barcadia 3.2.0__tar.gz → 3.2.1__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {barcadia-3.2.0/src/barcadia.egg-info → barcadia-3.2.1}/PKG-INFO +7 -7
- {barcadia-3.2.0 → barcadia-3.2.1}/README.md +5 -5
- {barcadia-3.2.0 → barcadia-3.2.1}/pyproject.toml +2 -2
- {barcadia-3.2.0 → barcadia-3.2.1/src/barcadia.egg-info}/PKG-INFO +7 -7
- {barcadia-3.2.0 → barcadia-3.2.1}/LICENSE +0 -0
- {barcadia-3.2.0 → barcadia-3.2.1}/setup.cfg +0 -0
- {barcadia-3.2.0 → barcadia-3.2.1}/src/barcadia/__init__.py +0 -0
- {barcadia-3.2.0 → barcadia-3.2.1}/src/barcadia/cli.py +0 -0
- {barcadia-3.2.0 → barcadia-3.2.1}/src/barcadia/config_utils.py +0 -0
- {barcadia-3.2.0 → barcadia-3.2.1}/src/barcadia/filter_utils.py +0 -0
- {barcadia-3.2.0 → barcadia-3.2.1}/src/barcadia/generate_barcodes.py +0 -0
- {barcadia-3.2.0 → barcadia-3.2.1}/src/barcadia/tools/generate_random_sequences.py +0 -0
- {barcadia-3.2.0 → barcadia-3.2.1}/src/barcadia/tools/memory_benchmark.py +0 -0
- {barcadia-3.2.0 → barcadia-3.2.1}/src/barcadia/validate_barcodes.py +0 -0
- {barcadia-3.2.0 → barcadia-3.2.1}/src/barcadia.egg-info/SOURCES.txt +0 -0
- {barcadia-3.2.0 → barcadia-3.2.1}/src/barcadia.egg-info/dependency_links.txt +0 -0
- {barcadia-3.2.0 → barcadia-3.2.1}/src/barcadia.egg-info/entry_points.txt +0 -0
- {barcadia-3.2.0 → barcadia-3.2.1}/src/barcadia.egg-info/requires.txt +0 -0
- {barcadia-3.2.0 → barcadia-3.2.1}/src/barcadia.egg-info/top_level.txt +0 -0
@@ -1,10 +1,10 @@
|
|
1
1
|
Metadata-Version: 2.4
|
2
2
|
Name: barcadia
|
3
|
-
Version: 3.2.
|
3
|
+
Version: 3.2.1
|
4
4
|
Summary: A high-performance, memory-efficient toolkit for fast generation and validation of large-scale NGS barcodes
|
5
5
|
Author: Danting Jiang
|
6
6
|
License-Expression: Apache-2.0
|
7
|
-
Project-URL: Repository, https://github.com/
|
7
|
+
Project-URL: Repository, https://github.com/djiang0825/NGS_barcode
|
8
8
|
Project-URL: PyPI, https://pypi.org/project/barcadia/
|
9
9
|
Keywords: bioinformatics,NGS,barcodes
|
10
10
|
Classifier: Development Status :: 5 - Production/Stable
|
@@ -25,10 +25,10 @@ Requires-Dist: llvmlite==0.44.0
|
|
25
25
|
Requires-Dist: psutil==7.0.0
|
26
26
|
Dynamic: license-file
|
27
27
|
|
28
|
-
# Barcadia (v3.2.
|
28
|
+
# Barcadia (v3.2.1)
|
29
29
|
*Best-in-class toolkit for large-scale NGS barcode generation and validation*
|
30
30
|
|
31
|
-

|
32
32
|

|
33
33
|

|
34
34
|
|
@@ -211,7 +211,7 @@ pip install barcadia
|
|
211
211
|
|
212
212
|
#### Method 2: Install from Source (Development)
|
213
213
|
```bash
|
214
|
-
git clone https://github.com/
|
214
|
+
git clone https://github.com/djiang0825/NGS_barcode.git
|
215
215
|
cd barcadia
|
216
216
|
pip install -e .
|
217
217
|
```
|
@@ -454,8 +454,8 @@ If you use Barcadia in your research, please cite:
|
|
454
454
|
year={2025},
|
455
455
|
date={2025-09-12},
|
456
456
|
url={https://pypi.org/project/barcadia/},
|
457
|
-
note={Code repository: https://github.com/
|
458
|
-
version={3.2.
|
457
|
+
note={Code repository: https://github.com/djiang0825/NGS_barcode},
|
458
|
+
version={3.2.1}
|
459
459
|
}
|
460
460
|
```
|
461
461
|
|
@@ -1,7 +1,7 @@
|
|
1
|
-
# Barcadia (v3.2.
|
1
|
+
# Barcadia (v3.2.1)
|
2
2
|
*Best-in-class toolkit for large-scale NGS barcode generation and validation*
|
3
3
|
|
4
|
-

|
5
5
|

|
6
6
|

|
7
7
|
|
@@ -184,7 +184,7 @@ pip install barcadia
|
|
184
184
|
|
185
185
|
#### Method 2: Install from Source (Development)
|
186
186
|
```bash
|
187
|
-
git clone https://github.com/
|
187
|
+
git clone https://github.com/djiang0825/NGS_barcode.git
|
188
188
|
cd barcadia
|
189
189
|
pip install -e .
|
190
190
|
```
|
@@ -427,8 +427,8 @@ If you use Barcadia in your research, please cite:
|
|
427
427
|
year={2025},
|
428
428
|
date={2025-09-12},
|
429
429
|
url={https://pypi.org/project/barcadia/},
|
430
|
-
note={Code repository: https://github.com/
|
431
|
-
version={3.2.
|
430
|
+
note={Code repository: https://github.com/djiang0825/NGS_barcode},
|
431
|
+
version={3.2.1}
|
432
432
|
}
|
433
433
|
```
|
434
434
|
|
@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
|
|
4
4
|
|
5
5
|
[project]
|
6
6
|
name = "barcadia"
|
7
|
-
version = "3.2.
|
7
|
+
version = "3.2.1"
|
8
8
|
description = "A high-performance, memory-efficient toolkit for fast generation and validation of large-scale NGS barcodes"
|
9
9
|
readme = "README.md"
|
10
10
|
license = "Apache-2.0"
|
@@ -32,7 +32,7 @@ classifiers = [
|
|
32
32
|
]
|
33
33
|
|
34
34
|
[project.urls]
|
35
|
-
Repository = "https://github.com/
|
35
|
+
Repository = "https://github.com/djiang0825/NGS_barcode"
|
36
36
|
PyPI = "https://pypi.org/project/barcadia/"
|
37
37
|
|
38
38
|
[tool.setuptools]
|
@@ -1,10 +1,10 @@
|
|
1
1
|
Metadata-Version: 2.4
|
2
2
|
Name: barcadia
|
3
|
-
Version: 3.2.
|
3
|
+
Version: 3.2.1
|
4
4
|
Summary: A high-performance, memory-efficient toolkit for fast generation and validation of large-scale NGS barcodes
|
5
5
|
Author: Danting Jiang
|
6
6
|
License-Expression: Apache-2.0
|
7
|
-
Project-URL: Repository, https://github.com/
|
7
|
+
Project-URL: Repository, https://github.com/djiang0825/NGS_barcode
|
8
8
|
Project-URL: PyPI, https://pypi.org/project/barcadia/
|
9
9
|
Keywords: bioinformatics,NGS,barcodes
|
10
10
|
Classifier: Development Status :: 5 - Production/Stable
|
@@ -25,10 +25,10 @@ Requires-Dist: llvmlite==0.44.0
|
|
25
25
|
Requires-Dist: psutil==7.0.0
|
26
26
|
Dynamic: license-file
|
27
27
|
|
28
|
-
# Barcadia (v3.2.
|
28
|
+
# Barcadia (v3.2.1)
|
29
29
|
*Best-in-class toolkit for large-scale NGS barcode generation and validation*
|
30
30
|
|
31
|
-

|
32
32
|

|
33
33
|

|
34
34
|
|
@@ -211,7 +211,7 @@ pip install barcadia
|
|
211
211
|
|
212
212
|
#### Method 2: Install from Source (Development)
|
213
213
|
```bash
|
214
|
-
git clone https://github.com/
|
214
|
+
git clone https://github.com/djiang0825/NGS_barcode.git
|
215
215
|
cd barcadia
|
216
216
|
pip install -e .
|
217
217
|
```
|
@@ -454,8 +454,8 @@ If you use Barcadia in your research, please cite:
|
|
454
454
|
year={2025},
|
455
455
|
date={2025-09-12},
|
456
456
|
url={https://pypi.org/project/barcadia/},
|
457
|
-
note={Code repository: https://github.com/
|
458
|
-
version={3.2.
|
457
|
+
note={Code repository: https://github.com/djiang0825/NGS_barcode},
|
458
|
+
version={3.2.1}
|
459
459
|
}
|
460
460
|
```
|
461
461
|
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|