biomedisa 24.8.2__tar.gz → 24.8.3__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (48) hide show
  1. {biomedisa-24.8.2 → biomedisa-24.8.3}/PKG-INFO +1 -1
  2. {biomedisa-24.8.2 → biomedisa-24.8.3}/pyproject.toml +1 -1
  3. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/deeplearning.py +2 -0
  4. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa.egg-info/PKG-INFO +1 -1
  5. {biomedisa-24.8.2 → biomedisa-24.8.3}/LICENSE +0 -0
  6. {biomedisa-24.8.2 → biomedisa-24.8.3}/README.md +0 -0
  7. {biomedisa-24.8.2 → biomedisa-24.8.3}/setup.cfg +0 -0
  8. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/__init__.py +0 -0
  9. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/__main__.py +0 -0
  10. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/features/DataGenerator.py +0 -0
  11. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/features/DataGeneratorCrop.py +0 -0
  12. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/features/PredictDataGenerator.py +0 -0
  13. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/features/PredictDataGeneratorCrop.py +0 -0
  14. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/features/__init__.py +0 -0
  15. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/features/active_contour.py +0 -0
  16. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/features/amira_to_np/__init__.py +0 -0
  17. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/features/amira_to_np/amira_data_stream.py +0 -0
  18. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/features/amira_to_np/amira_grammar.py +0 -0
  19. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/features/amira_to_np/amira_header.py +0 -0
  20. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/features/amira_to_np/amira_helper.py +0 -0
  21. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/features/assd.py +0 -0
  22. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/features/biomedisa_helper.py +0 -0
  23. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/features/create_slices.py +0 -0
  24. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/features/crop_helper.py +0 -0
  25. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/features/curvop_numba.py +0 -0
  26. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/features/django_env.py +0 -0
  27. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/features/keras_helper.py +0 -0
  28. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/features/nc_reader.py +0 -0
  29. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/features/pid.py +0 -0
  30. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/features/process_image.py +0 -0
  31. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/features/pycuda_test.py +0 -0
  32. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/features/random_walk/__init__.py +0 -0
  33. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/features/random_walk/gpu_kernels.py +0 -0
  34. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/features/random_walk/pycuda_large.py +0 -0
  35. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/features/random_walk/pycuda_large_allx.py +0 -0
  36. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/features/random_walk/pycuda_small.py +0 -0
  37. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/features/random_walk/pycuda_small_allx.py +0 -0
  38. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/features/random_walk/pyopencl_large.py +0 -0
  39. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/features/random_walk/pyopencl_small.py +0 -0
  40. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/features/random_walk/rw_large.py +0 -0
  41. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/features/random_walk/rw_small.py +0 -0
  42. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/features/remove_outlier.py +0 -0
  43. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/features/split_volume.py +0 -0
  44. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/interpolation.py +0 -0
  45. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/mesh.py +0 -0
  46. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa.egg-info/SOURCES.txt +0 -0
  47. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa.egg-info/dependency_links.txt +0 -0
  48. {biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa.egg-info/top_level.txt +0 -0
{biomedisa-24.8.2 → biomedisa-24.8.3}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: biomedisa
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- Version: 24.8.2
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+ Version: 24.8.3
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  Summary: Segmentation of 3D volumetric image data
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  Author: Philipp Lösel
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  Author-email: philipp.loesel@anu.edu.au
{biomedisa-24.8.2 → biomedisa-24.8.3}/pyproject.toml RENAMED
@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
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  [project]
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  name = "biomedisa"
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- version = "24.8.2"
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+ version = "24.8.3"
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  authors = [
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  { name="Philipp Lösel"}, {email="philipp.loesel@anu.edu.au" },
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  ]
{biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa/deeplearning.py RENAMED
@@ -282,6 +282,8 @@ def deep_learning(img_data, label_data=None, val_img_data=None, val_label_data=N
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  if bm.django_env and not bm.remote and not bm.tarfile:
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  bm.path_to_cropped_image = unique_file_path(bm.path_to_cropped_image)
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  filename = 'final.' + filename
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+ if bm.refinement:
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+ filename += '.refined'
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  bm.path_to_final = os.path.dirname(bm.path_to_image) + '/' + filename + extension
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  if bm.django_env and not bm.remote and not bm.tarfile:
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  bm.path_to_final = unique_file_path(bm.path_to_final)
{biomedisa-24.8.2 → biomedisa-24.8.3}/src/biomedisa.egg-info/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: biomedisa
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- Version: 24.8.2
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+ Version: 24.8.3
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  Summary: Segmentation of 3D volumetric image data
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  Author: Philipp Lösel
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  Author-email: philipp.loesel@anu.edu.au
{biomedisa-24.8.2 → biomedisa-24.8.3}/LICENSE RENAMED
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{biomedisa-24.8.2 → biomedisa-24.8.3}/README.md RENAMED
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{biomedisa-24.8.2 → biomedisa-24.8.3}/setup.cfg RENAMED
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