biocypher 0.6.0__tar.gz → 0.6.1__tar.gz

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  1. {biocypher-0.6.0 → biocypher-0.6.1}/PKG-INFO +1 -1
  2. {biocypher-0.6.0 → biocypher-0.6.1}/biocypher/__init__.py +3 -2
  3. {biocypher-0.6.0 → biocypher-0.6.1}/biocypher/_get.py +5 -6
  4. {biocypher-0.6.0 → biocypher-0.6.1}/biocypher/_metadata.py +1 -1
  5. {biocypher-0.6.0 → biocypher-0.6.1}/pyproject.toml +1 -1
  6. {biocypher-0.6.0 → biocypher-0.6.1}/LICENSE +0 -0
  7. {biocypher-0.6.0 → biocypher-0.6.1}/README.md +0 -0
  8. {biocypher-0.6.0 → biocypher-0.6.1}/biocypher/_config/__init__.py +0 -0
  9. {biocypher-0.6.0 → biocypher-0.6.1}/biocypher/_config/biocypher_config.yaml +0 -0
  10. {biocypher-0.6.0 → biocypher-0.6.1}/biocypher/_config/test_config.yaml +0 -0
  11. {biocypher-0.6.0 → biocypher-0.6.1}/biocypher/_config/test_schema_config.yaml +0 -0
  12. {biocypher-0.6.0 → biocypher-0.6.1}/biocypher/_config/test_schema_config_disconnected.yaml +0 -0
  13. {biocypher-0.6.0 → biocypher-0.6.1}/biocypher/_config/test_schema_config_extended.yaml +0 -0
  14. {biocypher-0.6.0 → biocypher-0.6.1}/biocypher/_core.py +0 -0
  15. {biocypher-0.6.0 → biocypher-0.6.1}/biocypher/_create.py +0 -0
  16. {biocypher-0.6.0 → biocypher-0.6.1}/biocypher/_deduplicate.py +0 -0
  17. {biocypher-0.6.0 → biocypher-0.6.1}/biocypher/_logger.py +0 -0
  18. {biocypher-0.6.0 → biocypher-0.6.1}/biocypher/_mapping.py +0 -0
  19. {biocypher-0.6.0 → biocypher-0.6.1}/biocypher/_misc.py +0 -0
  20. {biocypher-0.6.0 → biocypher-0.6.1}/biocypher/_ontology.py +0 -0
  21. {biocypher-0.6.0 → biocypher-0.6.1}/biocypher/_translate.py +0 -0
  22. {biocypher-0.6.0 → biocypher-0.6.1}/biocypher/output/__init__.py +0 -0
  23. {biocypher-0.6.0 → biocypher-0.6.1}/biocypher/output/connect/__init__.py +0 -0
  24. {biocypher-0.6.0 → biocypher-0.6.1}/biocypher/output/connect/_neo4j_driver.py +0 -0
  25. {biocypher-0.6.0 → biocypher-0.6.1}/biocypher/output/in_memory/__init__.py +0 -0
  26. {biocypher-0.6.0 → biocypher-0.6.1}/biocypher/output/in_memory/_pandas.py +0 -0
  27. {biocypher-0.6.0 → biocypher-0.6.1}/biocypher/output/write/__init__.py +0 -0
  28. {biocypher-0.6.0 → biocypher-0.6.1}/biocypher/output/write/_batch_writer.py +0 -0
  29. {biocypher-0.6.0 → biocypher-0.6.1}/biocypher/output/write/_get_writer.py +0 -0
  30. {biocypher-0.6.0 → biocypher-0.6.1}/biocypher/output/write/_writer.py +0 -0
  31. {biocypher-0.6.0 → biocypher-0.6.1}/biocypher/output/write/graph/__init__.py +0 -0
  32. {biocypher-0.6.0 → biocypher-0.6.1}/biocypher/output/write/graph/_arangodb.py +0 -0
  33. {biocypher-0.6.0 → biocypher-0.6.1}/biocypher/output/write/graph/_neo4j.py +0 -0
  34. {biocypher-0.6.0 → biocypher-0.6.1}/biocypher/output/write/graph/_networkx.py +0 -0
  35. {biocypher-0.6.0 → biocypher-0.6.1}/biocypher/output/write/graph/_rdf.py +0 -0
  36. {biocypher-0.6.0 → biocypher-0.6.1}/biocypher/output/write/relational/__init__.py +0 -0
  37. {biocypher-0.6.0 → biocypher-0.6.1}/biocypher/output/write/relational/_csv.py +0 -0
  38. {biocypher-0.6.0 → biocypher-0.6.1}/biocypher/output/write/relational/_postgresql.py +0 -0
  39. {biocypher-0.6.0 → biocypher-0.6.1}/biocypher/output/write/relational/_sqlite.py +0 -0
{biocypher-0.6.0 → biocypher-0.6.1}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: biocypher
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- Version: 0.6.0
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+ Version: 0.6.1
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  Summary: A unifying framework for biomedical research knowledge graphs
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  Home-page: https://github.com/biocypher/biocypher
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  License: MIT
{biocypher-0.6.0 → biocypher-0.6.1}/biocypher/__init__.py RENAMED
@@ -21,10 +21,11 @@ __all__ = [
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  "log",
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  "Driver",
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  "BioCypher",
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- "Resource",
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+ "FileDownload",
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+ "APIRequest",
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  ]
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- from ._get import Resource
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+ from ._get import APIRequest, FileDownload
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  from ._core import BioCypher
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  from ._config import config, module_data
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  from ._logger import log, logger, logfile
{biocypher-0.6.0 → biocypher-0.6.1}/biocypher/_get.py RENAMED
@@ -228,13 +228,12 @@ class Downloader:
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  paths = []
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  for url in file_download.url_s:
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  fname = url[url.rfind("/") + 1 :].split("?")[0]
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- paths.append(
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- self._retrieve(
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- url=url,
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- fname=fname,
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- path=os.path.join(self.cache_dir, file_download.name),
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- )
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+ path = self._retrieve(
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+ url=url,
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+ fname=fname,
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+ path=os.path.join(self.cache_dir, file_download.name),
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  )
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+ paths.append(path)
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  else:
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  paths = []
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  fname = file_download.url_s[
{biocypher-0.6.0 → biocypher-0.6.1}/biocypher/_metadata.py RENAMED
@@ -19,7 +19,7 @@ import importlib.metadata
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  import toml
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- _VERSION = "0.6.0"
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+ _VERSION = "0.6.1"
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  def get_metadata():
{biocypher-0.6.0 → biocypher-0.6.1}/pyproject.toml RENAMED
@@ -1,6 +1,6 @@
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  [tool.poetry]
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  name = "biocypher"
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- version = "0.6.0"
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+ version = "0.6.1"
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  description = "A unifying framework for biomedical research knowledge graphs"
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  authors = [
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  "Sebastian Lobentanzer <sebastian.lobentanzer@gmail.com>",
{biocypher-0.6.0 → biocypher-0.6.1}/LICENSE RENAMED
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{biocypher-0.6.0 → biocypher-0.6.1}/README.md RENAMED
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{biocypher-0.6.0 → biocypher-0.6.1}/biocypher/_core.py RENAMED
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{biocypher-0.6.0 → biocypher-0.6.1}/biocypher/_misc.py RENAMED
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