bella-companion 0.0.15__tar.gz → 0.0.16__tar.gz
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- {bella_companion-0.0.15 → bella_companion-0.0.16}/PKG-INFO +2 -2
- {bella_companion-0.0.15 → bella_companion-0.0.16}/pyproject.toml +2 -2
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/__init__.py +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/cli.py +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/fbd_empirical/__init__.py +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/fbd_empirical/__pycache__/run_beast.cpython-311.pyc +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/fbd_empirical/__pycache__/run_mlp.cpython-311.pyc +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/fbd_empirical/__pycache__/run_nonparametric.cpython-311.pyc +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/fbd_empirical/__pycache__/summarize_logs.cpython-311.pyc +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/fbd_empirical/beast_config.xml +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/fbd_empirical/data/change_times.csv +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/fbd_empirical/data/traits.csv +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/fbd_empirical/data/trees.nwk +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/fbd_empirical/results.py +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/fbd_empirical/run_beast.py +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/fbd_empirical/summarize_logs.py +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/__init__.py +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/__pycache__/__init__.cpython-310.pyc +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/__pycache__/__init__.cpython-311.pyc +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/__pycache__/features.cpython-310.pyc +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/__pycache__/features.cpython-311.pyc +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/__pycache__/generate_data.cpython-310.pyc +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/__pycache__/generate_data.cpython-311.pyc +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/__pycache__/run_beast.cpython-311.pyc +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/__pycache__/summarize_logs.cpython-311.pyc +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/beast_configs/epi-multitype/GLM.xml +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/beast_configs/epi-multitype/MLP.xml +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/beast_configs/epi-multitype/Nonparametric.xml +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/beast_configs/epi-skyline/GLM.xml +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/beast_configs/epi-skyline/MLP.xml +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/beast_configs/epi-skyline/Nonparametric.xml +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/beast_configs/fbd-2traits/GLM.xml +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/beast_configs/fbd-2traits/MLP.xml +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/beast_configs/fbd-2traits/Nonparametric.xml +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/beast_configs/fbd-no-traits/GLM.xml +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/beast_configs/fbd-no-traits/MLP.xml +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/beast_configs/fbd-no-traits/Nonparametric.xml +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/features.py +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/figures/__init__.py +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/figures/__pycache__/__init__.cpython-311.pyc +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/figures/__pycache__/epi_explainations.cpython-311.pyc +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/figures/__pycache__/epi_predictions.cpython-311.pyc +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/figures/__pycache__/epi_simulations.cpython-311.pyc +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/figures/__pycache__/fbd_explainations.cpython-311.pyc +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/figures/__pycache__/fbd_predictions.cpython-311.pyc +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/figures/__pycache__/fbd_simulations.cpython-311.pyc +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/figures/__pycache__/figure1.cpython-311.pyc +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/figures/__pycache__/plot.cpython-311.pyc +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/figures/__pycache__/scenarios.cpython-311.pyc +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/figures/__pycache__/utils.cpython-311.pyc +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/figures/epi_multitype_results.py +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/figures/epi_skyline_results.py +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/figures/explain/__init__.py +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/figures/explain/pdp.py +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/figures/explain/shap.py +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/figures/fbd_2traits_results.py +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/figures/fbd_no_traits_results.py +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/figures/scenarios.py +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/figures/utils.py +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/generate_data.py +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/generate_figures.py +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/metrics.py +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/run_beast.py +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/scenarios/__init__.py +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/scenarios/__pycache__/__init__.cpython-310.pyc +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/scenarios/__pycache__/__init__.cpython-311.pyc +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/scenarios/__pycache__/common.cpython-310.pyc +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/scenarios/__pycache__/common.cpython-311.pyc +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/scenarios/__pycache__/epi_multitype.cpython-310.pyc +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/scenarios/__pycache__/epi_multitype.cpython-311.pyc +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/scenarios/__pycache__/epi_skyline.cpython-310.pyc +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/scenarios/__pycache__/epi_skyline.cpython-311.pyc +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/scenarios/__pycache__/fbd_2traits.cpython-310.pyc +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/scenarios/__pycache__/fbd_2traits.cpython-311.pyc +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/scenarios/__pycache__/fbd_no_traits.cpython-310.pyc +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/scenarios/__pycache__/fbd_no_traits.cpython-311.pyc +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/scenarios/__pycache__/scenario.cpython-310.pyc +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/scenarios/__pycache__/scenario.cpython-311.pyc +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/scenarios/__pycache__/utils.cpython-311.pyc +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/scenarios/common.py +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/scenarios/epi_multitype.py +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/scenarios/epi_skyline.py +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/scenarios/fbd_2traits.py +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/scenarios/fbd_no_traits.py +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/scenarios/scenario.py +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/simulations/summarize_logs.py +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/utils/__init__.py +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/utils/beast.py +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/utils/explain.py +0 -0
- {bella_companion-0.0.15 → bella_companion-0.0.16}/bella_companion/utils/slurm.py +0 -0
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Name: bella-companion
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Version: 0.0.
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Version: 0.0.16
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Summary:
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Author: gabriele-marino
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Author-email: gabmarino.8601@gmail.com
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Requires-Dist: arviz (>=0.22.0,<0.23.0)
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Requires-Dist: bella-lumiere (>=0.0.14,<0.0.15)
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Requires-Dist: dotenv (>=0.9.9,<0.10.0)
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[tool.poetry]
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name = "bella-companion"
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version = "0.0.
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version = "0.0.16"
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description = ""
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authors = ["gabriele-marino <gabmarino.8601@gmail.com>"]
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