awslabs.healthlake-mcp-server 0.0.7__tar.gz → 0.0.8__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (39) hide show
  1. {awslabs_healthlake_mcp_server-0.0.7 → awslabs_healthlake_mcp_server-0.0.8}/Dockerfile +19 -22
  2. {awslabs_healthlake_mcp_server-0.0.7 → awslabs_healthlake_mcp_server-0.0.8}/PKG-INFO +1 -1
  3. {awslabs_healthlake_mcp_server-0.0.7 → awslabs_healthlake_mcp_server-0.0.8}/awslabs/healthlake_mcp_server/__init__.py +1 -1
  4. {awslabs_healthlake_mcp_server-0.0.7 → awslabs_healthlake_mcp_server-0.0.8}/pyproject.toml +1 -1
  5. awslabs_healthlake_mcp_server-0.0.8/uv-requirements.txt +23 -0
  6. {awslabs_healthlake_mcp_server-0.0.7 → awslabs_healthlake_mcp_server-0.0.8}/uv.lock +7 -7
  7. awslabs_healthlake_mcp_server-0.0.7/uv-requirements.txt +0 -27
  8. {awslabs_healthlake_mcp_server-0.0.7 → awslabs_healthlake_mcp_server-0.0.8}/.dockerignore +0 -0
  9. {awslabs_healthlake_mcp_server-0.0.7 → awslabs_healthlake_mcp_server-0.0.8}/.gitignore +0 -0
  10. {awslabs_healthlake_mcp_server-0.0.7 → awslabs_healthlake_mcp_server-0.0.8}/.python-version +0 -0
  11. {awslabs_healthlake_mcp_server-0.0.7 → awslabs_healthlake_mcp_server-0.0.8}/CHANGELOG.md +0 -0
  12. {awslabs_healthlake_mcp_server-0.0.7 → awslabs_healthlake_mcp_server-0.0.8}/CONTRIBUTING.md +0 -0
  13. {awslabs_healthlake_mcp_server-0.0.7 → awslabs_healthlake_mcp_server-0.0.8}/LICENSE +0 -0
  14. {awslabs_healthlake_mcp_server-0.0.7 → awslabs_healthlake_mcp_server-0.0.8}/NOTICE +0 -0
  15. {awslabs_healthlake_mcp_server-0.0.7 → awslabs_healthlake_mcp_server-0.0.8}/README.md +0 -0
  16. {awslabs_healthlake_mcp_server-0.0.7 → awslabs_healthlake_mcp_server-0.0.8}/awslabs/__init__.py +0 -0
  17. {awslabs_healthlake_mcp_server-0.0.7 → awslabs_healthlake_mcp_server-0.0.8}/awslabs/healthlake_mcp_server/fhir_operations.py +0 -0
  18. {awslabs_healthlake_mcp_server-0.0.7 → awslabs_healthlake_mcp_server-0.0.8}/awslabs/healthlake_mcp_server/main.py +0 -0
  19. {awslabs_healthlake_mcp_server-0.0.7 → awslabs_healthlake_mcp_server-0.0.8}/awslabs/healthlake_mcp_server/models.py +0 -0
  20. {awslabs_healthlake_mcp_server-0.0.7 → awslabs_healthlake_mcp_server-0.0.8}/awslabs/healthlake_mcp_server/server.py +0 -0
  21. {awslabs_healthlake_mcp_server-0.0.7 → awslabs_healthlake_mcp_server-0.0.8}/docker-healthcheck.sh +0 -0
  22. {awslabs_healthlake_mcp_server-0.0.7 → awslabs_healthlake_mcp_server-0.0.8}/examples/README.md +0 -0
  23. {awslabs_healthlake_mcp_server-0.0.7 → awslabs_healthlake_mcp_server-0.0.8}/examples/mcp_config.json +0 -0
  24. {awslabs_healthlake_mcp_server-0.0.7 → awslabs_healthlake_mcp_server-0.0.8}/tests/conftest.py +0 -0
  25. {awslabs_healthlake_mcp_server-0.0.7 → awslabs_healthlake_mcp_server-0.0.8}/tests/test_fhir_client_comprehensive.py +0 -0
  26. {awslabs_healthlake_mcp_server-0.0.7 → awslabs_healthlake_mcp_server-0.0.8}/tests/test_fhir_error_scenarios.py +0 -0
  27. {awslabs_healthlake_mcp_server-0.0.7 → awslabs_healthlake_mcp_server-0.0.8}/tests/test_fhir_operations.py +0 -0
  28. {awslabs_healthlake_mcp_server-0.0.7 → awslabs_healthlake_mcp_server-0.0.8}/tests/test_integration_mock_based.py +0 -0
  29. {awslabs_healthlake_mcp_server-0.0.7 → awslabs_healthlake_mcp_server-0.0.8}/tests/test_main.py +0 -0
  30. {awslabs_healthlake_mcp_server-0.0.7 → awslabs_healthlake_mcp_server-0.0.8}/tests/test_main_edge_cases.py +0 -0
  31. {awslabs_healthlake_mcp_server-0.0.7 → awslabs_healthlake_mcp_server-0.0.8}/tests/test_mcp_integration_coverage.py +0 -0
  32. {awslabs_healthlake_mcp_server-0.0.7 → awslabs_healthlake_mcp_server-0.0.8}/tests/test_models.py +0 -0
  33. {awslabs_healthlake_mcp_server-0.0.7 → awslabs_healthlake_mcp_server-0.0.8}/tests/test_models_edge_cases.py +0 -0
  34. {awslabs_healthlake_mcp_server-0.0.7 → awslabs_healthlake_mcp_server-0.0.8}/tests/test_readonly_mode.py +0 -0
  35. {awslabs_healthlake_mcp_server-0.0.7 → awslabs_healthlake_mcp_server-0.0.8}/tests/test_server_core.py +0 -0
  36. {awslabs_healthlake_mcp_server-0.0.7 → awslabs_healthlake_mcp_server-0.0.8}/tests/test_server_error_handling.py +0 -0
  37. {awslabs_healthlake_mcp_server-0.0.7 → awslabs_healthlake_mcp_server-0.0.8}/tests/test_server_mcp_handlers.py +0 -0
  38. {awslabs_healthlake_mcp_server-0.0.7 → awslabs_healthlake_mcp_server-0.0.8}/tests/test_server_toolhandler.py +0 -0
  39. {awslabs_healthlake_mcp_server-0.0.7 → awslabs_healthlake_mcp_server-0.0.8}/tests/test_server_validation.py +0 -0
@@ -13,7 +13,11 @@
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  # limitations under the License.
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  # dependabot should continue to update this to the latest hash.
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- FROM public.ecr.aws/docker/library/python:3.13-alpine@sha256:e7e041128ffc3e3600509f508e44d34ab08ff432bdb62ec508d01dfc5ca459f7 AS uv
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+ FROM public.ecr.aws/amazonlinux/amazonlinux@sha256:e27a70c006c68f0d194cc9b9624714d6ed8d979a94f60f7d31392f4c8294155b AS uv
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+
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+ # Install build dependencies needed for compiling packages
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+ RUN dnf install -y shadow-utils python3 python3-devel gcc && \
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+ dnf clean all
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  # Install the project into `/app`
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  WORKDIR /app
@@ -25,7 +29,7 @@ ENV UV_COMPILE_BYTECODE=1
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  ENV UV_LINK_MODE=copy
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  # Prefer the system python
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- ENV UV_PYTHON_PREFERENCE=only-system
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+ ENV UV_PYTHON_PREFERENCE=only-managed
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  # Run without updating the uv.lock file like running with `--frozen`
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  ENV UV_FROZEN=true
@@ -37,19 +41,10 @@ COPY pyproject.toml uv.lock uv-requirements.txt ./
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  ENV PIP_NO_CACHE_DIR=1 \
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  PIP_DISABLE_PIP_VERSION_CHECK=1
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- # Install system dependencies and Python package manager
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- RUN apk update && \
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- apk add --no-cache --virtual .build-deps \
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- build-base \
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- gcc \
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- musl-dev \
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- libffi-dev \
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- openssl-dev \
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- cargo
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-
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  # Install the project's dependencies using the lockfile and settings
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  RUN --mount=type=cache,target=/root/.cache/uv \
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- pip install --require-hashes --requirement uv-requirements.txt --no-cache-dir && \
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+ python3 -m ensurepip && \
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+ python3 -m pip install --require-hashes --requirement uv-requirements.txt --no-cache-dir && \
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  uv sync --python 3.13 --frozen --no-install-project --no-dev --no-editable
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  # Then, add the rest of the project source code and install it
@@ -61,20 +56,22 @@ RUN --mount=type=cache,target=/root/.cache/uv \
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  # Make the directory just in case it doesn't exist
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  RUN mkdir -p /root/.local
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58
 
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- FROM public.ecr.aws/docker/library/python:3.13-alpine@sha256:e7e041128ffc3e3600509f508e44d34ab08ff432bdb62ec508d01dfc5ca459f7
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+ FROM public.ecr.aws/amazonlinux/amazonlinux@sha256:e27a70c006c68f0d194cc9b9624714d6ed8d979a94f60f7d31392f4c8294155b
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60
 
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  # Place executables in the environment at the front of the path and include other binaries
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- ENV PATH="/app/.venv/bin:$PATH" \
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+ ENV PATH="/app/.venv/bin:$PATH:/usr/sbin" \
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  PYTHONUNBUFFERED=1
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64
 
70
- # Install runtime dependencies and create application user
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- RUN apk update && \
72
- apk add --no-cache ca-certificates && \
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- update-ca-certificates && \
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- addgroup -S app && \
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- adduser -S app -G app -h /app
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+ # Install other tools as needed for the MCP server
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+ # Add non-root user and ability to change directory into /root
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+ RUN dnf install -y shadow-utils procps && \
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+ dnf clean all && \
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+ groupadd --force --system app && \
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+ useradd app -g app -d /app && \
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+ chmod o+x /root
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- # Copy application artifacts from build stage
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+ # Get the project from the uv layer
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+ COPY --from=uv --chown=app:app /root/.local /root/.local
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  COPY --from=uv --chown=app:app /app/.venv /app/.venv
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  # Get healthcheck script
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
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  Name: awslabs.healthlake-mcp-server
3
- Version: 0.0.7
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+ Version: 0.0.8
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  Summary: An AWS Labs Model Context Protocol (MCP) server for healthlake
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  Project-URL: homepage, https://awslabs.github.io/mcp/
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  Project-URL: docs, https://awslabs.github.io/mcp/servers/healthlake-mcp-server/
@@ -14,4 +14,4 @@
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  """AWS HealthLake MCP Server."""
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- __version__ = '0.0.7'
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+ __version__ = '0.0.8'
@@ -2,7 +2,7 @@
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  name = "awslabs.healthlake-mcp-server"
3
3
 
4
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  # NOTE: "Patch"=9223372036854775807 bumps next release to zero.
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- version = "0.0.7"
5
+ version = "0.0.8"
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  description = "An AWS Labs Model Context Protocol (MCP) server for healthlake"
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  readme = "README.md"
@@ -0,0 +1,23 @@
1
+ # This file was autogenerated by uv via the following command:
2
+ # uv pip compile --generate-hashes --output-file=uv-requirements.txt --strip-extras uv-requirements.in
3
+ uv==0.9.24 \
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+ --hash=sha256:009cc82cdfc48add6ec13a0c4ffbb788ae2cab53573b4218069ca626721a404b \
5
+ --hash=sha256:15d3955bfb03a7b78aaf5afb639cedefdf0fc35ff844c92e3fe6e8700b94b84f \
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+ --hash=sha256:1914d33e526167dc202ec4a59119c68467b31f7c71dcf8b1077571d091ca3e7c \
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+ --hash=sha256:207c8a2d4c4d55589feb63b4be74f6ff6ab92fa81b14a6515007ccec5a868ae0 \
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+ --hash=sha256:38c59e18fe5fa42f7baeb4f08c94914cee6d87ff8faa6fc95c994dbc0de26c90 \
9
+ --hash=sha256:3b610d89d6025000d08cd9bd458c6e264003a0ecfdaa8e4eba28938130cd1837 \
10
+ --hash=sha256:44c0b8a78724e4cfa8e9c0266023c70fc792d0b39a5da17f5f847af2b530796b \
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+ --hash=sha256:488a07e59fb417bf86de5630197223b7a0223229e626afc124c26827db78cff8 \
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+ --hash=sha256:63a0a46693098cf8446e41bd5d9ce7d3bc9b775a63fe0c8405ab6ee328424d46 \
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+ --hash=sha256:6720c9939cca7daff3cccc35dd896bbe139d7d463c62cba8dbbc474ff8eb93d1 \
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+ --hash=sha256:68a3186074c03876ee06b68730d5ff69a430296760d917ebbbb8e3fb54fb4091 \
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+ --hash=sha256:69531d9a8772afb2dff68fef2469f666e4f8a0132b2109e36541c423415835da \
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+ --hash=sha256:75a000f529ec92235b10fb5e16ca41f23f46c643308fd6c5b0d7b73ca056c5b9 \
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+ --hash=sha256:841ede01d6dcf1676a21dce05f3647ba171c1d92768a03e8b8b6b7354b34a6d2 \
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+ --hash=sha256:8cd626306b415491f839b1a9100da6795c82c44d4cf278dd7ace7a774af89df4 \
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+ --hash=sha256:8d3c0fec7aa17f936a5b258816e856647b21f978a81bcfb2dc8caf2892a4965e \
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+ --hash=sha256:aafe7dd9b633672054cf27f1a8e4127506324631f1af5edd051728f4f8085351 \
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+ --hash=sha256:d59d31c25fc530c68db9164174efac511a25fc882cec49cd48f75a18e7ebd6d5 \
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+ --hash=sha256:d7d1333d9c21088c89cb284ef29fdf48dc2015fe993174a823a3e7c991db90f9
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+ # via -r uv-requirements.in (contents of `uv==0.9.24`)
@@ -37,7 +37,7 @@ wheels = [
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  [[package]]
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  name = "awslabs-healthlake-mcp-server"
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- version = "0.0.7"
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+ version = "0.0.8"
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  source = { editable = "." }
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  dependencies = [
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  { name = "boto3" },
@@ -456,11 +456,11 @@ wheels = [
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  [[package]]
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  name = "filelock"
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- version = "3.20.1"
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+ version = "3.20.3"
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  source = { registry = "https://pypi.org/simple" }
461
- sdist = { url = "https://files.pythonhosted.org/packages/a7/23/ce7a1126827cedeb958fc043d61745754464eb56c5937c35bbf2b8e26f34/filelock-3.20.1.tar.gz", hash = "sha256:b8360948b351b80f420878d8516519a2204b07aefcdcfd24912a5d33127f188c", size = 19476, upload-time = "2025-12-15T23:54:28.027Z" }
461
+ sdist = { url = "https://files.pythonhosted.org/packages/1d/65/ce7f1b70157833bf3cb851b556a37d4547ceafc158aa9b34b36782f23696/filelock-3.20.3.tar.gz", hash = "sha256:18c57ee915c7ec61cff0ecf7f0f869936c7c30191bb0cf406f1341778d0834e1", size = 19485, upload-time = "2026-01-09T17:55:05.421Z" }
462
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  wheels = [
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- { url = "https://files.pythonhosted.org/packages/e3/7f/a1a97644e39e7316d850784c642093c99df1290a460df4ede27659056834/filelock-3.20.1-py3-none-any.whl", hash = "sha256:15d9e9a67306188a44baa72f569d2bfd803076269365fdea0934385da4dc361a", size = 16666, upload-time = "2025-12-15T23:54:26.874Z" },
463
+ { url = "https://files.pythonhosted.org/packages/b5/36/7fb70f04bf00bc646cd5bb45aa9eddb15e19437a28b8fb2b4a5249fac770/filelock-3.20.3-py3-none-any.whl", hash = "sha256:4b0dda527ee31078689fc205ec4f1c1bf7d56cf88b6dc9426c4f230e46c2dce1", size = 16701, upload-time = "2026-01-09T17:55:04.334Z" },
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  ]
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  [[package]]
@@ -1357,7 +1357,7 @@ wheels = [
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  [[package]]
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  name = "virtualenv"
1360
- version = "20.34.0"
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+ version = "20.36.1"
1361
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  source = { registry = "https://pypi.org/simple" }
1362
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  dependencies = [
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  { name = "distlib" },
@@ -1365,9 +1365,9 @@ dependencies = [
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  { name = "platformdirs" },
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  { name = "typing-extensions", marker = "python_full_version < '3.11'" },
1367
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  ]
1368
- sdist = { url = "https://files.pythonhosted.org/packages/1c/14/37fcdba2808a6c615681cd216fecae00413c9dab44fb2e57805ecf3eaee3/virtualenv-20.34.0.tar.gz", hash = "sha256:44815b2c9dee7ed86e387b842a84f20b93f7f417f95886ca1996a72a4138eb1a", size = 6003808, upload-time = "2025-08-13T14:24:07.464Z" }
1368
+ sdist = { url = "https://files.pythonhosted.org/packages/aa/a3/4d310fa5f00863544e1d0f4de93bddec248499ccf97d4791bc3122c9d4f3/virtualenv-20.36.1.tar.gz", hash = "sha256:8befb5c81842c641f8ee658481e42641c68b5eab3521d8e092d18320902466ba", size = 6032239, upload-time = "2026-01-09T18:21:01.296Z" }
1369
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  wheels = [
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- { url = "https://files.pythonhosted.org/packages/76/06/04c8e804f813cf972e3262f3f8584c232de64f0cde9f703b46cf53a45090/virtualenv-20.34.0-py3-none-any.whl", hash = "sha256:341f5afa7eee943e4984a9207c025feedd768baff6753cd660c857ceb3e36026", size = 5983279, upload-time = "2025-08-13T14:24:05.111Z" },
1370
+ { url = "https://files.pythonhosted.org/packages/6a/2a/dc2228b2888f51192c7dc766106cd475f1b768c10caaf9727659726f7391/virtualenv-20.36.1-py3-none-any.whl", hash = "sha256:575a8d6b124ef88f6f51d56d656132389f961062a9177016a50e4f507bbcc19f", size = 6008258, upload-time = "2026-01-09T18:20:59.425Z" },
1371
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  ]
1372
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  [[package]]
@@ -1,27 +0,0 @@
1
- #
2
- # This file is autogenerated by pip-compile with Python 3.12
3
- # by the following command:
4
- #
5
- # pip-compile --generate-hashes --output-file=uv-requirements.txt --strip-extras uv-requirements.in
6
- #
7
- uv==0.9.6 \
8
- --hash=sha256:0169a85d3ba5ef1c37089d64ff26de573439ca84ecf549276a2eee42d7f833f2 \
9
- --hash=sha256:0fde18c22376c8b02954c7db3847bc75ac42619932c44b43f49d056e5cfb05f9 \
10
- --hash=sha256:166175ba952d2ad727e1dbd57d7cfc1782dfe7b8d79972174a46a7aa33ddceec \
11
- --hash=sha256:3c2c2b2b093330e603d838fec26941ab6f62e8d62a012f9fa0d5ed88da39d907 \
12
- --hash=sha256:538716ec97f8d899baa7e1c427f4411525459c0ef72ea9b3625ce9610c9976e6 \
13
- --hash=sha256:547fd27ab5da7cd1a833288a36858852451d416a056825f162ecf2af5be6f8b8 \
14
- --hash=sha256:62e3f057a9ae5e5003a7cd56b617e940f519f6dabcbb22d36cdd0149df25d409 \
15
- --hash=sha256:6403176b55388cf94fb8737e73b26ee2a7b1805a9139da5afa951210986d4fcd \
16
- --hash=sha256:7e89c964f614fa3f0481060cac709d6da50feac553e1e11227d6c4c81c87af7c \
17
- --hash=sha256:86e05782f9b75d39ab1c0af98bf11e87e646a36a61d425021d5b284073e56315 \
18
- --hash=sha256:90122a76e6441b8c580fc9faf06bd8c4dbe276cb1c185ad91eceb2afa78e492a \
19
- --hash=sha256:95a62c1f668272555ad0c446bf44a9924dee06054b831d04c162e0bad736dc28 \
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- --hash=sha256:a7c6067919d87208c4a6092033c3bc9799cb8be1c8bc6ef419a1f6d42a755329 \
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- --hash=sha256:b2f934737c93f88c906b6a47bcc083170210fe5d66565e80a7c139599e5cbf2f \
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- --hash=sha256:b31377ebf2d0499afc5abe3fe1abded5ca843f3a1161b432fe26eb0ce15bab8e \
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- --hash=sha256:d1072db92cc9525febdf9d113c23916dfc20ca03e21218cc7beefe7185a90631 \
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- --hash=sha256:e700b2098f9d365061c572d0729b4e8bc71c6468d83dfaae2537cd66e3cb1b98 \
25
- --hash=sha256:ea67369918af24ea7e01991dfc8b8988d1b0b7c49cb39d9e5bc0c409930a0a3f \
26
- --hash=sha256:f0ba311b3ca49d246f36d444d3ee81571619ef95e5f509eb694a81defcbed262
27
- # via -r uv-requirements.in (contents of `uv==0.9.6`)