b3alien 0.0.1__tar.gz

b3alien-0.0.1/LICENSE

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+MIT License
+
+Copyright (c) 2025 Botanic Garden Meise
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.

b3alien-0.0.1/PKG-INFO

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+Metadata-Version: 2.4
+Name: b3alien
+Version: 0.0.1
+Summary: Calculating the CBD target 6.1 indicator from occurrence cubes
+Author-email: Maarten Trekels <maarten.trekels@plantentuinmeise.be>
+License: MIT
+Project-URL: homepage, https://github.com/mtrekels/b3alien
+Project-URL: repository, https://github.com/mtrekels/b3alien
+Project-URL: documentation, https://b3alien.readthedocs.io/
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+Dynamic: license-file
+
+# b3alien: a Python package to calculate the Target 6.1 headline indicator of the CBD
+
+
+## Introduction
+
+The historic Kunming-Montreal Global Biodiversity
+Framework, which supports the achievement of the
+Sustainable Development Goals and builds on the
+Convention on Biological Diversity’s (CBD) previous
+Strategic Plans, sets out an ambitious pathway to reach
+the global vision of a world living in harmony with nature
+by 2050. Among the Framework’s key elements are 23
+targets for 2030. In order to track the progress on the
+targets, a number of indicators were agreed upon for
+each target. The B3ALIEN software provides a technical
+solution to track Target 6: “Reduce the Introduction of
+Invasive Alien Species by 50% and Minimize Their
+Impact.” It mainly focusses on the headline indicator: rate
+of invasive alien species establishment, but can provide
+input to some of the complementary indicators.
+
+Decision makers at local, regional, national and
+international levels need accurate and reliable
+information about status, trends, threats, and they need
+data presented in an actionable and understandable
+format, with measures of uncertainty. Furthermore, we
+need synthesized data products that can be combined
+with other environmental data, such as climate, soil
+chemistry, land use, altitude... B3ALIEN is built upon the
+concept of data cubes developed in the Horizon Europe
+Biodiversity Building Blocks for Policy project (b-
+cubed.eu). It uses the solid foundations of the GBIF
+infrastructure, where tools such as the GBIF Taxonomic
+Backbone and the Global Registry of Introduced and
+Invasive Species are available by default. Readily available occurrence data is used to determine and estimate
+accurately the rate of introduction of alien species..
+
+## Architecture
+
+put schema here

b3alien-0.0.1/README.md

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+# b3alien: a Python package to calculate the Target 6.1 headline indicator of the CBD
+
+
+## Introduction
+
+The historic Kunming-Montreal Global Biodiversity
+Framework, which supports the achievement of the
+Sustainable Development Goals and builds on the
+Convention on Biological Diversity’s (CBD) previous
+Strategic Plans, sets out an ambitious pathway to reach
+the global vision of a world living in harmony with nature
+by 2050. Among the Framework’s key elements are 23
+targets for 2030. In order to track the progress on the
+targets, a number of indicators were agreed upon for
+each target. The B3ALIEN software provides a technical
+solution to track Target 6: “Reduce the Introduction of
+Invasive Alien Species by 50% and Minimize Their
+Impact.” It mainly focusses on the headline indicator: rate
+of invasive alien species establishment, but can provide
+input to some of the complementary indicators.
+
+Decision makers at local, regional, national and
+international levels need accurate and reliable
+information about status, trends, threats, and they need
+data presented in an actionable and understandable
+format, with measures of uncertainty. Furthermore, we
+need synthesized data products that can be combined
+with other environmental data, such as climate, soil
+chemistry, land use, altitude... B3ALIEN is built upon the
+concept of data cubes developed in the Horizon Europe
+Biodiversity Building Blocks for Policy project (b-
+cubed.eu). It uses the solid foundations of the GBIF
+infrastructure, where tools such as the GBIF Taxonomic
+Backbone and the Global Registry of Introduced and
+Invasive Species are available by default. Readily available occurrence data is used to determine and estimate
+accurately the rate of introduction of alien species..
+
+## Architecture
+
+put schema here

b3alien-0.0.1/b3alien/b3cube/__init__.py

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+"""
+
+Biodiversity data cube functions
+========================================
+
+"""
+
+from .b3cube import OccurrenceCube
+from .b3cube import plot_richness
+from .b3cube import cumulative_species
+from .b3cube import calculate_rate
+from .b3cube import get_survey_effort
+
+__all__ = [
+    "plot_richness",
+    "cumulative_species",
+    "plot_cumsum",
+    "filter_multiple_cells",
+    "filter_multiple_occ",
+    "calculate_rate",
+    "get_survey_effort"
+    # purposely exclude OccurrenceCube
+]