bigraph-schema 0.0.71__tar.gz → 0.0.73__tar.gz

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Files changed (37) hide show
  1. {bigraph_schema-0.0.71/bigraph_schema.egg-info → bigraph_schema-0.0.73}/PKG-INFO +1 -1
  2. {bigraph_schema-0.0.71 → bigraph_schema-0.0.73/bigraph_schema.egg-info}/PKG-INFO +1 -1
  3. {bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/pyproject.toml +1 -1
  4. {bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/release.sh +18 -7
  5. {bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/setup.py +2 -2
  6. {bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/.github/workflows/notebook_to_html.yml +0 -0
  7. {bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/.github/workflows/pytest.yml +0 -0
  8. {bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/.gitignore +0 -0
  9. {bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/AUTHORS.md +0 -0
  10. {bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/CLA.md +0 -0
  11. {bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/CODE_OF_CONDUCT.md +0 -0
  12. {bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/CONTRIBUTING.md +0 -0
  13. {bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/LICENSE +0 -0
  14. {bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/README.md +0 -0
  15. {bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/bigraph_schema/__init__.py +0 -0
  16. {bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/bigraph_schema/edge.py +0 -0
  17. {bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/bigraph_schema/parse.py +0 -0
  18. {bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/bigraph_schema/protocols.py +0 -0
  19. {bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/bigraph_schema/registry.py +0 -0
  20. {bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/bigraph_schema/tests.py +0 -0
  21. {bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/bigraph_schema/type_functions.py +0 -0
  22. {bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/bigraph_schema/type_system.py +0 -0
  23. {bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/bigraph_schema/type_system_adjunct.py +0 -0
  24. {bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/bigraph_schema/units.py +0 -0
  25. {bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/bigraph_schema/utilities.py +0 -0
  26. {bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/bigraph_schema.egg-info/SOURCES.txt +0 -0
  27. {bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/bigraph_schema.egg-info/dependency_links.txt +0 -0
  28. {bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/bigraph_schema.egg-info/requires.txt +0 -0
  29. {bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/bigraph_schema.egg-info/top_level.txt +0 -0
  30. {bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/notebooks/core.ipynb +0 -0
  31. {bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/notebooks/demo.ipynb +0 -0
  32. {bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/notebooks/images/place-link.png +0 -0
  33. {bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/notebooks/images/reaction-after.png +0 -0
  34. {bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/notebooks/images/reaction-before.png +0 -0
  35. {bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/notebooks/images/redex-reactum.png +0 -0
  36. {bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/pytest.ini +0 -0
  37. {bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/setup.cfg +0 -0
{bigraph_schema-0.0.71/bigraph_schema.egg-info → bigraph_schema-0.0.73}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: bigraph-schema
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- Version: 0.0.71
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+ Version: 0.0.73
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  Summary: A serializable type schema for compositional systems biology
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  Author: Eran Agmon, Ryan Spangler
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  Requires-Python: >=3.7
{bigraph_schema-0.0.71 → bigraph_schema-0.0.73/bigraph_schema.egg-info}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: bigraph-schema
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- Version: 0.0.71
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+ Version: 0.0.73
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  Summary: A serializable type schema for compositional systems biology
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  Author: Eran Agmon, Ryan Spangler
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  Requires-Python: >=3.7
{bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/pyproject.toml RENAMED
@@ -1,6 +1,6 @@
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  [project]
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  name = "bigraph-schema"
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- version = "0.0.71"
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+ version = "0.0.73"
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  description = "A serializable type schema for compositional systems biology"
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  readme = "README.md"
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  requires-python = ">=3.7"
{bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/release.sh RENAMED
@@ -4,9 +4,9 @@
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  # matching PyPI.
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  # Usage: ./release.sh 0.0.1
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- set -e
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+ # set -e
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- version="$1"
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+ # version="$1"
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  # # Check version is valid
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  # setup_py_version="$(python setup.py --version)"
@@ -31,13 +31,24 @@ if [ "$branch" != "main" ]; then
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  exit 1
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  fi
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+ rm -rf build/ dist/
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+ uv version --bump patch
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+ version=$(uv version --short)
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+
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  # Create and push git tag
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- git tag -m "Version v$version" "v$version"
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+ git add pyproject.toml
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+ git commit -m "version $version"
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+ git tag -m "version v$version" "v$version"
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  git push --tags
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- # Create and publish package
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- rm -rf dist
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- python setup.py sdist
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- twine upload dist/*
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+ uv build
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+ uv publish --token $(cat ~/.pypi-token)
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+ rm -rf build/ dist/
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+
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+
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+ # # Create and publish package
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+ # rm -rf dist
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+ # python setup.py sdist
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+ # twine upload dist/*
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  echo "Version v$version has been published on PyPI and has a git tag."
{bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/setup.py RENAMED
@@ -1,7 +1,7 @@
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  from setuptools import setup, find_packages
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- VERSION = '0.0.71'
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+ # VERSION = '0.0.71'
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  with open("README.md", "r") as readme:
@@ -10,6 +10,6 @@ with open("README.md", "r") as readme:
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  setup(
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  name="bigraph-schema",
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- version=VERSION,
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+ # version=VERSION,
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  author="Eran Agmon, Ryan Spangler",
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  )
{bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/CLA.md RENAMED
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{bigraph_schema-0.0.71 → bigraph_schema-0.0.73}/LICENSE RENAMED
File without changes