10922
+ "version": "2023-11-15"
10923
+ },
10924
+ {
10925
+ "retrieved": "2023-11-16",
10926
+ "version": "2023-11-16"
10901
10927
  }
10902
10928
  ],
10903
10929
  "name": "SwissLipids",
@@ -14420,6 +14446,14 @@
14420
14446
  {
14421
14447
  "retrieved": "2023-11-14",
14422
14448
  "version": "2023-11-12"
14449
+ },
14450
+ {
14451
+ "retrieved": "2023-11-15",
14452
+ "version": "2023-11-13"
14453
+ },
14454
+ {
14455
+ "retrieved": "2023-11-16",
14456
+ "version": "2023-11-14"
14423
14457
  }
14424
14458
  ],
14425
14459
  "name": "Zebrafish Information Network",
@@ -9,7 +9,7 @@ __all__ = [
9
9
  "VERSION",
10
10
  ]
11
11
 
12
- VERSION = "0.5.288"
12
+ VERSION = "0.5.290"
13
13
 
14
14
 
15
15
  def get_git_hash() -> str:
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: bioversions
3
- Version: 0.5.288
3
+ Version: 0.5.290
4
4
  Summary: What's the current version for each biological database?
5
5
  Home-page: https://github.com/biopragmatics/bioversions
6
6
  Download-URL: https://github.com/biopragmatics/bioversions/releases
File without changes
File without changes
File without changes