basalt-mesh 0.1__tar.gz

basalt_mesh-0.1/.gitattributes

@@ -0,0 +1,4 @@
+# SCM syntax highlighting & preventing 3-way merges
+pixi.lock merge=binary linguist-language=YAML linguist-generated=true
+tests/data/*.x_t filter=lfs diff=lfs merge=lfs -text
+tests/data/*.step filter=lfs diff=lfs merge=lfs -text

basalt_mesh-0.1/.github/ISSUE_TEMPLATE/bug.md

@@ -0,0 +1,34 @@
+---
+name: Bug report
+about: Report a bug or unexpected behaviour
+title: "[bug] "
+labels: bug
+---
+
+## Description
+
+A clear description of the bug.
+
+## To reproduce
+
+Minimal, self-contained example. Include the input geometry if possible.
+
+```python
+import basalt
+# ...
+```
+
+## Expected behaviour
+
+What you expected to happen.
+
+## Actual behaviour
+
+What actually happened. Include the full traceback or error output.
+
+## Environment
+
+- basalt version: <!-- python -c "import basalt; print(basalt.__version__)" -->
+- Simmetrix SimModSuite version: <!-- e.g. 2025.0-250920 -->
+- Python version: <!-- python --version -->
+- OS / glibc: <!-- e.g. Ubuntu 24.04, glibc 2.39 -->

basalt_mesh-0.1/.github/ISSUE_TEMPLATE/feature.md

@@ -0,0 +1,22 @@
+---
+name: Feature request
+about: Propose a new feature or enhancement
+title: "[feature] "
+labels: enhancement
+---
+
+## Use case
+
+What are you trying to accomplish?
+
+## Proposed solution
+
+How you imagine this would work in basalt (API sketch, behaviour, etc.).
+
+## Alternatives considered
+
+Any workarounds or alternative approaches you've evaluated.
+
+## Additional context
+
+Links to related issues, papers, or upstream discussions.

basalt_mesh-0.1/.github/PULL_REQUEST_TEMPLATE.md

@@ -0,0 +1,26 @@
+## Summary
+
+<!-- One or two sentences describing what this PR changes and why. -->
+
+## Related issues
+
+<!-- Links to issues, e.g. "Closes #42" or "Refs #17". -->
+
+## Changes
+
+<!-- Bullet list of the user-visible changes in this PR. -->
+
+## Testing
+
+<!--
+The public CI runs lint and the Sphinx build only — it does NOT run
+the test suite (which requires a Simmetrix SimModSuite license).
+Maintainers: confirm `pixi run build` and `pixi run pytest` pass locally
+before merging.
+-->
+
+- [ ] `pixi run build` succeeds locally against my SMS install
+- [ ] `pixi run pytest` passes locally
+- [ ] Lint passes (`ruff check .` and `ruff format --check .`)
+- [ ] Documentation updated where relevant
+- [ ] Changelog entry added (`docs/changelog.rst`)

basalt_mesh-0.1/.github/workflows/ci.yml

@@ -0,0 +1,40 @@
+name: CI
+
+on:
+  push:
+    branches: [main]
+  pull_request:
+
+jobs:
+  lint:
+    name: Lint (ruff)
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+      - uses: astral-sh/ruff-action@v3
+        with:
+          version: "0.12.10"
+          args: "check ."
+      - uses: astral-sh/ruff-action@v3
+        with:
+          version: "0.12.10"
+          args: "format --check ."
+
+  docs:
+    name: Sphinx docs build
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+      - uses: prefix-dev/setup-pixi@v0.8.1
+        with:
+          pixi-version: v0.64.0
+          cache: true
+          environments: docs
+      - name: Build Sphinx documentation
+        run: pixi run -e docs docs
+      - name: Upload built docs as artifact
+        uses: actions/upload-artifact@v4
+        with:
+          name: docs-html
+          path: docs/_build/html
+          retention-days: 14

basalt_mesh-0.1/.github/workflows/release.yml

@@ -0,0 +1,44 @@
+name: Publish to PyPI
+
+# Trusted Publisher flow: PyPI verifies our OIDC token against a configured
+# pending/active publisher on the project (owner=Thea-Energy, repo=basalt,
+# workflow=release.yml, environment=pypi). No API token is stored anywhere.
+# See https://docs.pypi.org/trusted-publishers/.
+#
+# Triggers:
+# - Publishing a GitHub Release (the standard path: tag + Release UI).
+# - Manual workflow_dispatch with an explicit ref input (used to publish
+#   tags that predate this workflow, e.g. v0.1).
+
+on:
+  release:
+    types: [published]
+  workflow_dispatch:
+    inputs:
+      ref:
+        description: 'Tag or branch to publish from (e.g. v0.1)'
+        required: true
+        default: 'main'
+
+jobs:
+  publish:
+    name: Build sdist and publish to PyPI
+    runs-on: ubuntu-latest
+    environment:
+      name: pypi
+      url: https://pypi.org/project/basalt-mesh/
+    permissions:
+      id-token: write
+    steps:
+      - uses: actions/checkout@v4
+        with:
+          ref: ${{ github.event.release.tag_name || inputs.ref }}
+      - uses: actions/setup-python@v5
+        with:
+          python-version: '3.12'
+      - name: Build sdist
+        run: |
+          python -m pip install --upgrade build
+          python -m build --sdist
+      - name: Publish to PyPI
+        uses: pypa/gh-action-pypi-publish@release/v1

basalt_mesh-0.1/.gitignore

@@ -0,0 +1,281 @@
+doc/
+docs/_build/
+docs/api/generated/
+docs/generated/
+include/
+lib/
+dist/
+wheelhouse/
+.cache/
+_deps/
+build/
+# Ignore CMake-generated artifacts in basalt/_core/, but keep the __init__.py
+# package marker (committed so scikit-build-core's editable install can register
+# `basalt._core` as a known module).
+basalt/_core/*
+!basalt/_core/__init__.py
+autogen/
+scratch/
+*.lock
+CLAUDE.md
+*.pdf
+*.json
+*.Identifier
+
+.envrc
+.vscode/
+
+*.msh
+*.sms
+*.smd
+*.x_t
+*.x_b
+*.prt
+*.step
+
+# Allow test data files tracked by Git LFS
+!tests/data/*.x_t
+!tests/data/*.json
+!tests/data/*.step
+*.brep
+*.log
+*.lic
+TheaEnergy*
+*.stl
+*.conda
+*.so
+*.pyi
+
+*.log# pixi environments
+.pixi/*
+!.pixi/config.toml
+
+ Created by https://www.toptal.com/developers/gitignore/api/python,c++,cmake
+# Edit at https://www.toptal.com/developers/gitignore?templates=python,c++,cmake
+
+### C++ ###
+# Prerequisites
+*.d
+
+# Compiled Object files
+*.slo
+*.lo
+*.o
+*.obj
+
+# Precompiled Headers
+*.gch
+*.pch
+
+# Compiled Dynamic libraries
+*.so
+*.dylib
+*.dll
+
+# Fortran module files
+*.mod
+*.smod
+
+# Compiled Static libraries
+*.lai
+*.la
+*.a
+*.lib
+
+# Executables
+*.exe
+*.out
+*.app
+
+### CMake ###
+CMakeLists.txt.user
+CMakeCache.txt
+CMakeFiles
+CMakeScripts
+Testing
+Makefile
+!docs/Makefile
+cmake_install.cmake
+install_manifest.txt
+compile_commands.json
+CTestTestfile.cmake
+_deps
+
+### CMake Patch ###
+CMakeUserPresets.json
+
+# External projects
+*-prefix/
+
+### Python ###
+# Byte-compiled / optimized / DLL files
+__pycache__/
+*.py[cod]
+*$py.class
+
+# C extensions
+
+# Distribution / packaging
+.Python
+build/
+develop-eggs/
+dist/
+downloads/
+eggs/
+.eggs/
+lib/
+lib64/
+parts/
+sdist/
+var/
+wheels/
+share/python-wheels/
+*.egg-info/
+.installed.cfg
+*.egg
+MANIFEST
+
+# PyInstaller
+#  Usually these files are written by a python script from a template
+#  before PyInstaller builds the exe, so as to inject date/other infos into it.
+*.manifest
+*.spec
+
+# Installer logs
+pip-log.txt
+pip-delete-this-directory.txt
+
+# Unit test / coverage reports
+htmlcov/
+.tox/
+.nox/
+.coverage
+.coverage.*
+.cache
+nosetests.xml
+coverage.xml
+*.cover
+*.py,cover
+.hypothesis/
+.pytest_cache/
+cover/
+
+# Translations
+*.mo
+*.pot
+
+# Django stuff:
+*.log
+local_settings.py
+db.sqlite3
+db.sqlite3-journal
+
+# Flask stuff:
+instance/
+.webassets-cache
+
+# Scrapy stuff:
+.scrapy
+
+# Sphinx documentation
+docs/_build/
+
+# PyBuilder
+.pybuilder/
+target/
+
+# Jupyter Notebook
+.ipynb_checkpoints
+
+# IPython
+profile_default/
+ipython_config.py
+
+# pyenv
+#   For a library or package, you might want to ignore these files since the code is
+#   intended to run in multiple environments; otherwise, check them in:
+# .python-version
+
+# pipenv
+#   According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
+#   However, in case of collaboration, if having platform-specific dependencies or dependencies
+#   having no cross-platform support, pipenv may install dependencies that don't work, or not
+#   install all needed dependencies.
+#Pipfile.lock
+
+# poetry
+#   Similar to Pipfile.lock, it is generally recommended to include poetry.lock in version control.
+#   This is especially recommended for binary packages to ensure reproducibility, and is more
+#   commonly ignored for libraries.
+#   https://python-poetry.org/docs/basic-usage/#commit-your-poetrylock-file-to-version-control
+#poetry.lock
+
+# pdm
+#   Similar to Pipfile.lock, it is generally recommended to include pdm.lock in version control.
+#pdm.lock
+#   pdm stores project-wide configurations in .pdm.toml, but it is recommended to not include it
+#   in version control.
+#   https://pdm.fming.dev/#use-with-ide
+.pdm.toml
+
+# PEP 582; used by e.g. github.com/David-OConnor/pyflow and github.com/pdm-project/pdm
+__pypackages__/
+
+# Celery stuff
+celerybeat-schedule
+celerybeat.pid
+
+# SageMath parsed files
+*.sage.py
+
+# Environments
+.env
+.venv
+env/
+venv/
+ENV/
+env.bak/
+venv.bak/
+
+# Spyder project settings
+.spyderproject
+.spyproject
+
+# Rope project settings
+.ropeproject
+
+# mkdocs documentation
+/site
+
+# mypy
+.mypy_cache/
+.dmypy.json
+dmypy.json
+
+# Pyre type checker
+.pyre/
+
+# pytype static type analyzer
+.pytype/
+
+# Cython debug symbols
+cython_debug/
+
+# PyCharm
+#  JetBrains specific template is maintained in a separate JetBrains.gitignore that can
+#  be found at https://github.com/github/gitignore/blob/main/Global/JetBrains.gitignore
+#  and can be added to the global gitignore or merged into this file.  For a more nuclear
+#  option (not recommended) you can uncomment the following to ignore the entire idea folder.
+#.idea/
+
+### Python Patch ###
+# Poetry local configuration file - https://python-poetry.org/docs/configuration/#local-configuration
+poetry.toml
+
+# ruff
+.ruff_cache/
+
+# LSP config files
+pyrightconfig.json
+
+# End of https://www.toptal.com/developers/gitignore/api/python,c++,cmake

basalt_mesh-0.1/.readthedocs.yaml

@@ -0,0 +1,23 @@
+# Read the Docs configuration file
+# https://docs.readthedocs.io/en/stable/config-file/v2.html
+
+version: 2
+
+build:
+  os: ubuntu-22.04
+  tools:
+    python: "3.12"
+  jobs:
+    post_create_environment:
+      - pip install pixi-cli
+    post_install:
+      - pixi install -e docs
+  commands:
+    - pixi run -e docs sphinx-build -b html docs $READTHEDOCS_OUTPUT/html
+
+sphinx:
+  configuration: docs/conf.py
+  fail_on_warning: false
+
+formats:
+  - htmlzip

basalt_mesh-0.1/CMakeLists.txt

@@ -0,0 +1,219 @@
+cmake_minimum_required(VERSION 3.15)
+
+project(basalt)
+
+set(SRC_DIR ${CMAKE_CURRENT_SOURCE_DIR}/src)
+
+set(CMAKE_POSITION_INDEPENDENT_CODE ON) # Resolves -fPIC errors
+
+include(FetchContent)
+set(FETCHCONTENT_BASE_DIR ${CMAKE_CURRENT_SOURCE_DIR}/_deps)
+set(FETCHCONTENT_QUIET TRUE)
+
+find_package(
+        Python 3.10
+        COMPONENTS Interpreter Development.Module
+        REQUIRED)
+
+
+# ===============================================================================
+# Nanobind
+# ===============================================================================
+execute_process(
+  COMMAND "${Python_EXECUTABLE}" -m nanobind --cmake_dir
+  OUTPUT_STRIP_TRAILING_WHITESPACE OUTPUT_VARIABLE nanobind_ROOT)
+find_package(nanobind CONFIG REQUIRED)
+
+
+# ===============================================================================
+# Simmetrix SimModSuite (bring-your-own)
+# ===============================================================================
+if(NOT DEFINED ENV{SIMMODSUITE_ROOT})
+    message(FATAL_ERROR
+        "SIMMODSUITE_ROOT environment variable is not set.\n"
+        "basalt does not bundle Simmetrix SimModSuite. Download the gmcore, mscore, pskrnl, "
+        "and simlicense tarballs from Simmetrix's customer portal (all at the same "
+        "version-datestamp), extract them into one parent directory, and set "
+        "SIMMODSUITE_ROOT to the resulting <version>-<datestamp>/ directory.\n"
+        "See docs/install.rst for full instructions.")
+endif()
+
+set(SIMMODSUITE_ROOT "$ENV{SIMMODSUITE_ROOT}" CACHE PATH "Simmetrix SimModSuite install root")
+
+if(DEFINED ENV{SIMMODSUITE_ABI})
+    set(SIMMODSUITE_ABI "$ENV{SIMMODSUITE_ABI}" CACHE STRING "Simmetrix ABI subdirectory")
+else()
+    set(SIMMODSUITE_ABI "x64_rhel9_gcc11" CACHE STRING "Simmetrix ABI subdirectory (default)")
+endif()
+
+set(SIMMODSUITE_INCLUDE "${SIMMODSUITE_ROOT}/include")
+set(SIMMODSUITE_LIB "${SIMMODSUITE_ROOT}/lib/${SIMMODSUITE_ABI}")
+
+if(NOT EXISTS "${SIMMODSUITE_INCLUDE}/SimUtil.h")
+    message(FATAL_ERROR
+        "Simmetrix headers not found at ${SIMMODSUITE_INCLUDE}/SimUtil.h. "
+        "Check SIMMODSUITE_ROOT and that all four module tarballs are extracted "
+        "into a unified install tree.")
+endif()
+
+if(NOT IS_DIRECTORY "${SIMMODSUITE_LIB}")
+    message(FATAL_ERROR
+        "Simmetrix library directory not found at ${SIMMODSUITE_LIB}. "
+        "Set SIMMODSUITE_ABI to your install's ABI subdirectory "
+        "(default: x64_rhel9_gcc11; alternatives: x64_rhel8_gcc83).")
+endif()
+
+# Glob-detect SimParasolid so version bumps (SimParasolid380 -> SimParasolid390 -> ...)
+# do not require build changes.
+file(GLOB SIM_PARASOLID_LIBS "${SIMMODSUITE_LIB}/libSimParasolid*.a")
+list(LENGTH SIM_PARASOLID_LIBS SIM_PARASOLID_COUNT)
+if(NOT SIM_PARASOLID_COUNT EQUAL 1)
+    message(FATAL_ERROR
+        "Expected exactly one libSimParasolid*.a in ${SIMMODSUITE_LIB}, "
+        "found ${SIM_PARASOLID_COUNT}: ${SIM_PARASOLID_LIBS}")
+endif()
+get_filename_component(SIM_PARASOLID_NAME "${SIM_PARASOLID_LIBS}" NAME_WE)
+string(REGEX REPLACE "^lib" "" SIM_PARASOLID_LIBNAME "${SIM_PARASOLID_NAME}")
+
+add_library(sms INTERFACE)
+target_include_directories(sms INTERFACE "${SIMMODSUITE_INCLUDE}")
+target_link_directories(sms INTERFACE
+    "${SIMMODSUITE_LIB}"
+    "${SIMMODSUITE_LIB}/psKrnl")
+
+set(SMS_LINK_LIBS
+    ${SIM_PARASOLID_LIBNAME}
+    SimPartitionedMesh
+    SimPartitionWrapper
+    SimMeshing
+    SimMeshTools
+    SimModel
+    pskernel
+    SimLicense)
+
+if(CMAKE_SYSTEM_NAME STREQUAL "Linux")
+    list(APPEND SMS_LINK_LIBS tirpc)
+endif()
+
+target_link_libraries(sms INTERFACE ${SMS_LINK_LIBS})
+
+# Compile-time default schema dir; init.cpp setenvs P_SCHEMA from this with
+# overwrite=0 (preserves customer override).
+target_compile_definitions(sms INTERFACE
+    PSKRNL_SCHEMA_DIR="${SIMMODSUITE_LIB}/psKrnl/schema")
+
+# ===============================================================================
+# Gmsh
+# ===============================================================================
+find_library(GMSH_LIB gmsh)
+if(NOT GMSH_LIB)
+  message(FATAL_ERROR "Could not find libgmsh")
+endif()
+get_filename_component(GMSH_LIBDIR "${GMSH_LIB}" DIRECTORY)
+
+find_path(GMSH_INC gmsh.h)
+if(NOT GMSH_INC)
+  message(FATAL_ERROR "Could not find gmsh.h")
+endif()
+
+include_directories(${GMSH_INC})
+
+
+# ===============================================================================
+# JSON
+# ===============================================================================
+find_package(nlohmann_json REQUIRED)
+
+# ===============================================================================
+# Logging
+# ===============================================================================
+set(SPDLOG_VERSION v1.12.0)
+FetchContent_Declare(
+        spdlog URL https://github.com/gabime/spdlog/archive/${SPDLOG_VERSION}.tar.gz)
+
+FetchContent_MakeAvailable(spdlog)
+
+# ===============================================================================
+# Main Library
+# ===============================================================================
+add_library(
+    main
+    src/init.cpp
+    src/basalt.cpp
+)
+target_include_directories(main PUBLIC ${SRC_DIR})
+target_link_libraries(main PUBLIC
+nanobind
+sms
+spdlog::spdlog
+${GMSH_LIB}
+nlohmann_json::nlohmann_json
+)
+
+# ===============================================================================
+# Python Bindings
+# ===============================================================================
+file(GLOB PYTHON_SOURCES ${SRC_DIR}/python/*.cpp)
+nanobind_add_module(_core NB_SHARED # STATIC is the default
+        ${PYTHON_SOURCES})
+
+# Each consumer sets CMAKE_INSTALL_PREFIX itself:
+#   - dev pixi `build` task installs with --prefix .
+#   - scikit-build-core installs into its temporary prefix and collects from there
+#   - pixi-build-python (which routes through scikit-build-core) likewise
+# $ORIGIN keeps _core.so finding sibling .so files inside basalt/_core/ regardless
+# of where the wheel is installed.
+
+# Inspect RPATH with: readelf -d basalt/_core/_core.cpython-*.so | grep RUNPATH
+set_property(
+        TARGET _core
+        APPEND
+        PROPERTY INSTALL_RPATH
+        "$ORIGIN:${GMSH_LIBDIR}:${SIMMODSUITE_LIB}/psKrnl")
+
+nanobind_add_stub(
+        _core_stub
+        MODULE
+        _core
+        OUTPUT
+        _core.pyi
+        PYTHON_PATH
+        "."
+        DEPENDS
+        _core)
+
+target_link_libraries(_core PRIVATE main)
+target_include_directories(_core PRIVATE ${SRC_DIR}/python)
+target_include_directories(_core PRIVATE ${SRC_DIR}/autogen)
+
+set(GEN_FILES
+basalt.h
+)
+foreach (SOURCE_FILE ${GEN_FILES})
+    get_filename_component(FILE_NAME ${SOURCE_FILE} NAME_WE)
+    set(INPUT_FILE "${CMAKE_CURRENT_SOURCE_DIR}/src/${SOURCE_FILE}")
+    set(OUTPUT_DIR "${CMAKE_CURRENT_SOURCE_DIR}/src/autogen")
+    set (OUTPUT_FILE "${OUTPUT_DIR}/bind_${FILE_NAME}.h")
+    list(APPEND GENERATED_FILES ${OUTPUT_FILE})
+
+    # nanobindgen does not create its output directory itself, and the sdist
+    # excludes the gitignored `src/autogen/` tree, so make sure the directory
+    # exists before invoking the generator.
+    file(MAKE_DIRECTORY ${OUTPUT_DIR})
+
+    add_custom_command(
+            OUTPUT ${OUTPUT_FILE}
+            COMMAND python -m nanobindgen -o ${OUTPUT_DIR}
+            ${INPUT_FILE}
+            DEPENDS ${INPUT_FILE} ${GEN_SCRIPT}
+            COMMENT "Generating bindings for ${SOURCE_FILE}")
+endforeach ()
+
+add_custom_target(generate_bindings DEPENDS ${GENERATED_FILES})
+add_dependencies(_core generate_bindings)
+
+# ===============================================================================
+# Install
+# ===============================================================================
+install(TARGETS _core nanobind DESTINATION "basalt/_core")
+install(FILES ${CMAKE_BINARY_DIR}/_core.pyi DESTINATION "basalt/_core" OPTIONAL)

basalt_mesh-0.1/CONTRIBUTING.md

@@ -0,0 +1,4 @@
+# Contributing
+
+See the rendered contribution guide at [docs/contributing.rst](docs/contributing.rst)
+or in the published documentation.