bioversions 0.5.123__tar.gz → 0.5.125__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (95) hide show
  1. {bioversions-0.5.123/src/bioversions.egg-info → bioversions-0.5.125}/PKG-INFO +1 -1
  2. {bioversions-0.5.123 → bioversions-0.5.125}/docs/_data/versions.yml +19 -2
  3. {bioversions-0.5.123 → bioversions-0.5.125}/docs/img/has_release_url.svg +1 -1
  4. {bioversions-0.5.123 → bioversions-0.5.125}/docs/img/version_date_types.svg +1 -1
  5. {bioversions-0.5.123 → bioversions-0.5.125}/docs/img/version_types.svg +1 -1
  6. {bioversions-0.5.123 → bioversions-0.5.125}/setup.cfg +1 -1
  7. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/resources/versions.json +33 -2
  8. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/version.py +1 -1
  9. {bioversions-0.5.123 → bioversions-0.5.125/src/bioversions.egg-info}/PKG-INFO +1 -1
  10. {bioversions-0.5.123 → bioversions-0.5.125}/LICENSE +0 -0
  11. {bioversions-0.5.123 → bioversions-0.5.125}/MANIFEST.in +0 -0
  12. {bioversions-0.5.123 → bioversions-0.5.125}/README.md +0 -0
  13. {bioversions-0.5.123 → bioversions-0.5.125}/docs/_config.yml +0 -0
  14. {bioversions-0.5.123 → bioversions-0.5.125}/docs/_includes/footer.html +0 -0
  15. {bioversions-0.5.123 → bioversions-0.5.125}/docs/_includes/head.html +0 -0
  16. {bioversions-0.5.123 → bioversions-0.5.125}/docs/download.md +0 -0
  17. {bioversions-0.5.123 → bioversions-0.5.125}/docs/failures.md +0 -0
  18. {bioversions-0.5.123 → bioversions-0.5.125}/docs/index.md +0 -0
  19. {bioversions-0.5.123 → bioversions-0.5.125}/docs/source/logo.png +0 -0
  20. {bioversions-0.5.123 → bioversions-0.5.125}/docs/summary.md +0 -0
  21. {bioversions-0.5.123 → bioversions-0.5.125}/pyproject.toml +0 -0
  22. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/__init__.py +0 -0
  23. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/__main__.py +0 -0
  24. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/charts.py +0 -0
  25. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/cli.py +0 -0
  26. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/py.typed +0 -0
  27. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/resources/__init__.py +0 -0
  28. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/resources/update.py +0 -0
  29. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/slack_client.py +0 -0
  30. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/__init__.py +0 -0
  31. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/antibodyregistry.py +0 -0
  32. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/bigg.py +0 -0
  33. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/biofacquim.py +0 -0
  34. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/biogrid.py +0 -0
  35. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/cellosaurus.py +0 -0
  36. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/chebi.py +0 -0
  37. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/chembl.py +0 -0
  38. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/chemidplus.py +0 -0
  39. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/complexportal.py +0 -0
  40. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/daily.py +0 -0
  41. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/depmap.py +0 -0
  42. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/dgi.py +0 -0
  43. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/disgenet.py +0 -0
  44. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/drugbank.py +0 -0
  45. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/drugcentral.py +0 -0
  46. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/ensembl.py +0 -0
  47. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/expasy.py +0 -0
  48. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/flybase.py +0 -0
  49. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/guidetopharmacology.py +0 -0
  50. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/hgnc.py +0 -0
  51. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/homologene.py +0 -0
  52. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/intact.py +0 -0
  53. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/interpro.py +0 -0
  54. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/itis.py +0 -0
  55. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/kegg.py +0 -0
  56. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/mesh.py +0 -0
  57. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/mirbase.py +0 -0
  58. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/moalmanac.py +0 -0
  59. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/msigdb.py +0 -0
  60. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/ncit.py +0 -0
  61. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/npass.py +0 -0
  62. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/obo.py +0 -0
  63. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/ols.py +0 -0
  64. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/oncotree.py +0 -0
  65. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/pathbank.py +0 -0
  66. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/pathwaycommons.py +0 -0
  67. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/pfam.py +0 -0
  68. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/pombase.py +0 -0
  69. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/pr.py +0 -0
  70. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/pubchem.py +0 -0
  71. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/reactome.py +0 -0
  72. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/rfam.py +0 -0
  73. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/rgd.py +0 -0
  74. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/rhea.py +0 -0
  75. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/rxnorm.py +0 -0
  76. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/sgd.py +0 -0
  77. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/slm.py +0 -0
  78. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/stringdb.py +0 -0
  79. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/umls.py +0 -0
  80. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/uniprot.py +0 -0
  81. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/unversioned.py +0 -0
  82. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/wikipathways.py +0 -0
  83. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/sources/zfin.py +0 -0
  84. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/templates/base.html +0 -0
  85. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/templates/home.html +0 -0
  86. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/twitter_client.py +0 -0
  87. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/utils.py +0 -0
  88. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions/wsgi.py +0 -0
  89. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions.egg-info/SOURCES.txt +0 -0
  90. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions.egg-info/dependency_links.txt +0 -0
  91. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions.egg-info/entry_points.txt +0 -0
  92. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions.egg-info/not-zip-safe +0 -0
  93. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions.egg-info/requires.txt +0 -0
  94. {bioversions-0.5.123 → bioversions-0.5.125}/src/bioversions.egg-info/top_level.txt +0 -0
  95. {bioversions-0.5.123 → bioversions-0.5.125}/tests/test_bioversions.py +0 -0
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: bioversions
3
- Version: 0.5.123
3
+ Version: 0.5.125
4
4
  Summary: What's the current version for each biological database?
5
5
  Home-page: https://github.com/biopragmatics/bioversions
6
6
  Download-URL: https://github.com/biopragmatics/bioversions/releases
@@ -1,7 +1,7 @@
1
1
  annotations:
2
2
  author: runner
3
- date: '2023-05-03'
4
- revision: 425
3
+ date: '2023-05-05'
4
+ revision: 427
5
5
  database:
6
6
  - name: A nomenclatural ontology for biological names
7
7
  prefix: nomen
@@ -1422,6 +1422,8 @@ database:
1422
1422
  version: 03-Aug-2022
1423
1423
  - retrieved: '2023-03-24'
1424
1424
  version: '2023-02-22'
1425
+ - retrieved: '2023-05-04'
1426
+ version: '2023-05-03'
1425
1427
  vtype: date
1426
1428
  - name: Experimental condition ontology
1427
1429
  prefix: xco
@@ -4005,6 +4007,9 @@ database:
4005
4007
  - date: '2023-02-22'
4006
4008
  retrieved: '2023-03-24'
4007
4009
  version: '126'
4010
+ - date: '2023-05-03'
4011
+ retrieved: '2023-05-04'
4012
+ version: '127'
4008
4013
  vtype: date
4009
4014
  - name: Rice ontology
4010
4015
  prefix: co_320
@@ -4758,6 +4763,10 @@ database:
4758
4763
  version: '2023-05-02'
4759
4764
  - retrieved: '2023-05-03'
4760
4765
  version: '2023-05-03'
4766
+ - retrieved: '2023-05-04'
4767
+ version: '2023-05-04'
4768
+ - retrieved: '2023-05-05'
4769
+ version: '2023-05-05'
4761
4770
  vtype: date
4762
4771
  - name: SWO (The Software Ontology)
4763
4772
  prefix: swo
@@ -5094,6 +5103,10 @@ database:
5094
5103
  homepage: ftp://ftp.uniprot.org/pub/databases/uniprot/previous_releases/release-2023_01/
5095
5104
  retrieved: '2023-03-24'
5096
5105
  version: '2023_01'
5106
+ - date: '2023-02-01'
5107
+ homepage: ftp://ftp.uniprot.org/pub/databases/uniprot/previous_releases/release-2023_02/
5108
+ retrieved: '2023-05-04'
5109
+ version: '2023_02'
5097
5110
  vtype: month
5098
5111
  - name: Unit Ontology
5099
5112
  prefix: uo
@@ -6291,6 +6304,10 @@ database:
6291
6304
  version: '2023-04-30'
6292
6305
  - retrieved: '2023-05-03'
6293
6306
  version: '2023-05-01'
6307
+ - retrieved: '2023-05-04'
6308
+ version: '2023-05-02'
6309
+ - retrieved: '2023-05-05'
6310
+ version: '2023-05-03'
6294
6311
  vtype: date
6295
6312
  - name: Zebrafish Phenotype Ontology
6296
6313
  prefix: zp
@@ -6,7 +6,7 @@
6
6
  <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
7
7
  <cc:Work>
8
8
  <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
9
- <dc:date>2023-05-03T00:53:34.171697</dc:date>
9
+ <dc:date>2023-05-05T00:48:30.377708</dc:date>
10
10
  <dc:format>image/svg+xml</dc:format>
11
11
  <dc:creator>
12
12
  <cc:Agent>
@@ -6,7 +6,7 @@
6
6
  <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
7
7
  <cc:Work>
8
8
  <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
9
- <dc:date>2023-05-03T00:53:34.071193</dc:date>
9
+ <dc:date>2023-05-05T00:48:30.320043</dc:date>
10
10
  <dc:format>image/svg+xml</dc:format>
11
11
  <dc:creator>
12
12
  <cc:Agent>
@@ -6,7 +6,7 @@
6
6
  <rdf:RDF xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:cc="http://creativecommons.org/ns#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
7
7
  <cc:Work>
8
8
  <dc:type rdf:resource="http://purl.org/dc/dcmitype/StillImage"/>
9
- <dc:date>2023-05-03T00:53:33.918340</dc:date>
9
+ <dc:date>2023-05-05T00:48:30.234773</dc:date>
10
10
  <dc:format>image/svg+xml</dc:format>
11
11
  <dc:creator>
12
12
  <cc:Agent>
@@ -1,6 +1,6 @@
1
1
  [metadata]
2
2
  name = bioversions
3
- version = 0.5.123
3
+ version = 0.5.125
4
4
  description = What's the current version for each biological database?
5
5
  long_description = file: README.md
6
6
  long_description_content_type = text/markdown
@@ -1,7 +1,7 @@
1
1
  {
2
2
  "annotations": {
3
- "revision": 425,
4
- "date": "2023-05-03",
3
+ "revision": 427,
4
+ "date": "2023-05-05",
5
5
  "author": "runner"
6
6
  },
7
7
  "database": [
@@ -2572,6 +2572,10 @@
2572
2572
  {
2573
2573
  "retrieved": "2023-03-24",
2574
2574
  "version": "2023-02-22"
2575
+ },
2576
+ {
2577
+ "retrieved": "2023-05-04",
2578
+ "version": "2023-05-03"
2575
2579
  }
2576
2580
  ],
2577
2581
  "vtype": "date"
@@ -7268,6 +7272,11 @@
7268
7272
  "retrieved": "2023-03-24",
7269
7273
  "version": "126",
7270
7274
  "date": "2023-02-22"
7275
+ },
7276
+ {
7277
+ "retrieved": "2023-05-04",
7278
+ "version": "127",
7279
+ "date": "2023-05-03"
7271
7280
  }
7272
7281
  ],
7273
7282
  "vtype": "date"
@@ -8734,6 +8743,14 @@
8734
8743
  {
8735
8744
  "retrieved": "2023-05-03",
8736
8745
  "version": "2023-05-03"
8746
+ },
8747
+ {
8748
+ "retrieved": "2023-05-04",
8749
+ "version": "2023-05-04"
8750
+ },
8751
+ {
8752
+ "retrieved": "2023-05-05",
8753
+ "version": "2023-05-05"
8737
8754
  }
8738
8755
  ],
8739
8756
  "name": "SwissLipid",
@@ -9356,6 +9373,12 @@
9356
9373
  "version": "2023_01",
9357
9374
  "homepage": "ftp://ftp.uniprot.org/pub/databases/uniprot/previous_releases/release-2023_01/",
9358
9375
  "date": "2023-01-01"
9376
+ },
9377
+ {
9378
+ "retrieved": "2023-05-04",
9379
+ "version": "2023_02",
9380
+ "homepage": "ftp://ftp.uniprot.org/pub/databases/uniprot/previous_releases/release-2023_02/",
9381
+ "date": "2023-02-01"
9359
9382
  }
9360
9383
  ],
9361
9384
  "vtype": "month"
@@ -11405,6 +11428,14 @@
11405
11428
  {
11406
11429
  "retrieved": "2023-05-03",
11407
11430
  "version": "2023-05-01"
11431
+ },
11432
+ {
11433
+ "retrieved": "2023-05-04",
11434
+ "version": "2023-05-02"
11435
+ },
11436
+ {
11437
+ "retrieved": "2023-05-05",
11438
+ "version": "2023-05-03"
11408
11439
  }
11409
11440
  ],
11410
11441
  "name": "Zebrafish Information Network",
@@ -9,7 +9,7 @@ __all__ = [
9
9
  "VERSION",
10
10
  ]
11
11
 
12
- VERSION = "0.5.123"
12
+ VERSION = "0.5.125"
13
13
 
14
14
 
15
15
  def get_git_hash() -> str:
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: bioversions
3
- Version: 0.5.123
3
+ Version: 0.5.125
4
4
  Summary: What's the current version for each biological database?
5
5
  Home-page: https://github.com/biopragmatics/bioversions
6
6
  Download-URL: https://github.com/biopragmatics/bioversions/releases
File without changes
File without changes
File without changes