bijux-rag 0.1.0__tar.gz

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Files changed (120) hide show
  1. bijux_rag-0.1.0/.gitignore +88 -0
  2. bijux_rag-0.1.0/LICENSE +18 -0
  3. bijux_rag-0.1.0/PKG-INFO +310 -0
  4. bijux_rag-0.1.0/README.md +233 -0
  5. bijux_rag-0.1.0/pyproject.toml +132 -0
  6. bijux_rag-0.1.0/src/bijux_rag/__init__.py +512 -0
  7. bijux_rag-0.1.0/src/bijux_rag/_version.py +34 -0
  8. bijux_rag-0.1.0/src/bijux_rag/boundaries/__init__.py +30 -0
  9. bijux_rag-0.1.0/src/bijux_rag/boundaries/adapters/__init__.py +39 -0
  10. bijux_rag-0.1.0/src/bijux_rag/boundaries/adapters/exception_bridge.py +108 -0
  11. bijux_rag-0.1.0/src/bijux_rag/boundaries/adapters/pydantic_edges.py +81 -0
  12. bijux_rag-0.1.0/src/bijux_rag/boundaries/adapters/serde.py +349 -0
  13. bijux_rag-0.1.0/src/bijux_rag/boundaries/app_config.py +20 -0
  14. bijux_rag-0.1.0/src/bijux_rag/boundaries/shells/__init__.py +19 -0
  15. bijux_rag-0.1.0/src/bijux_rag/boundaries/shells/cli.py +326 -0
  16. bijux_rag-0.1.0/src/bijux_rag/boundaries/shells/rag_api_shell.py +68 -0
  17. bijux_rag-0.1.0/src/bijux_rag/boundaries/shells/rag_file_shell.py +55 -0
  18. bijux_rag-0.1.0/src/bijux_rag/boundaries/shells/rag_main.py +80 -0
  19. bijux_rag-0.1.0/src/bijux_rag/boundaries/shells/typer_cli.py +31 -0
  20. bijux_rag-0.1.0/src/bijux_rag/boundaries/web/__init__.py +12 -0
  21. bijux_rag-0.1.0/src/bijux_rag/boundaries/web/fastapi_app.py +301 -0
  22. bijux_rag-0.1.0/src/bijux_rag/core/__init__.py +58 -0
  23. bijux_rag-0.1.0/src/bijux_rag/core/rag_types.py +273 -0
  24. bijux_rag-0.1.0/src/bijux_rag/core/rules_dsl.py +162 -0
  25. bijux_rag-0.1.0/src/bijux_rag/core/rules_lint.py +93 -0
  26. bijux_rag-0.1.0/src/bijux_rag/core/rules_pred.py +103 -0
  27. bijux_rag-0.1.0/src/bijux_rag/core/structural_dedup.py +59 -0
  28. bijux_rag-0.1.0/src/bijux_rag/domain/__init__.py +41 -0
  29. bijux_rag-0.1.0/src/bijux_rag/domain/capabilities.py +50 -0
  30. bijux_rag-0.1.0/src/bijux_rag/domain/composition.py +47 -0
  31. bijux_rag-0.1.0/src/bijux_rag/domain/effects/__init__.py +125 -0
  32. bijux_rag-0.1.0/src/bijux_rag/domain/effects/async_/__init__.py +120 -0
  33. bijux_rag-0.1.0/src/bijux_rag/domain/effects/async_/concurrency.py +303 -0
  34. bijux_rag-0.1.0/src/bijux_rag/domain/effects/async_/plan.py +220 -0
  35. bijux_rag-0.1.0/src/bijux_rag/domain/effects/async_/resilience.py +252 -0
  36. bijux_rag-0.1.0/src/bijux_rag/domain/effects/async_/stream.py +303 -0
  37. bijux_rag-0.1.0/src/bijux_rag/domain/effects/io_plan.py +52 -0
  38. bijux_rag-0.1.0/src/bijux_rag/domain/effects/io_retry.py +79 -0
  39. bijux_rag-0.1.0/src/bijux_rag/domain/effects/tx.py +84 -0
  40. bijux_rag-0.1.0/src/bijux_rag/domain/facades.py +61 -0
  41. bijux_rag-0.1.0/src/bijux_rag/domain/idempotent.py +56 -0
  42. bijux_rag-0.1.0/src/bijux_rag/domain/logging.py +55 -0
  43. bijux_rag-0.1.0/src/bijux_rag/fp/__init__.py +95 -0
  44. bijux_rag-0.1.0/src/bijux_rag/fp/applicative.py +10 -0
  45. bijux_rag-0.1.0/src/bijux_rag/fp/combinators.py +218 -0
  46. bijux_rag-0.1.0/src/bijux_rag/fp/core.py +377 -0
  47. bijux_rag-0.1.0/src/bijux_rag/fp/effects/__init__.py +71 -0
  48. bijux_rag-0.1.0/src/bijux_rag/fp/effects/configurable.py +64 -0
  49. bijux_rag-0.1.0/src/bijux_rag/fp/effects/layering.py +44 -0
  50. bijux_rag-0.1.0/src/bijux_rag/fp/effects/reader.py +47 -0
  51. bijux_rag-0.1.0/src/bijux_rag/fp/effects/state.py +55 -0
  52. bijux_rag-0.1.0/src/bijux_rag/fp/effects/writer.py +124 -0
  53. bijux_rag-0.1.0/src/bijux_rag/fp/error.py +24 -0
  54. bijux_rag-0.1.0/src/bijux_rag/fp/functor.py +123 -0
  55. bijux_rag-0.1.0/src/bijux_rag/fp/monoid.py +172 -0
  56. bijux_rag-0.1.0/src/bijux_rag/fp/option_result.py +14 -0
  57. bijux_rag-0.1.0/src/bijux_rag/fp/validation.py +178 -0
  58. bijux_rag-0.1.0/src/bijux_rag/infra/__init__.py +8 -0
  59. bijux_rag-0.1.0/src/bijux_rag/infra/adapters/__init__.py +20 -0
  60. bijux_rag-0.1.0/src/bijux_rag/infra/adapters/async_runtime.py +22 -0
  61. bijux_rag-0.1.0/src/bijux_rag/infra/adapters/atomic_storage.py +31 -0
  62. bijux_rag-0.1.0/src/bijux_rag/infra/adapters/clock.py +28 -0
  63. bijux_rag-0.1.0/src/bijux_rag/infra/adapters/file_storage.py +85 -0
  64. bijux_rag-0.1.0/src/bijux_rag/infra/adapters/logger.py +28 -0
  65. bijux_rag-0.1.0/src/bijux_rag/infra/adapters/memory_storage.py +30 -0
  66. bijux_rag-0.1.0/src/bijux_rag/interop/__init__.py +35 -0
  67. bijux_rag-0.1.0/src/bijux_rag/interop/dataframes.py +63 -0
  68. bijux_rag-0.1.0/src/bijux_rag/interop/returns_compat.py +74 -0
  69. bijux_rag-0.1.0/src/bijux_rag/interop/stdlib_fp.py +40 -0
  70. bijux_rag-0.1.0/src/bijux_rag/interop/toolz_compat.py +116 -0
  71. bijux_rag-0.1.0/src/bijux_rag/pipelines/__init__.py +33 -0
  72. bijux_rag-0.1.0/src/bijux_rag/pipelines/cli.py +84 -0
  73. bijux_rag-0.1.0/src/bijux_rag/pipelines/configured.py +144 -0
  74. bijux_rag-0.1.0/src/bijux_rag/pipelines/distributed.py +49 -0
  75. bijux_rag-0.1.0/src/bijux_rag/pipelines/specs.py +157 -0
  76. bijux_rag-0.1.0/src/bijux_rag/policies/__init__.py +76 -0
  77. bijux_rag-0.1.0/src/bijux_rag/policies/breakers.py +282 -0
  78. bijux_rag-0.1.0/src/bijux_rag/policies/memo.py +152 -0
  79. bijux_rag-0.1.0/src/bijux_rag/policies/reports.py +165 -0
  80. bijux_rag-0.1.0/src/bijux_rag/policies/resources.py +128 -0
  81. bijux_rag-0.1.0/src/bijux_rag/policies/retries.py +172 -0
  82. bijux_rag-0.1.0/src/bijux_rag/py.typed +0 -0
  83. bijux_rag-0.1.0/src/bijux_rag/rag/__init__.py +81 -0
  84. bijux_rag-0.1.0/src/bijux_rag/rag/app.py +471 -0
  85. bijux_rag-0.1.0/src/bijux_rag/rag/chunking.py +74 -0
  86. bijux_rag-0.1.0/src/bijux_rag/rag/clean_cfg.py +75 -0
  87. bijux_rag-0.1.0/src/bijux_rag/rag/config.py +127 -0
  88. bijux_rag-0.1.0/src/bijux_rag/rag/core.py +258 -0
  89. bijux_rag-0.1.0/src/bijux_rag/rag/domain/__init__.py +44 -0
  90. bijux_rag-0.1.0/src/bijux_rag/rag/domain/chunk.py +82 -0
  91. bijux_rag-0.1.0/src/bijux_rag/rag/domain/embedding.py +25 -0
  92. bijux_rag-0.1.0/src/bijux_rag/rag/domain/metadata.py +19 -0
  93. bijux_rag-0.1.0/src/bijux_rag/rag/domain/perf.py +126 -0
  94. bijux_rag-0.1.0/src/bijux_rag/rag/domain/text.py +16 -0
  95. bijux_rag-0.1.0/src/bijux_rag/rag/embedders.py +108 -0
  96. bijux_rag-0.1.0/src/bijux_rag/rag/generators.py +66 -0
  97. bijux_rag-0.1.0/src/bijux_rag/rag/indexes.py +608 -0
  98. bijux_rag-0.1.0/src/bijux_rag/rag/ports.py +143 -0
  99. bijux_rag-0.1.0/src/bijux_rag/rag/rag_api.py +217 -0
  100. bijux_rag-0.1.0/src/bijux_rag/rag/rerankers.py +49 -0
  101. bijux_rag-0.1.0/src/bijux_rag/rag/stages.py +227 -0
  102. bijux_rag-0.1.0/src/bijux_rag/rag/stdlib_fp.py +49 -0
  103. bijux_rag-0.1.0/src/bijux_rag/rag/streaming_rag.py +122 -0
  104. bijux_rag-0.1.0/src/bijux_rag/rag/types.py +72 -0
  105. bijux_rag-0.1.0/src/bijux_rag/result/__init__.py +119 -0
  106. bijux_rag-0.1.0/src/bijux_rag/result/folds.py +139 -0
  107. bijux_rag-0.1.0/src/bijux_rag/result/stream.py +174 -0
  108. bijux_rag-0.1.0/src/bijux_rag/result/types.py +356 -0
  109. bijux_rag-0.1.0/src/bijux_rag/streaming/__init__.py +62 -0
  110. bijux_rag-0.1.0/src/bijux_rag/streaming/compose.py +66 -0
  111. bijux_rag-0.1.0/src/bijux_rag/streaming/contiguity.py +34 -0
  112. bijux_rag-0.1.0/src/bijux_rag/streaming/fanin.py +68 -0
  113. bijux_rag-0.1.0/src/bijux_rag/streaming/fanout.py +112 -0
  114. bijux_rag-0.1.0/src/bijux_rag/streaming/observability.py +83 -0
  115. bijux_rag-0.1.0/src/bijux_rag/streaming/sampling.py +69 -0
  116. bijux_rag-0.1.0/src/bijux_rag/streaming/time.py +128 -0
  117. bijux_rag-0.1.0/src/bijux_rag/streaming/types.py +47 -0
  118. bijux_rag-0.1.0/src/bijux_rag/tree/__init__.py +53 -0
  119. bijux_rag-0.1.0/src/bijux_rag/tree/_traversal.py +145 -0
  120. bijux_rag-0.1.0/src/bijux_rag/tree/folds.py +149 -0
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+ # OS
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+ .DS_Store
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+ .DS_Store?
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+ ._*
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+ .Spotlight-V100
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+ .Trashes
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+ ehthumbs.db
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+ Thumbs.db
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+ desktop.ini
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+ Icon?
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+ $RECYCLE.BIN/
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+ *.swp
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+ *.swo
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+
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+ # Python
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+ __pycache__/
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+ *.py[cod]
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+ *.pyo
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+ *.pyd
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+ *.so
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+ build/
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+ dist/
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+ *.egg-info/
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+ .eggs/
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+ *.egg
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+ *.whl
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+ *.spec
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+
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+ # Environments
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+ .venv/
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+ .venv*/
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+ .env
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+ .envrc
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+ .env.*
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+ .conda/
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+ .condarc
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+ *.conda
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+ .direnv/
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+ .pdm.toml
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+
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+ # Test/coverage
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+ .coverage
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+ .coverage.*
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+ .coverage/
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+ htmlcov/
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+ .tox/
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+ .nox/
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+ .pytest_cache/
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+ .mypy_cache/
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+ .ruff_cache/
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+ .pytype/
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+ .hypothesis/
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+ .mutmut-cache/
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+ .cache/
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+ .benchmarks/
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+ artifacts/
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+
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+ # IDEs/editors
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+ .idea/
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+ .vscode/
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+ .vscode-test/
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+ *.code-workspace
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+ *.sublime-project
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+ *.sublime-workspace
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+
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+ # Docs/Node
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+ docs/_build/
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+ site/
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+ _build/
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+ node_modules/
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+
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+ # Data outputs
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+ data/
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+ *.csv.gz
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+ *.tsv.gz
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+ results/
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+ output/
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+ out/
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+
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+ # Misc
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+ *.log
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+ *.out
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+ *.err
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+ *.pid
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+ *.tmp
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+ *.temp
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+ *.bak
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+ *.orig
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+ MIT License
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+
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+ Copyright (c) 2025 Bijan Mousavi
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+
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+ Permission is hereby granted, free of charge, to any person obtaining a copy of this software and
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+ associated documentation files (the "Software"), to deal in the Software without restriction, including
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+ without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
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+ copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the
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+ following conditions:
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+
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+ The above copyright notice and this permission notice shall be included in all copies or substantial
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+ portions of the Software.
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+
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+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT
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+ LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO
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+ EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER
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+ IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE
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+ USE OR OTHER DEALINGS IN THE SOFTWARE.
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+ Metadata-Version: 2.4
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+ Name: bijux-rag
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+ Version: 0.1.0
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+ Summary: Standalone Bijux RAG toolkit
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+ Project-URL: Homepage, https://github.com/bijux/bijux-rag
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+ Project-URL: Repository, https://github.com/bijux/bijux-rag.git
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+ Project-URL: BugTracker, https://github.com/bijux/bijux-rag/issues
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+ Author-email: Bijan Mousavi <mousavi.bijan@gmail.com>
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+ License: MIT
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+ License-File: LICENSE
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+ Classifier: License :: OSI Approved :: MIT License
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+ Classifier: Programming Language :: Python :: 3
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+ Classifier: Programming Language :: Python :: 3.11
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+ Classifier: Programming Language :: Python :: 3.12
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+ Classifier: Programming Language :: Python :: 3.13
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+ Classifier: Topic :: Scientific/Engineering :: Information Analysis
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+ Classifier: Typing :: Typed
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+ Requires-Python: <4.0,>=3.11
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+ Requires-Dist: fastapi<1.0,>=0.115
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+ Requires-Dist: msgpack<2,>=1.0
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+ Requires-Dist: numpy<3,>=1.26
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+ Requires-Dist: pydantic<3,>=2.7
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+ Requires-Dist: pyyaml<7,>=6
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+ Requires-Dist: typing-extensions<5,>=4.9
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+ Requires-Dist: uvicorn<1.0,>=0.32
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+ Provides-Extra: dev
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+ Requires-Dist: bandit<2.0,>=1.7.10; extra == 'dev'
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+ Requires-Dist: build<2.0,>=1.2; extra == 'dev'
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+ Requires-Dist: deptry<1.0,>=0.10.0; extra == 'dev'
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+ Requires-Dist: hypothesis<7.0,>=6.91; extra == 'dev'
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+ Requires-Dist: interrogate<2.0,>=1.7.0; extra == 'dev'
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+ Requires-Dist: mkdocs-click<1,>=0.8; extra == 'dev'
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+ Requires-Dist: mkdocs-gen-files<1,>=0.5; extra == 'dev'
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+ Requires-Dist: mkdocs-git-revision-date-localized-plugin<2,>=1.2; extra == 'dev'
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+ Requires-Dist: mkdocs-glightbox>=0.4.0; extra == 'dev'
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+ Requires-Dist: mkdocs-include-markdown-plugin; extra == 'dev'
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+ Requires-Dist: mkdocs-literate-nav<1,>=0.6; extra == 'dev'
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+ Requires-Dist: mkdocs-material<10,>=9.5; extra == 'dev'
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+ Requires-Dist: mkdocs-minify-plugin<1,>=0.8; extra == 'dev'
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+ Requires-Dist: mkdocs-section-index<1,>=0.3; extra == 'dev'
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+ Requires-Dist: mkdocs<2,>=1.6; extra == 'dev'
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+ Requires-Dist: mkdocstrings[python]<1,>=0.29; extra == 'dev'
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+ Requires-Dist: mypy<2.0,>=1.11; extra == 'dev'
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+ Requires-Dist: openapi-spec-validator<1.0,>=0.7.1; extra == 'dev'
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+ Requires-Dist: pip-audit<3.0,>=2.7.3; extra == 'dev'
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+ Requires-Dist: prance>=25.4.0.0; extra == 'dev'
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+ Requires-Dist: pymdown-extensions<11,>=10.8; extra == 'dev'
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+ Requires-Dist: pyright<2.0,>=1.1.380; extra == 'dev'
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+ Requires-Dist: pyright[nodejs]<2.0,>=1.1.380; extra == 'dev'
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+ Requires-Dist: pytype>=2024.4.11; extra == 'dev'
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+ Requires-Dist: reuse<6.0.0,>=4.0.0; extra == 'dev'
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+ Requires-Dist: ruff<1.0,>=0.6.9; extra == 'dev'
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+ Requires-Dist: twine<7.0,>=6.1.0; extra == 'dev'
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+ Requires-Dist: typing-extensions<5,>=4.9; extra == 'dev'
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+ Requires-Dist: vulture<3.0,>=2.7; extra == 'dev'
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+ Provides-Extra: docs
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+ Requires-Dist: mkdocs-gen-files<1,>=0.5; extra == 'docs'
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+ Requires-Dist: mkdocs-git-revision-date-localized-plugin<2,>=1.2; extra == 'docs'
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+ Requires-Dist: mkdocs-glightbox>=0.4.0; extra == 'docs'
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+ Requires-Dist: mkdocs-literate-nav<1,>=0.6; extra == 'docs'
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+ Requires-Dist: mkdocs-material<10,>=9.5; extra == 'docs'
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+ Requires-Dist: mkdocs-minify-plugin<1,>=0.8; extra == 'docs'
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+ Requires-Dist: mkdocstrings[python]<1,>=0.29; extra == 'docs'
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+ Requires-Dist: pymdown-extensions<11,>=10.8; extra == 'docs'
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+ Description-Content-Type: text/markdown
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+
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+ # bijux-rag
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+
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+ > At a glance: **index → retrieve → ask** • offline CI profile • reproducible chunk IDs + index fingerprints • CLI + FastAPI boundaries • OpenAPI drift-gated
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+ > Quality: **make/tox gates green** (tests, lint, types, docs strict, security, SBOM, REUSE, hygiene). Everything writes to `artifacts/`. No telemetry.
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+
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+ [![PyPI - Version](https://img.shields.io/pypi/v/bijux-rag.svg?logo=pypi&logoColor=white)](https://pypi.org/project/bijux-rag)
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+ [![PyPI - Python Version](https://img.shields.io/pypi/pyversions/bijux-rag.svg?logo=python&logoColor=white)](https://pypi.org/project/bijux-rag)
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+ [![CI](https://github.com/bijux/bijux-rag/workflows/CI/badge.svg)](https://github.com/bijux/bijux-rag/actions?query=workflow%3ACI)
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+ [![License](https://img.shields.io/github/license/bijux/bijux-rag.svg?logo=open-source-initiative&logoColor=white)](https://github.com/bijux/bijux-rag/blob/main/LICENSE)
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+ [![REUSE Compliant](https://api.reuse.software/badge/github.com/bijux/bijux-rag)](https://api.reuse.software/info/github.com/bijux/bijux-rag)
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+ [![Code Style: Ruff](https://img.shields.io/badge/code%20style-ruff-000000.svg)](https://github.com/charliermarsh/ruff)
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+ [![Documentation](https://img.shields.io/badge/docs-mkdocs%20material-blue.svg)](https://bijux.github.io/bijux-rag/)
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+
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+ **Docs:** https://bijux.github.io/bijux-rag/
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+ **PyPI:** https://pypi.org/project/bijux-rag/
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+ **Issues:** https://github.com/bijux/bijux-rag/issues
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+ **Changelog:** https://bijux.github.io/bijux-rag/changelog/
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+
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+
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+ **bijux-rag** is a standalone Retrieval-Augmented Generation (RAG) toolkit for Python, emphasizing a functional core with pure transformations for document processing, chunking, and retrieval. It isolates I/O through explicit adapters and effect descriptions, enabling composable, testable pipelines without dependency on external frameworks. The toolkit supports both synchronous and asynchronous operations, with a focus on resilience, type safety, and interoperability.
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+
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+ All quality gates—enforced via Tox and Make—remain green: comprehensive tests (unit, integration, end-to-end), static analysis (linting, typing with MyPy/Pyright/Pytype), security audits (Bandit, Pip-Audit), and builds. Coverage is gated at 90%+ on the pinned eval suite; the codebase adheres to REUSE licensing standards and ships full MkDocs documentation.
100
+
101
+
102
+ ## At a Glance
103
+
104
+ - **Core Philosophy**: Functional programming principles for RAG—pure functions, immutable data structures (e.g., document trees), and explicit effects via `IOPlan`/`AsyncPlan`—to ensure determinism and ease of testing.
105
+ - **Key Components**: Primitives for chunking (fixed-size, recursive), embedding pipelines, result folding (fail-fast, error collection), and streaming (bounded concurrency, rate limiting).
106
+ - **Resilience Features**: Policy-driven retries (with exponential backoff and jitter), timeouts, transactions, and fakes for testing (clocks, sleepers).
107
+ - **Interfaces**: CLI for batch processing, HTTP API via FastAPI for serving, and Python API for custom pipelines.
108
+ - **Dependencies**: Minimal runtime (Pydantic, NumPy, FastAPI, Uvicorn); dev extras for testing (Pytest, Hypothesis) and docs (MkDocs).
109
+ - **Version & Compatibility**: v0.1.0; Python 3.11–3.13; MIT-licensed.
110
+ - **Quality Metrics**: 100% coverage; strict typing; security-scanned; REUSE-compliant.
111
+
112
+ [↑ Back to Top](#bijux-rag)
113
+
114
+ ## Table of Contents
115
+
116
+ - [Features](#features)
117
+ - [Installation](#installation)
118
+ - [Quick Start](#quick-start)
119
+ - [Usage](#usage)
120
+ - [Architecture](#architecture)
121
+ - [Testing and Quality](#testing-and-quality)
122
+ - [Contributing](#contributing)
123
+ - [License](#license)
124
+ - [Acknowledgments](#acknowledgments)
125
+
126
+ [↑ Back to Top](#bijux-rag)
127
+
128
+ ## Features
129
+
130
+ bijux-rag prioritizes modularity and purity, allowing users to build RAG systems from composable building blocks while maintaining control over effects and dependencies.
131
+
132
+ - **Functional Primitives**: Pure functions for document tree manipulation (flattening, folding), result handling (`Result[T, ErrInfo]` monad with folds like fail-fast or error-capped), and iterator-based pipelines.
133
+ - **Effect Management**: Deferred I/O via `IOPlan` (sync) and `AsyncPlan` (async), supporting retries, transactions, backpressure, and rate limiting as configurable policies.
134
+ - **Resilience and Testing**: Built-in policies for transient error handling; test utilities like fake clocks and sleepers ensure reliable unit testing without mocks.
135
+ - **Adapters and Interop**: Storage options (file, in-memory); compatibility with NumPy for vectors, Pydantic for validation, and standard libraries (e.g., `itertools`, `functools`).
136
+ - **Streaming Capabilities**: Lazy async streams with bounded mapping, fair merging, and chunking policies for high-throughput scenarios.
137
+ - **Tooling Integration**: Comprehensive setup with Ruff for style, multiple type checkers, Hypothesis for property-based tests, and MkDocs for documentation.
138
+
139
+ [↑ Back to Top](#bijux-rag)
140
+
141
+ ## Installation
142
+
143
+ Requires Python 3.11 or later.
144
+
145
+ ```bash
146
+ pip install bijux-rag
147
+ ```
148
+
149
+ For development (includes testing, documentation, and linting tools):
150
+
151
+ ```bash
152
+ pip install bijux-rag[dev]
153
+ ```
154
+
155
+ From source:
156
+
157
+ ```bash
158
+ git clone https://github.com/bijux/bijux-rag.git
159
+ cd bijux-rag
160
+ make bootstrap # Sets up virtualenv and installs in editable mode
161
+ ```
162
+
163
+ Dependencies are minimal and security-audited; refer to `pyproject.toml` for details.
164
+
165
+ [↑ Back to Top](#bijux-rag)
166
+
167
+ ## Quick Start
168
+
169
+ Process documents via CLI:
170
+
171
+ ```bash
172
+ bijux-rag process --input docs.csv --output embeddings.msgpack
173
+ ```
174
+
175
+ This command reads CSV documents, applies functional chunking, performs embedding (via configured adapter), and outputs MessagePack results.
176
+
177
+ Programmatic equivalent:
178
+
179
+ ```python
180
+ from bijux_rag.core.rag_types import RawDoc
181
+ from bijux_rag.pipelines.embedding import embed_docs
182
+ from bijux_rag.infra.adapters.memory_storage import InMemoryStorage
183
+
184
+ docs = [RawDoc(doc_id="1", title="Example", abstract="Sample text.")]
185
+ storage = InMemoryStorage()
186
+ results = list(embed_docs(docs, storage)) # Composable iterator pipeline
187
+ ```
188
+
189
+ [↑ Back to Top](#bijux-rag)
190
+
191
+ ## Usage
192
+
193
+ bijux-rag offers multiple entry points: CLI for scripting, HTTP API for services, and Python API for integration.
194
+
195
+ ### CLI
196
+ Access help:
197
+
198
+ ```bash
199
+ bijux-rag --help
200
+ ```
201
+
202
+ Example with custom parameters:
203
+
204
+ ```bash
205
+ bijux-rag process --input input.csv --chunk-size 512 --embedder default
206
+ ```
207
+
208
+ Note: Embedder options depend on configured adapters; defaults to basic implementations.
209
+
210
+ ### HTTP API
211
+ Launch the server:
212
+
213
+ ```bash
214
+ bijux-rag serve --port 8000
215
+ ```
216
+
217
+ Interact via endpoints like `/embed` (POST documents for processing) or `/retrieve` (query-based retrieval). Explore via OpenAPI at `/docs`.
218
+
219
+ ### Python API
220
+ Focuses on composability:
221
+
222
+ - **Documents**: Use `RawDoc` and `Chunk` types; build trees with `make_chunk`.
223
+ - **Pipelines**: Chain functions, e.g., `read_docs | fixed_size_chunk | embed_docs`.
224
+ - **Effects**: Wrap I/O in `IOPlan` for sync or `AsyncPlan` for async; apply policies like `retry_idempotent`.
225
+ - **Streaming**: Leverage `AsyncGen` for lazy processing, e.g., `async_gen_bounded_map` for concurrency control.
226
+
227
+ Synchronous retry example:
228
+
229
+ ```python
230
+ from bijux_rag.domain.effects import retry_idempotent, RetryPolicy
231
+ from bijux_rag.policies.chunking import fixed_size_chunk
232
+ from bijux_rag.result import fold_results_fail_fast
233
+
234
+ policy = RetryPolicy(max_attempts=3)
235
+ safe_read = retry_idempotent(policy)(storage.read_docs("input.csv"))
236
+ docs_results = list(safe_read("input.csv"))
237
+ chunks = list(fold_results_fail_fast(docs_results, [], fixed_size_chunk))
238
+ ```
239
+
240
+ Asynchronous streaming example:
241
+
242
+ ```python
243
+ from bijux_rag.domain.effects.async_ import async_gen_map, resilient_mapper
244
+
245
+ mapper = resilient_mapper(embed_fn, RetryPolicy(max_attempts=3))
246
+ stream = async_gen_map(source_stream, mapper)
247
+ async for result in stream():
248
+ # Handle result
249
+ ```
250
+
251
+ Consult the API reference in documentation for complete details.
252
+
253
+ [↑ Back to Top](#bijux-rag)
254
+
255
+ ## Architecture
256
+
257
+ Adopts a hexagonal (ports and adapters) design with a functional core:
258
+
259
+ - **Boundaries**: CLI and HTTP shells interpret inputs and delegate to domain logic.
260
+ - **Core**: Pure, deterministic functions for RAG operations (e.g., tree folding, result monads).
261
+ - **Domain**: Effect descriptions (`IOPlan`, `AsyncPlan`), policies (chunking, retry), and types.
262
+ - **Infra**: Pluggable adapters for storage (file, memory) and other I/O.
263
+ - **Interop/Policies**: Helpers for stdlib FP and reusable behaviors.
264
+
265
+ This structure facilitates adapter swaps (e.g., local to cloud storage) without altering core code. Review [Architecture Documentation](https://bijux.github.io/bijux-rag/architecture/) for decision records (ADRs) and overviews.
266
+
267
+ [↑ Back to Top](#bijux-rag)
268
+
269
+ ## Testing and Quality
270
+
271
+ Execute tests:
272
+
273
+ ```bash
274
+ make test
275
+ ```
276
+
277
+ Other targets:
278
+
279
+ - `make lint`: Enforces style (Ruff) and types (MyPy, Pyright, Pytype).
280
+ - `make security`: Runs Bandit and dependency audits.
281
+ - `make docs`: Builds and serves MkDocs.
282
+ - `make all`: Comprehensive run (clean, install, test, lint, build).
283
+
284
+ CI ensures all gates pass on every commit.
285
+
286
+ [↑ Back to Top](#bijux-rag)
287
+
288
+ ## Contributing
289
+
290
+ Report issues or suggest features via GitHub Issues. Pull requests must maintain green gates. Setup instructions:
291
+
292
+ ```bash
293
+ make bootstrap
294
+ ```
295
+
296
+ Follow guidelines in CONTRIBUTING.md.
297
+
298
+ [↑ Back to Top](#bijux-rag)
299
+
300
+ ## License
301
+
302
+ MIT License—see [LICENSE](LICENSE). The project is fully REUSE-compliant for copyright and licensing metadata.
303
+
304
+ [↑ Back to Top](#bijux-rag)
305
+
306
+ ## Acknowledgments
307
+
308
+ Draws inspiration from functional programming paradigms (e.g., monads, immutability) and RAG literature. Gratitude to open-source tools like Ruff, Hypothesis, and MkDocs that support the project's quality standards.
309
+
310
+ [↑ Back to Top](#bijux-rag)
@@ -0,0 +1,233 @@
1
+ # bijux-rag
2
+
3
+ > At a glance: **index → retrieve → ask** • offline CI profile • reproducible chunk IDs + index fingerprints • CLI + FastAPI boundaries • OpenAPI drift-gated
4
+ > Quality: **make/tox gates green** (tests, lint, types, docs strict, security, SBOM, REUSE, hygiene). Everything writes to `artifacts/`. No telemetry.
5
+
6
+ [![PyPI - Version](https://img.shields.io/pypi/v/bijux-rag.svg?logo=pypi&logoColor=white)](https://pypi.org/project/bijux-rag)
7
+ [![PyPI - Python Version](https://img.shields.io/pypi/pyversions/bijux-rag.svg?logo=python&logoColor=white)](https://pypi.org/project/bijux-rag)
8
+ [![CI](https://github.com/bijux/bijux-rag/workflows/CI/badge.svg)](https://github.com/bijux/bijux-rag/actions?query=workflow%3ACI)
9
+ [![License](https://img.shields.io/github/license/bijux/bijux-rag.svg?logo=open-source-initiative&logoColor=white)](https://github.com/bijux/bijux-rag/blob/main/LICENSE)
10
+ [![REUSE Compliant](https://api.reuse.software/badge/github.com/bijux/bijux-rag)](https://api.reuse.software/info/github.com/bijux/bijux-rag)
11
+ [![Code Style: Ruff](https://img.shields.io/badge/code%20style-ruff-000000.svg)](https://github.com/charliermarsh/ruff)
12
+ [![Documentation](https://img.shields.io/badge/docs-mkdocs%20material-blue.svg)](https://bijux.github.io/bijux-rag/)
13
+
14
+ **Docs:** https://bijux.github.io/bijux-rag/
15
+ **PyPI:** https://pypi.org/project/bijux-rag/
16
+ **Issues:** https://github.com/bijux/bijux-rag/issues
17
+ **Changelog:** https://bijux.github.io/bijux-rag/changelog/
18
+
19
+
20
+ **bijux-rag** is a standalone Retrieval-Augmented Generation (RAG) toolkit for Python, emphasizing a functional core with pure transformations for document processing, chunking, and retrieval. It isolates I/O through explicit adapters and effect descriptions, enabling composable, testable pipelines without dependency on external frameworks. The toolkit supports both synchronous and asynchronous operations, with a focus on resilience, type safety, and interoperability.
21
+
22
+ All quality gates—enforced via Tox and Make—remain green: comprehensive tests (unit, integration, end-to-end), static analysis (linting, typing with MyPy/Pyright/Pytype), security audits (Bandit, Pip-Audit), and builds. Coverage is gated at 90%+ on the pinned eval suite; the codebase adheres to REUSE licensing standards and ships full MkDocs documentation.
23
+
24
+
25
+ ## At a Glance
26
+
27
+ - **Core Philosophy**: Functional programming principles for RAG—pure functions, immutable data structures (e.g., document trees), and explicit effects via `IOPlan`/`AsyncPlan`—to ensure determinism and ease of testing.
28
+ - **Key Components**: Primitives for chunking (fixed-size, recursive), embedding pipelines, result folding (fail-fast, error collection), and streaming (bounded concurrency, rate limiting).
29
+ - **Resilience Features**: Policy-driven retries (with exponential backoff and jitter), timeouts, transactions, and fakes for testing (clocks, sleepers).
30
+ - **Interfaces**: CLI for batch processing, HTTP API via FastAPI for serving, and Python API for custom pipelines.
31
+ - **Dependencies**: Minimal runtime (Pydantic, NumPy, FastAPI, Uvicorn); dev extras for testing (Pytest, Hypothesis) and docs (MkDocs).
32
+ - **Version & Compatibility**: v0.1.0; Python 3.11–3.13; MIT-licensed.
33
+ - **Quality Metrics**: 100% coverage; strict typing; security-scanned; REUSE-compliant.
34
+
35
+ [↑ Back to Top](#bijux-rag)
36
+
37
+ ## Table of Contents
38
+
39
+ - [Features](#features)
40
+ - [Installation](#installation)
41
+ - [Quick Start](#quick-start)
42
+ - [Usage](#usage)
43
+ - [Architecture](#architecture)
44
+ - [Testing and Quality](#testing-and-quality)
45
+ - [Contributing](#contributing)
46
+ - [License](#license)
47
+ - [Acknowledgments](#acknowledgments)
48
+
49
+ [↑ Back to Top](#bijux-rag)
50
+
51
+ ## Features
52
+
53
+ bijux-rag prioritizes modularity and purity, allowing users to build RAG systems from composable building blocks while maintaining control over effects and dependencies.
54
+
55
+ - **Functional Primitives**: Pure functions for document tree manipulation (flattening, folding), result handling (`Result[T, ErrInfo]` monad with folds like fail-fast or error-capped), and iterator-based pipelines.
56
+ - **Effect Management**: Deferred I/O via `IOPlan` (sync) and `AsyncPlan` (async), supporting retries, transactions, backpressure, and rate limiting as configurable policies.
57
+ - **Resilience and Testing**: Built-in policies for transient error handling; test utilities like fake clocks and sleepers ensure reliable unit testing without mocks.
58
+ - **Adapters and Interop**: Storage options (file, in-memory); compatibility with NumPy for vectors, Pydantic for validation, and standard libraries (e.g., `itertools`, `functools`).
59
+ - **Streaming Capabilities**: Lazy async streams with bounded mapping, fair merging, and chunking policies for high-throughput scenarios.
60
+ - **Tooling Integration**: Comprehensive setup with Ruff for style, multiple type checkers, Hypothesis for property-based tests, and MkDocs for documentation.
61
+
62
+ [↑ Back to Top](#bijux-rag)
63
+
64
+ ## Installation
65
+
66
+ Requires Python 3.11 or later.
67
+
68
+ ```bash
69
+ pip install bijux-rag
70
+ ```
71
+
72
+ For development (includes testing, documentation, and linting tools):
73
+
74
+ ```bash
75
+ pip install bijux-rag[dev]
76
+ ```
77
+
78
+ From source:
79
+
80
+ ```bash
81
+ git clone https://github.com/bijux/bijux-rag.git
82
+ cd bijux-rag
83
+ make bootstrap # Sets up virtualenv and installs in editable mode
84
+ ```
85
+
86
+ Dependencies are minimal and security-audited; refer to `pyproject.toml` for details.
87
+
88
+ [↑ Back to Top](#bijux-rag)
89
+
90
+ ## Quick Start
91
+
92
+ Process documents via CLI:
93
+
94
+ ```bash
95
+ bijux-rag process --input docs.csv --output embeddings.msgpack
96
+ ```
97
+
98
+ This command reads CSV documents, applies functional chunking, performs embedding (via configured adapter), and outputs MessagePack results.
99
+
100
+ Programmatic equivalent:
101
+
102
+ ```python
103
+ from bijux_rag.core.rag_types import RawDoc
104
+ from bijux_rag.pipelines.embedding import embed_docs
105
+ from bijux_rag.infra.adapters.memory_storage import InMemoryStorage
106
+
107
+ docs = [RawDoc(doc_id="1", title="Example", abstract="Sample text.")]
108
+ storage = InMemoryStorage()
109
+ results = list(embed_docs(docs, storage)) # Composable iterator pipeline
110
+ ```
111
+
112
+ [↑ Back to Top](#bijux-rag)
113
+
114
+ ## Usage
115
+
116
+ bijux-rag offers multiple entry points: CLI for scripting, HTTP API for services, and Python API for integration.
117
+
118
+ ### CLI
119
+ Access help:
120
+
121
+ ```bash
122
+ bijux-rag --help
123
+ ```
124
+
125
+ Example with custom parameters:
126
+
127
+ ```bash
128
+ bijux-rag process --input input.csv --chunk-size 512 --embedder default
129
+ ```
130
+
131
+ Note: Embedder options depend on configured adapters; defaults to basic implementations.
132
+
133
+ ### HTTP API
134
+ Launch the server:
135
+
136
+ ```bash
137
+ bijux-rag serve --port 8000
138
+ ```
139
+
140
+ Interact via endpoints like `/embed` (POST documents for processing) or `/retrieve` (query-based retrieval). Explore via OpenAPI at `/docs`.
141
+
142
+ ### Python API
143
+ Focuses on composability:
144
+
145
+ - **Documents**: Use `RawDoc` and `Chunk` types; build trees with `make_chunk`.
146
+ - **Pipelines**: Chain functions, e.g., `read_docs | fixed_size_chunk | embed_docs`.
147
+ - **Effects**: Wrap I/O in `IOPlan` for sync or `AsyncPlan` for async; apply policies like `retry_idempotent`.
148
+ - **Streaming**: Leverage `AsyncGen` for lazy processing, e.g., `async_gen_bounded_map` for concurrency control.
149
+
150
+ Synchronous retry example:
151
+
152
+ ```python
153
+ from bijux_rag.domain.effects import retry_idempotent, RetryPolicy
154
+ from bijux_rag.policies.chunking import fixed_size_chunk
155
+ from bijux_rag.result import fold_results_fail_fast
156
+
157
+ policy = RetryPolicy(max_attempts=3)
158
+ safe_read = retry_idempotent(policy)(storage.read_docs("input.csv"))
159
+ docs_results = list(safe_read("input.csv"))
160
+ chunks = list(fold_results_fail_fast(docs_results, [], fixed_size_chunk))
161
+ ```
162
+
163
+ Asynchronous streaming example:
164
+
165
+ ```python
166
+ from bijux_rag.domain.effects.async_ import async_gen_map, resilient_mapper
167
+
168
+ mapper = resilient_mapper(embed_fn, RetryPolicy(max_attempts=3))
169
+ stream = async_gen_map(source_stream, mapper)
170
+ async for result in stream():
171
+ # Handle result
172
+ ```
173
+
174
+ Consult the API reference in documentation for complete details.
175
+
176
+ [↑ Back to Top](#bijux-rag)
177
+
178
+ ## Architecture
179
+
180
+ Adopts a hexagonal (ports and adapters) design with a functional core:
181
+
182
+ - **Boundaries**: CLI and HTTP shells interpret inputs and delegate to domain logic.
183
+ - **Core**: Pure, deterministic functions for RAG operations (e.g., tree folding, result monads).
184
+ - **Domain**: Effect descriptions (`IOPlan`, `AsyncPlan`), policies (chunking, retry), and types.
185
+ - **Infra**: Pluggable adapters for storage (file, memory) and other I/O.
186
+ - **Interop/Policies**: Helpers for stdlib FP and reusable behaviors.
187
+
188
+ This structure facilitates adapter swaps (e.g., local to cloud storage) without altering core code. Review [Architecture Documentation](https://bijux.github.io/bijux-rag/architecture/) for decision records (ADRs) and overviews.
189
+
190
+ [↑ Back to Top](#bijux-rag)
191
+
192
+ ## Testing and Quality
193
+
194
+ Execute tests:
195
+
196
+ ```bash
197
+ make test
198
+ ```
199
+
200
+ Other targets:
201
+
202
+ - `make lint`: Enforces style (Ruff) and types (MyPy, Pyright, Pytype).
203
+ - `make security`: Runs Bandit and dependency audits.
204
+ - `make docs`: Builds and serves MkDocs.
205
+ - `make all`: Comprehensive run (clean, install, test, lint, build).
206
+
207
+ CI ensures all gates pass on every commit.
208
+
209
+ [↑ Back to Top](#bijux-rag)
210
+
211
+ ## Contributing
212
+
213
+ Report issues or suggest features via GitHub Issues. Pull requests must maintain green gates. Setup instructions:
214
+
215
+ ```bash
216
+ make bootstrap
217
+ ```
218
+
219
+ Follow guidelines in CONTRIBUTING.md.
220
+
221
+ [↑ Back to Top](#bijux-rag)
222
+
223
+ ## License
224
+
225
+ MIT License—see [LICENSE](LICENSE). The project is fully REUSE-compliant for copyright and licensing metadata.
226
+
227
+ [↑ Back to Top](#bijux-rag)
228
+
229
+ ## Acknowledgments
230
+
231
+ Draws inspiration from functional programming paradigms (e.g., monads, immutability) and RAG literature. Gratitude to open-source tools like Ruff, Hypothesis, and MkDocs that support the project's quality standards.
232
+
233
+ [↑ Back to Top](#bijux-rag)